Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0407:01878
Extra
PDB:
ATOM 1 O3' C A 406 83.842 85.805 33.976 1.00 57.20 O
ATOM 2 P A A 407 84.432 85.548 32.497 1.00 59.67 P
ATOM 3 OP1 A A 407 84.721 86.875 31.897 1.00 59.30 O
ATOM 4 OP2 A A 407 83.529 84.602 31.780 1.00 59.11 O
ATOM 5 O5' A A 407 85.813 84.809 32.770 1.00 56.90 O
ATOM 6 C5' A A 407 86.921 85.530 33.315 1.00 59.55 C
ATOM 7 C4' A A 407 88.130 84.641 33.390 1.00 62.68 C
ATOM 8 O4' A A 407 87.860 83.552 34.306 1.00 63.54 O
ATOM 9 C3' A A 407 88.513 83.956 32.088 1.00 64.67 C
ATOM 10 O3' A A 407 89.319 84.807 31.286 1.00 68.70 O
ATOM 11 C2' A A 407 89.274 82.739 32.584 1.00 64.05 C
ATOM 12 O2' A A 407 90.582 83.078 33.001 1.00 64.02 O
ATOM 13 C1' A A 407 88.433 82.357 33.806 1.00 62.99 C
ATOM 14 N9 A A 407 87.337 81.448 33.477 1.00 61.86 N
ATOM 15 C8 A A 407 86.033 81.762 33.159 1.00 60.73 C
ATOM 16 N7 A A 407 85.284 80.717 32.916 1.00 59.43 N
ATOM 17 C5 A A 407 86.148 79.643 33.087 1.00 60.33 C
ATOM 18 C6 A A 407 85.966 78.258 32.975 1.00 60.30 C
ATOM 19 N6 A A 407 84.796 77.686 32.673 1.00 60.30 N
ATOM 20 N1 A A 407 87.038 77.465 33.194 1.00 59.83 N
ATOM 21 C2 A A 407 88.206 78.037 33.510 1.00 58.60 C
ATOM 22 N3 A A 407 88.499 79.321 33.656 1.00 58.48 N
ATOM 23 C4 A A 407 87.415 80.080 33.427 1.00 60.11 C
ATOM 24 P U A 408 89.263 84.688 29.686 1.00 70.36 P
ATOM 25 OP1 U A 408 90.121 85.792 29.166 1.00 69.55 O
ATOM 26 OP2 U A 408 87.841 84.586 29.244 1.00 69.73 O
ATOM 27 O5' U A 408 90.006 83.311 29.395 1.00 69.83 O
TER
ATOM 1 O3' A B1877 98.193 76.947 30.331 1.00 85.41 O
ATOM 2 P C B1878 98.772 77.685 31.639 1.00 84.29 P
ATOM 3 OP1 C B1878 100.249 77.742 31.496 1.00 83.32 O
ATOM 4 OP2 C B1878 98.182 77.024 32.827 1.00 85.13 O
ATOM 5 O5' C B1878 98.205 79.174 31.547 1.00 82.58 O
ATOM 6 C5' C B1878 98.931 80.194 30.836 1.00 81.30 C
ATOM 7 C4' C B1878 98.267 81.542 31.010 1.00 80.45 C
ATOM 8 O4' C B1878 96.936 81.506 30.439 1.00 81.67 O
ATOM 9 C3' C B1878 98.062 82.034 32.435 1.00 78.86 C
ATOM 10 O3' C B1878 99.236 82.697 32.894 1.00 76.71 O
ATOM 11 C2' C B1878 96.914 83.026 32.279 1.00 79.46 C
ATOM 12 O2' C B1878 97.341 84.290 31.820 1.00 78.06 O
ATOM 13 C1' C B1878 96.081 82.367 31.177 1.00 81.00 C
ATOM 14 N1 C B1878 94.916 81.595 31.652 1.00 82.02 N
ATOM 15 C2 C B1878 93.786 82.291 32.100 1.00 82.23 C
ATOM 16 O2 C B1878 93.808 83.537 32.116 1.00 82.11 O
ATOM 17 N3 C B1878 92.700 81.588 32.504 1.00 83.09 N
ATOM 18 C4 C B1878 92.714 80.250 32.470 1.00 82.60 C
ATOM 19 N4 C B1878 91.610 79.600 32.855 1.00 81.93 N
ATOM 20 C5 C B1878 93.856 79.520 32.036 1.00 82.00 C
ATOM 21 C6 C B1878 94.924 80.224 31.643 1.00 82.57 C
ATOM 22 P A B1879 99.531 82.820 34.467 1.00 76.76 P
ATOM 23 OP1 A B1879 100.436 83.990 34.657 1.00 74.37 O
ATOM 24 OP2 A B1879 99.972 81.473 34.925 1.00 76.41 O
ATOM 25 O5' A B1879 98.113 83.187 35.112 1.00 76.26 O
TER
ATOM 2 P A A 407 84.432 85.548 32.497 1.00 59.67 P
ATOM 3 OP1 A A 407 84.721 86.875 31.897 1.00 59.30 O
ATOM 4 OP2 A A 407 83.529 84.602 31.780 1.00 59.11 O
ATOM 5 O5' A A 407 85.813 84.809 32.770 1.00 56.90 O
ATOM 6 C5' A A 407 86.921 85.530 33.315 1.00 59.55 C
ATOM 7 C4' A A 407 88.130 84.641 33.390 1.00 62.68 C
ATOM 8 O4' A A 407 87.860 83.552 34.306 1.00 63.54 O
ATOM 9 C3' A A 407 88.513 83.956 32.088 1.00 64.67 C
ATOM 10 O3' A A 407 89.319 84.807 31.286 1.00 68.70 O
ATOM 11 C2' A A 407 89.274 82.739 32.584 1.00 64.05 C
ATOM 12 O2' A A 407 90.582 83.078 33.001 1.00 64.02 O
ATOM 13 C1' A A 407 88.433 82.357 33.806 1.00 62.99 C
ATOM 14 N9 A A 407 87.337 81.448 33.477 1.00 61.86 N
ATOM 15 C8 A A 407 86.033 81.762 33.159 1.00 60.73 C
ATOM 16 N7 A A 407 85.284 80.717 32.916 1.00 59.43 N
ATOM 17 C5 A A 407 86.148 79.643 33.087 1.00 60.33 C
ATOM 18 C6 A A 407 85.966 78.258 32.975 1.00 60.30 C
ATOM 19 N6 A A 407 84.796 77.686 32.673 1.00 60.30 N
ATOM 20 N1 A A 407 87.038 77.465 33.194 1.00 59.83 N
ATOM 21 C2 A A 407 88.206 78.037 33.510 1.00 58.60 C
ATOM 22 N3 A A 407 88.499 79.321 33.656 1.00 58.48 N
ATOM 23 C4 A A 407 87.415 80.080 33.427 1.00 60.11 C
ATOM 24 P U A 408 89.263 84.688 29.686 1.00 70.36 P
ATOM 25 OP1 U A 408 90.121 85.792 29.166 1.00 69.55 O
ATOM 26 OP2 U A 408 87.841 84.586 29.244 1.00 69.73 O
ATOM 27 O5' U A 408 90.006 83.311 29.395 1.00 69.83 O
TER
ATOM 1 O3' A B1877 98.193 76.947 30.331 1.00 85.41 O
ATOM 2 P C B1878 98.772 77.685 31.639 1.00 84.29 P
ATOM 3 OP1 C B1878 100.249 77.742 31.496 1.00 83.32 O
ATOM 4 OP2 C B1878 98.182 77.024 32.827 1.00 85.13 O
ATOM 5 O5' C B1878 98.205 79.174 31.547 1.00 82.58 O
ATOM 6 C5' C B1878 98.931 80.194 30.836 1.00 81.30 C
ATOM 7 C4' C B1878 98.267 81.542 31.010 1.00 80.45 C
ATOM 8 O4' C B1878 96.936 81.506 30.439 1.00 81.67 O
ATOM 9 C3' C B1878 98.062 82.034 32.435 1.00 78.86 C
ATOM 10 O3' C B1878 99.236 82.697 32.894 1.00 76.71 O
ATOM 11 C2' C B1878 96.914 83.026 32.279 1.00 79.46 C
ATOM 12 O2' C B1878 97.341 84.290 31.820 1.00 78.06 O
ATOM 13 C1' C B1878 96.081 82.367 31.177 1.00 81.00 C
ATOM 14 N1 C B1878 94.916 81.595 31.652 1.00 82.02 N
ATOM 15 C2 C B1878 93.786 82.291 32.100 1.00 82.23 C
ATOM 16 O2 C B1878 93.808 83.537 32.116 1.00 82.11 O
ATOM 17 N3 C B1878 92.700 81.588 32.504 1.00 83.09 N
ATOM 18 C4 C B1878 92.714 80.250 32.470 1.00 82.60 C
ATOM 19 N4 C B1878 91.610 79.600 32.855 1.00 81.93 N
ATOM 20 C5 C B1878 93.856 79.520 32.036 1.00 82.00 C
ATOM 21 C6 C B1878 94.924 80.224 31.643 1.00 82.57 C
ATOM 22 P A B1879 99.531 82.820 34.467 1.00 76.76 P
ATOM 23 OP1 A B1879 100.436 83.990 34.657 1.00 74.37 O
ATOM 24 OP2 A B1879 99.972 81.473 34.925 1.00 76.41 O
ATOM 25 O5' A B1879 98.113 83.187 35.112 1.00 76.26 O
TER
Atoms:
OP1: (84.721,86.875,31.897)
OP2: (83.529,84.602,31.780)
C3': (88.513,83.956,32.088)
C1': (88.433,82.357,33.806)
C5': (86.921,85.530,33.315)
O4': (87.860,83.552,34.306)
C8: (86.033,81.762,33.159)
O2': (90.582,83.078,33.001)
C6: (85.966,78.258,32.975)
C5: (86.148,79.643,33.087)
C4: (87.415,80.080,33.427)
P: (84.432,85.548,32.497)
C4': (88.130,84.641,33.390)
C2': (89.274,82.739,32.584)
C2: (88.206,78.037,33.510)
N1: (87.038,77.465,33.194)
N3: (88.499,79.321,33.656)
N6: (84.796,77.686,32.673)
N7: (85.284,80.717,32.916)
N9: (87.337,81.448,33.477)
O5': (85.813,84.809,32.770)
O3': (89.319,84.807,31.286)
OP2: (83.529,84.602,31.780)
C3': (88.513,83.956,32.088)
C1': (88.433,82.357,33.806)
C5': (86.921,85.530,33.315)
O4': (87.860,83.552,34.306)
C8: (86.033,81.762,33.159)
O2': (90.582,83.078,33.001)
C6: (85.966,78.258,32.975)
C5: (86.148,79.643,33.087)
C4: (87.415,80.080,33.427)
P: (84.432,85.548,32.497)
C4': (88.130,84.641,33.390)
C2': (89.274,82.739,32.584)
C2: (88.206,78.037,33.510)
N1: (87.038,77.465,33.194)
N3: (88.499,79.321,33.656)
N6: (84.796,77.686,32.673)
N7: (85.284,80.717,32.916)
N9: (87.337,81.448,33.477)
O5': (85.813,84.809,32.770)
O3': (89.319,84.807,31.286)
C2: (93.786,82.291,32.100)
OP1: (100.249,77.742,31.496)
OP2: (98.182,77.024,32.827)
C4: (92.714,80.250,32.470)
O5': (98.205,79.174,31.547)
C3': (98.062,82.034,32.435)
C1': (96.081,82.367,31.177)
O4': (96.936,81.506,30.439)
C5': (98.931,80.194,30.836)
P: (98.772,77.685,31.639)
O2: (93.808,83.537,32.116)
C4': (98.267,81.542,31.010)
C2': (96.914,83.026,32.279)
O2': (97.341,84.290,31.820)
N1: (94.916,81.595,31.652)
N3: (92.700,81.588,32.504)
N4: (91.610,79.600,32.855)
C6: (94.924,80.224,31.643)
C5: (93.856,79.520,32.036)
O3': (99.236,82.697,32.894)
OP1: (100.249,77.742,31.496)
OP2: (98.182,77.024,32.827)
C4: (92.714,80.250,32.470)
O5': (98.205,79.174,31.547)
C3': (98.062,82.034,32.435)
C1': (96.081,82.367,31.177)
O4': (96.936,81.506,30.439)
C5': (98.931,80.194,30.836)
P: (98.772,77.685,31.639)
O2: (93.808,83.537,32.116)
C4': (98.267,81.542,31.010)
C2': (96.914,83.026,32.279)
O2': (97.341,84.290,31.820)
N1: (94.916,81.595,31.652)
N3: (92.700,81.588,32.504)
N4: (91.610,79.600,32.855)
C6: (94.924,80.224,31.643)
C5: (93.856,79.520,32.036)
O3': (99.236,82.697,32.894)
Image (generated by PyMOL):