ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:070:087

Extra

PDB:
ATOM 1 O3' G A 69 27.880 154.651 21.988 1.00 42.06 O
ATOM 2 P A A 70 26.722 155.691 21.596 1.00 42.39 P
ATOM 3 OP1 A A 70 25.404 155.115 21.963 1.00 40.42 O
ATOM 4 OP2 A A 70 26.968 156.118 20.197 1.00 45.49 O
ATOM 5 O5' A A 70 26.995 156.933 22.553 1.00 41.75 O
ATOM 6 C5' A A 70 27.192 156.740 23.961 1.00 42.83 C
ATOM 7 C4' A A 70 27.669 158.015 24.609 1.00 42.93 C
ATOM 8 O4' A A 70 28.929 158.422 24.007 1.00 43.55 O
ATOM 9 C3' A A 70 26.740 159.212 24.481 1.00 42.56 C
ATOM 10 O3' A A 70 26.917 160.025 25.630 1.00 43.95 O
ATOM 11 C2' A A 70 27.311 159.936 23.268 1.00 43.08 C
ATOM 12 O2' A A 70 26.989 161.313 23.220 1.00 43.79 O
ATOM 13 C1' A A 70 28.805 159.732 23.499 1.00 42.54 C
ATOM 14 N9 A A 70 29.653 159.848 22.317 1.00 41.87 N
ATOM 15 C8 A A 70 29.477 159.297 21.072 1.00 42.56 C
ATOM 16 N7 A A 70 30.445 159.571 20.232 1.00 42.65 N
ATOM 17 C5 A A 70 31.314 160.359 20.973 1.00 42.69 C
ATOM 18 C6 A A 70 32.538 160.964 20.658 1.00 42.23 C
ATOM 19 N6 A A 70 33.124 160.868 19.463 1.00 43.45 N
ATOM 20 N1 A A 70 33.152 161.679 21.625 1.00 42.09 N
ATOM 21 C2 A A 70 32.561 161.779 22.820 1.00 42.81 C
ATOM 22 N3 A A 70 31.410 161.260 23.236 1.00 43.17 N
ATOM 23 C4 A A 70 30.832 160.547 22.254 1.00 42.58 C
ATOM 24 P G A 71 26.030 159.761 26.937 1.00 47.35 P
ATOM 25 OP1 G A 71 24.840 158.953 26.543 1.00 46.21 O
ATOM 26 OP2 G A 71 25.845 161.057 27.643 1.00 45.21 O
ATOM 27 O5' G A 71 26.956 158.833 27.837 1.00 47.63 O
TER

ATOM 1 O3' A B 86 38.323 164.703 13.691 1.00 58.50 O
ATOM 2 P G B 87 38.052 163.128 13.763 1.00 57.76 P
ATOM 3 OP1 G B 87 39.309 162.435 14.162 1.00 57.93 O
ATOM 4 OP2 G B 87 37.393 162.770 12.487 1.00 58.28 O
ATOM 5 O5' G B 87 36.970 162.970 14.922 1.00 56.96 O
ATOM 6 C5' G B 87 37.327 163.119 16.311 1.00 55.18 C
ATOM 7 C4' G B 87 36.765 161.968 17.117 1.00 53.83 C
ATOM 8 O4' G B 87 35.313 161.982 17.035 1.00 53.97 O
ATOM 9 C3' G B 87 37.191 160.586 16.641 1.00 52.69 C
ATOM 10 O3' G B 87 37.215 159.702 17.750 1.00 50.63 O
ATOM 11 C2' G B 87 36.070 160.209 15.681 1.00 53.36 C
ATOM 12 O2' G B 87 35.949 158.813 15.498 1.00 52.45 O
ATOM 13 C1' G B 87 34.854 160.807 16.392 1.00 54.78 C
ATOM 14 N9 G B 87 33.760 161.188 15.501 1.00 57.09 N
ATOM 15 C8 G B 87 33.854 161.898 14.328 1.00 57.65 C
ATOM 16 N7 G B 87 32.700 162.095 13.753 1.00 58.48 N
ATOM 17 C5 G B 87 31.787 161.476 14.592 1.00 59.99 C
ATOM 18 C6 G B 87 30.375 161.350 14.482 1.00 61.61 C
ATOM 19 O6 G B 87 29.627 161.776 13.590 1.00 63.64 O
ATOM 20 N1 G B 87 29.841 160.642 15.554 1.00 61.42 N
ATOM 21 C2 G B 87 30.568 160.124 16.596 1.00 61.56 C
ATOM 22 N2 G B 87 29.871 159.481 17.537 1.00 62.78 N
ATOM 23 N3 G B 87 31.882 160.229 16.708 1.00 61.02 N
ATOM 24 C4 G B 87 32.424 160.912 15.677 1.00 59.32 C
ATOM 25 P A B 88 38.574 158.943 18.136 1.00 48.90 P
ATOM 26 OP1 A B 88 39.669 159.412 17.244 1.00 48.91 O
ATOM 27 OP2 A B 88 38.272 157.498 18.218 1.00 49.10 O
ATOM 28 O5' A B 88 38.879 159.470 19.603 1.00 47.47 O
TER

Atoms:
OP1: (25.404,155.115,21.963)
OP2: (26.968,156.118,20.197)
C3': (26.740,159.212,24.481)
C1': (28.805,159.732,23.499)
C5': (27.192,156.740,23.961)
O4': (28.929,158.422,24.007)
C8: (29.477,159.297,21.072)
O2': (26.989,161.313,23.220)
C6: (32.538,160.964,20.658)
C5: (31.314,160.359,20.973)
C4: (30.832,160.547,22.254)
P: (26.722,155.691,21.596)
C4': (27.669,158.015,24.609)
C2': (27.311,159.936,23.268)
C2: (32.561,161.779,22.820)
N1: (33.152,161.679,21.625)
N3: (31.410,161.260,23.236)
N6: (33.124,160.868,19.463)
N7: (30.445,159.571,20.232)
N9: (29.653,159.848,22.317)
O5': (26.995,156.933,22.553)
O3': (26.917,160.025,25.630)
OP1: (39.309,162.435,14.162)
OP2: (37.393,162.770,12.487)
C3': (37.191,160.586,16.641)
C1': (34.854,160.807,16.392)
C5': (37.327,163.119,16.311)
O6: (29.627,161.776,13.590)
O4': (35.313,161.982,17.035)
C8: (33.854,161.898,14.328)
C2: (30.568,160.124,16.596)
C6: (30.375,161.350,14.482)
C5: (31.787,161.476,14.592)
C4: (32.424,160.912,15.677)
P: (38.052,163.128,13.763)
C4': (36.765,161.968,17.117)
C2': (36.070,160.209,15.681)
O2': (35.949,158.813,15.498)
N1: (29.841,160.642,15.554)
N2: (29.871,159.481,17.537)
N3: (31.882,160.229,16.708)
N7: (32.700,162.095,13.753)
N9: (33.760,161.188,15.501)
O5': (36.970,162.970,14.922)
O3': (37.215,159.702,17.750)
Image (generated by PyMOL):
PyMOL image
show in jmol