Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0407:01878
Extra
PDB:
ATOM 1 O3' C A 406 83.620 85.429 33.766 1.00 48.31 O
ATOM 2 P A A 407 84.183 85.193 32.275 1.00 48.51 P
ATOM 3 OP1 A A 407 84.478 86.526 31.703 1.00 49.72 O
ATOM 4 OP2 A A 407 83.267 84.271 31.552 1.00 49.71 O
ATOM 5 O5' A A 407 85.569 84.451 32.502 1.00 46.51 O
ATOM 6 C5' A A 407 86.677 85.151 33.072 1.00 47.31 C
ATOM 7 C4' A A 407 87.872 84.241 33.159 1.00 49.30 C
ATOM 8 O4' A A 407 87.578 83.143 34.055 1.00 49.41 O
ATOM 9 C3' A A 407 88.254 83.569 31.855 1.00 50.62 C
ATOM 10 O3' A A 407 89.072 84.428 31.083 1.00 53.93 O
ATOM 11 C2' A A 407 89.007 82.347 32.344 1.00 49.81 C
ATOM 12 O2' A A 407 90.300 82.708 32.774 1.00 50.24 O
ATOM 13 C1' A A 407 88.161 81.953 33.557 1.00 48.59 C
ATOM 14 N9 A A 407 87.072 81.031 33.229 1.00 47.61 N
ATOM 15 C8 A A 407 85.749 81.330 32.989 1.00 47.14 C
ATOM 16 N7 A A 407 85.013 80.282 32.714 1.00 45.94 N
ATOM 17 C5 A A 407 85.906 79.222 32.780 1.00 45.51 C
ATOM 18 C6 A A 407 85.750 77.842 32.588 1.00 44.48 C
ATOM 19 N6 A A 407 84.587 77.260 32.289 1.00 43.52 N
ATOM 20 N1 A A 407 86.844 77.066 32.718 1.00 44.45 N
ATOM 21 C2 A A 407 88.011 77.643 33.024 1.00 43.52 C
ATOM 22 N3 A A 407 88.285 78.922 33.234 1.00 44.56 N
ATOM 23 C4 A A 407 87.177 79.669 33.095 1.00 45.74 C
ATOM 24 P U A 408 88.969 84.403 29.483 1.00 53.91 P
ATOM 25 OP1 U A 408 89.795 85.547 29.009 1.00 53.21 O
ATOM 26 OP2 U A 408 87.535 84.311 29.088 1.00 52.34 O
ATOM 27 O5' U A 408 89.730 83.064 29.093 1.00 52.84 O
TER
ATOM 1 O3' A B1877 97.760 76.842 29.856 1.00 72.72 O
ATOM 2 P C B1878 98.279 77.351 31.291 1.00 71.08 P
ATOM 3 OP1 C B1878 99.767 77.314 31.297 1.00 70.85 O
ATOM 4 OP2 C B1878 97.528 76.597 32.321 1.00 72.33 O
ATOM 5 O5' C B1878 97.822 78.875 31.357 1.00 69.11 O
ATOM 6 C5' C B1878 98.528 79.891 30.625 1.00 66.59 C
ATOM 7 C4' C B1878 97.784 81.202 30.705 1.00 65.37 C
ATOM 8 O4' C B1878 96.460 81.029 30.145 1.00 66.13 O
ATOM 9 C3' C B1878 97.531 81.738 32.104 1.00 64.29 C
ATOM 10 O3' C B1878 98.651 82.484 32.559 1.00 62.75 O
ATOM 11 C2' C B1878 96.316 82.634 31.899 1.00 64.92 C
ATOM 12 O2' C B1878 96.645 83.886 31.344 1.00 65.58 O
ATOM 13 C1' C B1878 95.538 81.852 30.842 1.00 66.60 C
ATOM 14 N1 C B1878 94.432 81.018 31.361 1.00 68.19 N
ATOM 15 C2 C B1878 93.271 81.655 31.831 1.00 68.22 C
ATOM 16 O2 C B1878 93.224 82.903 31.841 1.00 68.08 O
ATOM 17 N3 C B1878 92.235 80.897 32.263 1.00 68.05 N
ATOM 18 C4 C B1878 92.326 79.565 32.247 1.00 67.82 C
ATOM 19 N4 C B1878 91.271 78.861 32.665 1.00 67.21 N
ATOM 20 C5 C B1878 93.500 78.895 31.798 1.00 67.56 C
ATOM 21 C6 C B1878 94.519 79.651 31.370 1.00 67.61 C
ATOM 22 P A B1879 99.019 82.507 34.120 1.00 63.32 P
ATOM 23 OP1 A B1879 100.010 83.595 34.334 1.00 63.34 O
ATOM 24 OP2 A B1879 99.364 81.117 34.504 1.00 64.00 O
ATOM 25 O5' A B1879 97.661 82.928 34.842 1.00 62.17 O
TER
ATOM 2 P A A 407 84.183 85.193 32.275 1.00 48.51 P
ATOM 3 OP1 A A 407 84.478 86.526 31.703 1.00 49.72 O
ATOM 4 OP2 A A 407 83.267 84.271 31.552 1.00 49.71 O
ATOM 5 O5' A A 407 85.569 84.451 32.502 1.00 46.51 O
ATOM 6 C5' A A 407 86.677 85.151 33.072 1.00 47.31 C
ATOM 7 C4' A A 407 87.872 84.241 33.159 1.00 49.30 C
ATOM 8 O4' A A 407 87.578 83.143 34.055 1.00 49.41 O
ATOM 9 C3' A A 407 88.254 83.569 31.855 1.00 50.62 C
ATOM 10 O3' A A 407 89.072 84.428 31.083 1.00 53.93 O
ATOM 11 C2' A A 407 89.007 82.347 32.344 1.00 49.81 C
ATOM 12 O2' A A 407 90.300 82.708 32.774 1.00 50.24 O
ATOM 13 C1' A A 407 88.161 81.953 33.557 1.00 48.59 C
ATOM 14 N9 A A 407 87.072 81.031 33.229 1.00 47.61 N
ATOM 15 C8 A A 407 85.749 81.330 32.989 1.00 47.14 C
ATOM 16 N7 A A 407 85.013 80.282 32.714 1.00 45.94 N
ATOM 17 C5 A A 407 85.906 79.222 32.780 1.00 45.51 C
ATOM 18 C6 A A 407 85.750 77.842 32.588 1.00 44.48 C
ATOM 19 N6 A A 407 84.587 77.260 32.289 1.00 43.52 N
ATOM 20 N1 A A 407 86.844 77.066 32.718 1.00 44.45 N
ATOM 21 C2 A A 407 88.011 77.643 33.024 1.00 43.52 C
ATOM 22 N3 A A 407 88.285 78.922 33.234 1.00 44.56 N
ATOM 23 C4 A A 407 87.177 79.669 33.095 1.00 45.74 C
ATOM 24 P U A 408 88.969 84.403 29.483 1.00 53.91 P
ATOM 25 OP1 U A 408 89.795 85.547 29.009 1.00 53.21 O
ATOM 26 OP2 U A 408 87.535 84.311 29.088 1.00 52.34 O
ATOM 27 O5' U A 408 89.730 83.064 29.093 1.00 52.84 O
TER
ATOM 1 O3' A B1877 97.760 76.842 29.856 1.00 72.72 O
ATOM 2 P C B1878 98.279 77.351 31.291 1.00 71.08 P
ATOM 3 OP1 C B1878 99.767 77.314 31.297 1.00 70.85 O
ATOM 4 OP2 C B1878 97.528 76.597 32.321 1.00 72.33 O
ATOM 5 O5' C B1878 97.822 78.875 31.357 1.00 69.11 O
ATOM 6 C5' C B1878 98.528 79.891 30.625 1.00 66.59 C
ATOM 7 C4' C B1878 97.784 81.202 30.705 1.00 65.37 C
ATOM 8 O4' C B1878 96.460 81.029 30.145 1.00 66.13 O
ATOM 9 C3' C B1878 97.531 81.738 32.104 1.00 64.29 C
ATOM 10 O3' C B1878 98.651 82.484 32.559 1.00 62.75 O
ATOM 11 C2' C B1878 96.316 82.634 31.899 1.00 64.92 C
ATOM 12 O2' C B1878 96.645 83.886 31.344 1.00 65.58 O
ATOM 13 C1' C B1878 95.538 81.852 30.842 1.00 66.60 C
ATOM 14 N1 C B1878 94.432 81.018 31.361 1.00 68.19 N
ATOM 15 C2 C B1878 93.271 81.655 31.831 1.00 68.22 C
ATOM 16 O2 C B1878 93.224 82.903 31.841 1.00 68.08 O
ATOM 17 N3 C B1878 92.235 80.897 32.263 1.00 68.05 N
ATOM 18 C4 C B1878 92.326 79.565 32.247 1.00 67.82 C
ATOM 19 N4 C B1878 91.271 78.861 32.665 1.00 67.21 N
ATOM 20 C5 C B1878 93.500 78.895 31.798 1.00 67.56 C
ATOM 21 C6 C B1878 94.519 79.651 31.370 1.00 67.61 C
ATOM 22 P A B1879 99.019 82.507 34.120 1.00 63.32 P
ATOM 23 OP1 A B1879 100.010 83.595 34.334 1.00 63.34 O
ATOM 24 OP2 A B1879 99.364 81.117 34.504 1.00 64.00 O
ATOM 25 O5' A B1879 97.661 82.928 34.842 1.00 62.17 O
TER
Atoms:
OP1: (84.478,86.526,31.703)
OP2: (83.267,84.271,31.552)
C3': (88.254,83.569,31.855)
C1': (88.161,81.953,33.557)
C5': (86.677,85.151,33.072)
O4': (87.578,83.143,34.055)
C8: (85.749,81.330,32.989)
O2': (90.300,82.708,32.774)
C6: (85.750,77.842,32.588)
C5: (85.906,79.222,32.780)
C4: (87.177,79.669,33.095)
P: (84.183,85.193,32.275)
C4': (87.872,84.241,33.159)
C2': (89.007,82.347,32.344)
C2: (88.011,77.643,33.024)
N1: (86.844,77.066,32.718)
N3: (88.285,78.922,33.234)
N6: (84.587,77.260,32.289)
N7: (85.013,80.282,32.714)
N9: (87.072,81.031,33.229)
O5': (85.569,84.451,32.502)
O3': (89.072,84.428,31.083)
OP2: (83.267,84.271,31.552)
C3': (88.254,83.569,31.855)
C1': (88.161,81.953,33.557)
C5': (86.677,85.151,33.072)
O4': (87.578,83.143,34.055)
C8: (85.749,81.330,32.989)
O2': (90.300,82.708,32.774)
C6: (85.750,77.842,32.588)
C5: (85.906,79.222,32.780)
C4: (87.177,79.669,33.095)
P: (84.183,85.193,32.275)
C4': (87.872,84.241,33.159)
C2': (89.007,82.347,32.344)
C2: (88.011,77.643,33.024)
N1: (86.844,77.066,32.718)
N3: (88.285,78.922,33.234)
N6: (84.587,77.260,32.289)
N7: (85.013,80.282,32.714)
N9: (87.072,81.031,33.229)
O5': (85.569,84.451,32.502)
O3': (89.072,84.428,31.083)
C2: (93.271,81.655,31.831)
OP1: (99.767,77.314,31.297)
OP2: (97.528,76.597,32.321)
C4: (92.326,79.565,32.247)
O5': (97.822,78.875,31.357)
C3': (97.531,81.738,32.104)
C1': (95.538,81.852,30.842)
O4': (96.460,81.029,30.145)
C5': (98.528,79.891,30.625)
P: (98.279,77.351,31.291)
O2: (93.224,82.903,31.841)
C4': (97.784,81.202,30.705)
C2': (96.316,82.634,31.899)
O2': (96.645,83.886,31.344)
N1: (94.432,81.018,31.361)
N3: (92.235,80.897,32.263)
N4: (91.271,78.861,32.665)
C6: (94.519,79.651,31.370)
C5: (93.500,78.895,31.798)
O3': (98.651,82.484,32.559)
OP1: (99.767,77.314,31.297)
OP2: (97.528,76.597,32.321)
C4: (92.326,79.565,32.247)
O5': (97.822,78.875,31.357)
C3': (97.531,81.738,32.104)
C1': (95.538,81.852,30.842)
O4': (96.460,81.029,30.145)
C5': (98.528,79.891,30.625)
P: (98.279,77.351,31.291)
O2: (93.224,82.903,31.841)
C4': (97.784,81.202,30.705)
C2': (96.316,82.634,31.899)
O2': (96.645,83.886,31.344)
N1: (94.432,81.018,31.361)
N3: (92.235,80.897,32.263)
N4: (91.271,78.861,32.665)
C6: (94.519,79.651,31.370)
C5: (93.500,78.895,31.798)
O3': (98.651,82.484,32.559)
Image (generated by PyMOL):