ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:0407:01878

Extra

PDB:
ATOM 1 O3' C A 406 83.666 85.522 33.706 1.00 50.46 O
ATOM 2 P A A 407 84.242 85.295 32.221 1.00 50.87 P
ATOM 3 OP1 A A 407 84.525 86.631 31.642 1.00 51.40 O
ATOM 4 OP2 A A 407 83.339 84.358 31.496 1.00 51.46 O
ATOM 5 O5' A A 407 85.629 84.556 32.464 1.00 48.74 O
ATOM 6 C5' A A 407 86.737 85.256 33.036 1.00 48.75 C
ATOM 7 C4' A A 407 87.934 84.348 33.113 1.00 50.91 C
ATOM 8 O4' A A 407 87.648 83.251 34.017 1.00 51.03 O
ATOM 9 C3' A A 407 88.307 83.676 31.803 1.00 51.28 C
ATOM 10 O3' A A 407 89.133 84.533 31.029 1.00 54.45 O
ATOM 11 C2' A A 407 89.044 82.438 32.283 1.00 50.19 C
ATOM 12 O2' A A 407 90.351 82.753 32.707 1.00 48.57 O
ATOM 13 C1' A A 407 88.202 82.053 33.504 1.00 50.07 C
ATOM 14 N9 A A 407 87.093 81.157 33.179 1.00 49.35 N
ATOM 15 C8 A A 407 85.784 81.494 32.916 1.00 48.65 C
ATOM 16 N7 A A 407 85.016 80.466 32.659 1.00 48.42 N
ATOM 17 C5 A A 407 85.873 79.377 32.762 1.00 47.03 C
ATOM 18 C6 A A 407 85.669 77.998 32.607 1.00 45.45 C
ATOM 19 N6 A A 407 84.487 77.452 32.315 1.00 44.32 N
ATOM 20 N1 A A 407 86.735 77.186 32.764 1.00 45.29 N
ATOM 21 C2 A A 407 87.920 77.731 33.059 1.00 46.46 C
ATOM 22 N3 A A 407 88.237 79.009 33.236 1.00 47.63 N
ATOM 23 C4 A A 407 87.155 79.789 33.074 1.00 47.75 C
ATOM 24 P U A 408 89.031 84.518 29.424 1.00 55.86 P
ATOM 25 OP1 U A 408 89.865 85.661 28.967 1.00 56.00 O
ATOM 26 OP2 U A 408 87.601 84.438 29.012 1.00 53.05 O
ATOM 27 O5' U A 408 89.778 83.174 29.012 1.00 54.52 O
TER

ATOM 1 O3' A B1877 97.849 76.772 29.878 1.00 75.34 O
ATOM 2 P C B1878 98.344 77.351 31.293 1.00 73.24 P
ATOM 3 OP1 C B1878 99.829 77.370 31.308 1.00 73.45 O
ATOM 4 OP2 C B1878 97.614 76.607 32.349 1.00 74.20 O
ATOM 5 O5' C B1878 97.844 78.862 31.286 1.00 71.48 O
ATOM 6 C5' C B1878 98.536 79.862 30.520 1.00 69.69 C
ATOM 7 C4' C B1878 97.815 81.184 30.617 1.00 69.08 C
ATOM 8 O4' C B1878 96.484 81.042 30.065 1.00 70.53 O
ATOM 9 C3' C B1878 97.588 81.713 32.022 1.00 67.71 C
ATOM 10 O3' C B1878 98.727 82.430 32.468 1.00 66.16 O
ATOM 11 C2' C B1878 96.387 82.632 31.837 1.00 68.51 C
ATOM 12 O2' C B1878 96.735 83.890 31.301 1.00 66.75 O
ATOM 13 C1' C B1878 95.580 81.868 30.785 1.00 70.43 C
ATOM 14 N1 C B1878 94.482 81.032 31.320 1.00 72.11 N
ATOM 15 C2 C B1878 93.339 81.662 31.838 1.00 72.26 C
ATOM 16 O2 C B1878 93.294 82.908 31.868 1.00 72.90 O
ATOM 17 N3 C B1878 92.317 80.899 32.293 1.00 72.27 N
ATOM 18 C4 C B1878 92.404 79.567 32.250 1.00 72.31 C
ATOM 19 N4 C B1878 91.364 78.855 32.695 1.00 72.76 N
ATOM 20 C5 C B1878 93.558 78.904 31.746 1.00 71.90 C
ATOM 21 C6 C B1878 94.563 79.665 31.299 1.00 71.85 C
ATOM 22 P A B1879 99.074 82.492 34.033 1.00 67.53 P
ATOM 23 OP1 A B1879 100.058 83.595 34.218 1.00 67.50 O
ATOM 24 OP2 A B1879 99.435 81.115 34.456 1.00 67.44 O
ATOM 25 O5' A B1879 97.701 82.916 34.734 1.00 66.67 O
TER

Atoms:
OP1: (84.525,86.631,31.642)
OP2: (83.339,84.358,31.496)
C3': (88.307,83.676,31.803)
C1': (88.202,82.053,33.504)
C5': (86.737,85.256,33.036)
O4': (87.648,83.251,34.017)
C8: (85.784,81.494,32.916)
O2': (90.351,82.753,32.707)
C6: (85.669,77.998,32.607)
C5: (85.873,79.377,32.762)
C4: (87.155,79.789,33.074)
P: (84.242,85.295,32.221)
C4': (87.934,84.348,33.113)
C2': (89.044,82.438,32.283)
C2: (87.920,77.731,33.059)
N1: (86.735,77.186,32.764)
N3: (88.237,79.009,33.236)
N6: (84.487,77.452,32.315)
N7: (85.016,80.466,32.659)
N9: (87.093,81.157,33.179)
O5': (85.629,84.556,32.464)
O3': (89.133,84.533,31.029)
C2: (93.339,81.662,31.838)
OP1: (99.829,77.370,31.308)
OP2: (97.614,76.607,32.349)
C4: (92.404,79.567,32.250)
O5': (97.844,78.862,31.286)
C3': (97.588,81.713,32.022)
C1': (95.580,81.868,30.785)
O4': (96.484,81.042,30.065)
C5': (98.536,79.862,30.520)
P: (98.344,77.351,31.293)
O2: (93.294,82.908,31.868)
C4': (97.815,81.184,30.617)
C2': (96.387,82.632,31.837)
O2': (96.735,83.890,31.301)
N1: (94.482,81.032,31.320)
N3: (92.317,80.899,32.293)
N4: (91.364,78.855,32.695)
C6: (94.563,79.665,31.299)
C5: (93.558,78.904,31.746)
O3': (98.727,82.430,32.468)
Image (generated by PyMOL):
PyMOL image
show in jmol