Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2006:A526
Extra
PDB:
ATOM 1 O3' U A2005 39.425 129.446 89.318 1.00 29.29 O
ATOM 2 P A A2006 39.054 130.592 90.375 1.00 29.48 P
ATOM 3 OP1 A A2006 38.606 131.796 89.652 1.00 30.18 O
ATOM 4 OP2 A A2006 40.201 130.688 91.311 1.00 31.99 O
ATOM 5 O5' A A2006 37.826 130.004 91.204 1.00 30.05 O
ATOM 6 C5' A A2006 36.610 129.569 90.579 1.00 29.29 C
ATOM 7 C4' A A2006 35.794 128.748 91.552 1.00 32.29 C
ATOM 8 O4' A A2006 36.489 127.516 91.882 1.00 34.64 O
ATOM 9 C3' A A2006 35.550 129.423 92.892 1.00 32.96 C
ATOM 10 O3' A A2006 34.402 130.281 92.858 1.00 32.60 O
ATOM 11 C2' A A2006 35.326 128.248 93.831 1.00 34.14 C
ATOM 12 O2' A A2006 33.978 127.857 93.750 1.00 36.12 O
ATOM 13 C1' A A2006 36.240 127.168 93.237 1.00 34.35 C
ATOM 14 N9 A A2006 37.519 127.050 93.951 1.00 35.19 N
ATOM 15 C8 A A2006 38.729 127.585 93.613 1.00 36.08 C
ATOM 16 N7 A A2006 39.665 127.383 94.503 1.00 33.62 N
ATOM 17 C5 A A2006 39.037 126.648 95.484 1.00 34.65 C
ATOM 18 C6 A A2006 39.485 126.151 96.714 1.00 34.10 C
ATOM 19 N6 A A2006 40.700 126.364 97.197 1.00 33.93 N
ATOM 20 N1 A A2006 38.625 125.440 97.451 1.00 35.66 N
ATOM 21 C2 A A2006 37.384 125.275 96.987 1.00 36.49 C
ATOM 22 N3 A A2006 36.835 125.721 95.862 1.00 36.47 N
ATOM 23 C4 A A2006 37.725 126.409 95.146 1.00 35.12 C
ATOM 24 P C A2007 34.393 131.638 93.720 1.00 32.41 P
ATOM 25 OP1 C A2007 33.253 132.469 93.294 1.00 33.78 O
ATOM 26 OP2 C A2007 35.762 132.187 93.644 1.00 32.89 O
ATOM 27 O5' C A2007 34.080 131.129 95.194 1.00 32.93 O
TER
ATOM 1 O3' G B 525 30.253 121.561 95.554 1.00 31.34 O
ATOM 2 P C B 526 28.681 121.836 95.490 1.00 28.74 P
ATOM 3 OP1 C B 526 28.057 120.782 96.300 1.00 29.57 O
ATOM 4 OP2 C B 526 28.359 121.952 94.060 1.00 30.03 O
ATOM 5 O5' C B 526 28.521 123.275 96.137 1.00 27.35 O
ATOM 6 C5' C B 526 27.256 123.755 96.608 1.00 31.53 C
ATOM 7 C4' C B 526 26.974 125.146 96.040 1.00 35.60 C
ATOM 8 O4' C B 526 27.933 126.146 96.470 1.00 36.13 O
ATOM 9 C3' C B 526 26.933 125.296 94.535 1.00 34.86 C
ATOM 10 O3' C B 526 26.132 126.424 94.236 1.00 36.21 O
ATOM 11 C2' C B 526 28.374 125.618 94.214 1.00 34.08 C
ATOM 12 O2' C B 526 28.504 126.259 92.966 1.00 34.12 O
ATOM 13 C1' C B 526 28.758 126.528 95.387 1.00 34.95 C
ATOM 14 N1 C B 526 30.163 126.306 95.800 1.00 36.05 N
ATOM 15 C2 C B 526 31.186 126.449 94.852 1.00 35.15 C
ATOM 16 O2 C B 526 30.908 126.818 93.705 1.00 36.86 O
ATOM 17 N3 C B 526 32.447 126.182 95.213 1.00 34.03 N
ATOM 18 C4 C B 526 32.724 125.806 96.461 1.00 34.60 C
ATOM 19 N4 C B 526 33.995 125.554 96.765 1.00 35.69 N
ATOM 20 C5 C B 526 31.716 125.673 97.451 1.00 36.65 C
ATOM 21 C6 C B 526 30.463 125.933 97.084 1.00 36.36 C
ATOM 22 P G B 527 24.614 126.229 93.767 1.00 35.86 P
ATOM 23 OP1 G B 527 24.250 127.435 93.005 1.00 38.74 O
ATOM 24 OP2 G B 527 23.786 125.788 94.900 1.00 35.80 O
ATOM 25 O5' G B 527 24.679 125.019 92.759 1.00 36.20 O
TER
ATOM 2 P A A2006 39.054 130.592 90.375 1.00 29.48 P
ATOM 3 OP1 A A2006 38.606 131.796 89.652 1.00 30.18 O
ATOM 4 OP2 A A2006 40.201 130.688 91.311 1.00 31.99 O
ATOM 5 O5' A A2006 37.826 130.004 91.204 1.00 30.05 O
ATOM 6 C5' A A2006 36.610 129.569 90.579 1.00 29.29 C
ATOM 7 C4' A A2006 35.794 128.748 91.552 1.00 32.29 C
ATOM 8 O4' A A2006 36.489 127.516 91.882 1.00 34.64 O
ATOM 9 C3' A A2006 35.550 129.423 92.892 1.00 32.96 C
ATOM 10 O3' A A2006 34.402 130.281 92.858 1.00 32.60 O
ATOM 11 C2' A A2006 35.326 128.248 93.831 1.00 34.14 C
ATOM 12 O2' A A2006 33.978 127.857 93.750 1.00 36.12 O
ATOM 13 C1' A A2006 36.240 127.168 93.237 1.00 34.35 C
ATOM 14 N9 A A2006 37.519 127.050 93.951 1.00 35.19 N
ATOM 15 C8 A A2006 38.729 127.585 93.613 1.00 36.08 C
ATOM 16 N7 A A2006 39.665 127.383 94.503 1.00 33.62 N
ATOM 17 C5 A A2006 39.037 126.648 95.484 1.00 34.65 C
ATOM 18 C6 A A2006 39.485 126.151 96.714 1.00 34.10 C
ATOM 19 N6 A A2006 40.700 126.364 97.197 1.00 33.93 N
ATOM 20 N1 A A2006 38.625 125.440 97.451 1.00 35.66 N
ATOM 21 C2 A A2006 37.384 125.275 96.987 1.00 36.49 C
ATOM 22 N3 A A2006 36.835 125.721 95.862 1.00 36.47 N
ATOM 23 C4 A A2006 37.725 126.409 95.146 1.00 35.12 C
ATOM 24 P C A2007 34.393 131.638 93.720 1.00 32.41 P
ATOM 25 OP1 C A2007 33.253 132.469 93.294 1.00 33.78 O
ATOM 26 OP2 C A2007 35.762 132.187 93.644 1.00 32.89 O
ATOM 27 O5' C A2007 34.080 131.129 95.194 1.00 32.93 O
TER
ATOM 1 O3' G B 525 30.253 121.561 95.554 1.00 31.34 O
ATOM 2 P C B 526 28.681 121.836 95.490 1.00 28.74 P
ATOM 3 OP1 C B 526 28.057 120.782 96.300 1.00 29.57 O
ATOM 4 OP2 C B 526 28.359 121.952 94.060 1.00 30.03 O
ATOM 5 O5' C B 526 28.521 123.275 96.137 1.00 27.35 O
ATOM 6 C5' C B 526 27.256 123.755 96.608 1.00 31.53 C
ATOM 7 C4' C B 526 26.974 125.146 96.040 1.00 35.60 C
ATOM 8 O4' C B 526 27.933 126.146 96.470 1.00 36.13 O
ATOM 9 C3' C B 526 26.933 125.296 94.535 1.00 34.86 C
ATOM 10 O3' C B 526 26.132 126.424 94.236 1.00 36.21 O
ATOM 11 C2' C B 526 28.374 125.618 94.214 1.00 34.08 C
ATOM 12 O2' C B 526 28.504 126.259 92.966 1.00 34.12 O
ATOM 13 C1' C B 526 28.758 126.528 95.387 1.00 34.95 C
ATOM 14 N1 C B 526 30.163 126.306 95.800 1.00 36.05 N
ATOM 15 C2 C B 526 31.186 126.449 94.852 1.00 35.15 C
ATOM 16 O2 C B 526 30.908 126.818 93.705 1.00 36.86 O
ATOM 17 N3 C B 526 32.447 126.182 95.213 1.00 34.03 N
ATOM 18 C4 C B 526 32.724 125.806 96.461 1.00 34.60 C
ATOM 19 N4 C B 526 33.995 125.554 96.765 1.00 35.69 N
ATOM 20 C5 C B 526 31.716 125.673 97.451 1.00 36.65 C
ATOM 21 C6 C B 526 30.463 125.933 97.084 1.00 36.36 C
ATOM 22 P G B 527 24.614 126.229 93.767 1.00 35.86 P
ATOM 23 OP1 G B 527 24.250 127.435 93.005 1.00 38.74 O
ATOM 24 OP2 G B 527 23.786 125.788 94.900 1.00 35.80 O
ATOM 25 O5' G B 527 24.679 125.019 92.759 1.00 36.20 O
TER
Atoms:
OP1: (38.606,131.796,89.652)
OP2: (40.201,130.688,91.311)
C3': (35.550,129.423,92.892)
C1': (36.240,127.168,93.237)
C5': (36.610,129.569,90.579)
O4': (36.489,127.516,91.882)
C8: (38.729,127.585,93.613)
O2': (33.978,127.857,93.750)
C6: (39.485,126.151,96.714)
C5: (39.037,126.648,95.484)
C4: (37.725,126.409,95.146)
P: (39.054,130.592,90.375)
C4': (35.794,128.748,91.552)
C2': (35.326,128.248,93.831)
C2: (37.384,125.275,96.987)
N1: (38.625,125.440,97.451)
N3: (36.835,125.721,95.862)
N6: (40.700,126.364,97.197)
N7: (39.665,127.383,94.503)
N9: (37.519,127.050,93.951)
O5': (37.826,130.004,91.204)
O3': (34.402,130.281,92.858)
OP2: (40.201,130.688,91.311)
C3': (35.550,129.423,92.892)
C1': (36.240,127.168,93.237)
C5': (36.610,129.569,90.579)
O4': (36.489,127.516,91.882)
C8: (38.729,127.585,93.613)
O2': (33.978,127.857,93.750)
C6: (39.485,126.151,96.714)
C5: (39.037,126.648,95.484)
C4: (37.725,126.409,95.146)
P: (39.054,130.592,90.375)
C4': (35.794,128.748,91.552)
C2': (35.326,128.248,93.831)
C2: (37.384,125.275,96.987)
N1: (38.625,125.440,97.451)
N3: (36.835,125.721,95.862)
N6: (40.700,126.364,97.197)
N7: (39.665,127.383,94.503)
N9: (37.519,127.050,93.951)
O5': (37.826,130.004,91.204)
O3': (34.402,130.281,92.858)
C2: (31.186,126.449,94.852)
OP1: (28.057,120.782,96.300)
OP2: (28.359,121.952,94.060)
C4: (32.724,125.806,96.461)
O5': (28.521,123.275,96.137)
C3': (26.933,125.296,94.535)
C1': (28.758,126.528,95.387)
O4': (27.933,126.146,96.470)
C5': (27.256,123.755,96.608)
P: (28.681,121.836,95.490)
O2: (30.908,126.818,93.705)
C4': (26.974,125.146,96.040)
C2': (28.374,125.618,94.214)
O2': (28.504,126.259,92.966)
N1: (30.163,126.306,95.800)
N3: (32.447,126.182,95.213)
N4: (33.995,125.554,96.765)
C6: (30.463,125.933,97.084)
C5: (31.716,125.673,97.451)
O3': (26.132,126.424,94.236)
OP1: (28.057,120.782,96.300)
OP2: (28.359,121.952,94.060)
C4: (32.724,125.806,96.461)
O5': (28.521,123.275,96.137)
C3': (26.933,125.296,94.535)
C1': (28.758,126.528,95.387)
O4': (27.933,126.146,96.470)
C5': (27.256,123.755,96.608)
P: (28.681,121.836,95.490)
O2: (30.908,126.818,93.705)
C4': (26.974,125.146,96.040)
C2': (28.374,125.618,94.214)
O2': (28.504,126.259,92.966)
N1: (30.163,126.306,95.800)
N3: (32.447,126.182,95.213)
N4: (33.995,125.554,96.765)
C6: (30.463,125.933,97.084)
C5: (31.716,125.673,97.451)
O3': (26.132,126.424,94.236)
Image (generated by PyMOL):