Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02006:0526
Extra
PDB:
ATOM 1 O3' U A2005 39.557 129.714 89.237 1.00 38.36 O
ATOM 2 P A A2006 39.168 130.863 90.288 1.00 41.21 P
ATOM 3 OP1 A A2006 38.638 132.016 89.522 1.00 39.99 O
ATOM 4 OP2 A A2006 40.321 131.070 91.199 1.00 41.73 O
ATOM 5 O5' A A2006 37.998 130.207 91.149 1.00 38.29 O
ATOM 6 C5' A A2006 36.798 129.742 90.527 1.00 36.03 C
ATOM 7 C4' A A2006 35.951 128.989 91.520 1.00 38.79 C
ATOM 8 O4' A A2006 36.597 127.742 91.884 1.00 39.81 O
ATOM 9 C3' A A2006 35.674 129.682 92.846 1.00 37.95 C
ATOM 10 O3' A A2006 34.556 130.546 92.727 1.00 39.39 O
ATOM 11 C2' A A2006 35.325 128.507 93.742 1.00 38.94 C
ATOM 12 O2' A A2006 34.000 128.088 93.495 1.00 39.60 O
ATOM 13 C1' A A2006 36.304 127.439 93.241 1.00 39.42 C
ATOM 14 N9 A A2006 37.566 127.425 93.981 1.00 39.54 N
ATOM 15 C8 A A2006 38.734 128.067 93.654 1.00 38.35 C
ATOM 16 N7 A A2006 39.702 127.867 94.505 1.00 37.96 N
ATOM 17 C5 A A2006 39.137 127.039 95.462 1.00 39.97 C
ATOM 18 C6 A A2006 39.653 126.459 96.630 1.00 39.24 C
ATOM 19 N6 A A2006 40.892 126.646 97.057 1.00 40.02 N
ATOM 20 N1 A A2006 38.839 125.673 97.354 1.00 40.03 N
ATOM 21 C2 A A2006 37.585 125.493 96.933 1.00 41.95 C
ATOM 22 N3 A A2006 36.978 125.986 95.856 1.00 43.02 N
ATOM 23 C4 A A2006 37.822 126.759 95.152 1.00 40.88 C
ATOM 24 P C A2007 34.401 131.809 93.703 1.00 40.89 P
ATOM 25 OP1 C A2007 33.163 132.485 93.266 1.00 42.65 O
ATOM 26 OP2 C A2007 35.671 132.560 93.740 1.00 42.24 O
ATOM 27 O5' C A2007 34.141 131.188 95.145 1.00 41.49 O
TER
ATOM 1 O3' G B 525 30.319 121.656 95.454 1.00 41.28 O
ATOM 2 P C B 526 28.749 122.006 95.418 1.00 36.26 P
ATOM 3 OP1 C B 526 28.053 121.089 96.328 1.00 38.29 O
ATOM 4 OP2 C B 526 28.367 122.055 94.004 1.00 36.57 O
ATOM 5 O5' C B 526 28.660 123.489 95.990 1.00 37.53 O
ATOM 6 C5' C B 526 27.457 123.978 96.620 1.00 40.04 C
ATOM 7 C4' C B 526 27.125 125.371 96.119 1.00 42.09 C
ATOM 8 O4' C B 526 28.126 126.347 96.510 1.00 42.61 O
ATOM 9 C3' C B 526 27.013 125.526 94.618 1.00 42.72 C
ATOM 10 O3' C B 526 26.160 126.632 94.346 1.00 45.55 O
ATOM 11 C2' C B 526 28.454 125.821 94.224 1.00 41.76 C
ATOM 12 O2' C B 526 28.537 126.497 92.991 1.00 40.89 O
ATOM 13 C1' C B 526 28.942 126.685 95.397 1.00 41.94 C
ATOM 14 N1 C B 526 30.349 126.412 95.782 1.00 43.03 N
ATOM 15 C2 C B 526 31.388 126.638 94.853 1.00 41.07 C
ATOM 16 O2 C B 526 31.125 127.120 93.752 1.00 42.27 O
ATOM 17 N3 C B 526 32.652 126.325 95.190 1.00 41.17 N
ATOM 18 C4 C B 526 32.918 125.826 96.395 1.00 42.66 C
ATOM 19 N4 C B 526 34.190 125.514 96.672 1.00 41.69 N
ATOM 20 C5 C B 526 31.895 125.619 97.371 1.00 42.75 C
ATOM 21 C6 C B 526 30.641 125.920 97.026 1.00 41.69 C
ATOM 22 P G B 527 24.610 126.384 94.006 1.00 46.28 P
ATOM 23 OP1 G B 527 24.088 127.617 93.363 1.00 48.03 O
ATOM 24 OP2 G B 527 23.933 125.844 95.208 1.00 46.23 O
ATOM 25 O5' G B 527 24.652 125.239 92.910 1.00 44.44 O
TER
ATOM 2 P A A2006 39.168 130.863 90.288 1.00 41.21 P
ATOM 3 OP1 A A2006 38.638 132.016 89.522 1.00 39.99 O
ATOM 4 OP2 A A2006 40.321 131.070 91.199 1.00 41.73 O
ATOM 5 O5' A A2006 37.998 130.207 91.149 1.00 38.29 O
ATOM 6 C5' A A2006 36.798 129.742 90.527 1.00 36.03 C
ATOM 7 C4' A A2006 35.951 128.989 91.520 1.00 38.79 C
ATOM 8 O4' A A2006 36.597 127.742 91.884 1.00 39.81 O
ATOM 9 C3' A A2006 35.674 129.682 92.846 1.00 37.95 C
ATOM 10 O3' A A2006 34.556 130.546 92.727 1.00 39.39 O
ATOM 11 C2' A A2006 35.325 128.507 93.742 1.00 38.94 C
ATOM 12 O2' A A2006 34.000 128.088 93.495 1.00 39.60 O
ATOM 13 C1' A A2006 36.304 127.439 93.241 1.00 39.42 C
ATOM 14 N9 A A2006 37.566 127.425 93.981 1.00 39.54 N
ATOM 15 C8 A A2006 38.734 128.067 93.654 1.00 38.35 C
ATOM 16 N7 A A2006 39.702 127.867 94.505 1.00 37.96 N
ATOM 17 C5 A A2006 39.137 127.039 95.462 1.00 39.97 C
ATOM 18 C6 A A2006 39.653 126.459 96.630 1.00 39.24 C
ATOM 19 N6 A A2006 40.892 126.646 97.057 1.00 40.02 N
ATOM 20 N1 A A2006 38.839 125.673 97.354 1.00 40.03 N
ATOM 21 C2 A A2006 37.585 125.493 96.933 1.00 41.95 C
ATOM 22 N3 A A2006 36.978 125.986 95.856 1.00 43.02 N
ATOM 23 C4 A A2006 37.822 126.759 95.152 1.00 40.88 C
ATOM 24 P C A2007 34.401 131.809 93.703 1.00 40.89 P
ATOM 25 OP1 C A2007 33.163 132.485 93.266 1.00 42.65 O
ATOM 26 OP2 C A2007 35.671 132.560 93.740 1.00 42.24 O
ATOM 27 O5' C A2007 34.141 131.188 95.145 1.00 41.49 O
TER
ATOM 1 O3' G B 525 30.319 121.656 95.454 1.00 41.28 O
ATOM 2 P C B 526 28.749 122.006 95.418 1.00 36.26 P
ATOM 3 OP1 C B 526 28.053 121.089 96.328 1.00 38.29 O
ATOM 4 OP2 C B 526 28.367 122.055 94.004 1.00 36.57 O
ATOM 5 O5' C B 526 28.660 123.489 95.990 1.00 37.53 O
ATOM 6 C5' C B 526 27.457 123.978 96.620 1.00 40.04 C
ATOM 7 C4' C B 526 27.125 125.371 96.119 1.00 42.09 C
ATOM 8 O4' C B 526 28.126 126.347 96.510 1.00 42.61 O
ATOM 9 C3' C B 526 27.013 125.526 94.618 1.00 42.72 C
ATOM 10 O3' C B 526 26.160 126.632 94.346 1.00 45.55 O
ATOM 11 C2' C B 526 28.454 125.821 94.224 1.00 41.76 C
ATOM 12 O2' C B 526 28.537 126.497 92.991 1.00 40.89 O
ATOM 13 C1' C B 526 28.942 126.685 95.397 1.00 41.94 C
ATOM 14 N1 C B 526 30.349 126.412 95.782 1.00 43.03 N
ATOM 15 C2 C B 526 31.388 126.638 94.853 1.00 41.07 C
ATOM 16 O2 C B 526 31.125 127.120 93.752 1.00 42.27 O
ATOM 17 N3 C B 526 32.652 126.325 95.190 1.00 41.17 N
ATOM 18 C4 C B 526 32.918 125.826 96.395 1.00 42.66 C
ATOM 19 N4 C B 526 34.190 125.514 96.672 1.00 41.69 N
ATOM 20 C5 C B 526 31.895 125.619 97.371 1.00 42.75 C
ATOM 21 C6 C B 526 30.641 125.920 97.026 1.00 41.69 C
ATOM 22 P G B 527 24.610 126.384 94.006 1.00 46.28 P
ATOM 23 OP1 G B 527 24.088 127.617 93.363 1.00 48.03 O
ATOM 24 OP2 G B 527 23.933 125.844 95.208 1.00 46.23 O
ATOM 25 O5' G B 527 24.652 125.239 92.910 1.00 44.44 O
TER
Atoms:
OP1: (38.638,132.016,89.522)
OP2: (40.321,131.070,91.199)
C3': (35.674,129.682,92.846)
C1': (36.304,127.439,93.241)
C5': (36.798,129.742,90.527)
O4': (36.597,127.742,91.884)
C8: (38.734,128.067,93.654)
O2': (34.000,128.088,93.495)
C6: (39.653,126.459,96.630)
C5: (39.137,127.039,95.462)
C4: (37.822,126.759,95.152)
P: (39.168,130.863,90.288)
C4': (35.951,128.989,91.520)
C2': (35.325,128.507,93.742)
C2: (37.585,125.493,96.933)
N1: (38.839,125.673,97.354)
N3: (36.978,125.986,95.856)
N6: (40.892,126.646,97.057)
N7: (39.702,127.867,94.505)
N9: (37.566,127.425,93.981)
O5': (37.998,130.207,91.149)
O3': (34.556,130.546,92.727)
OP2: (40.321,131.070,91.199)
C3': (35.674,129.682,92.846)
C1': (36.304,127.439,93.241)
C5': (36.798,129.742,90.527)
O4': (36.597,127.742,91.884)
C8: (38.734,128.067,93.654)
O2': (34.000,128.088,93.495)
C6: (39.653,126.459,96.630)
C5: (39.137,127.039,95.462)
C4: (37.822,126.759,95.152)
P: (39.168,130.863,90.288)
C4': (35.951,128.989,91.520)
C2': (35.325,128.507,93.742)
C2: (37.585,125.493,96.933)
N1: (38.839,125.673,97.354)
N3: (36.978,125.986,95.856)
N6: (40.892,126.646,97.057)
N7: (39.702,127.867,94.505)
N9: (37.566,127.425,93.981)
O5': (37.998,130.207,91.149)
O3': (34.556,130.546,92.727)
C2: (31.388,126.638,94.853)
OP1: (28.053,121.089,96.328)
OP2: (28.367,122.055,94.004)
C4: (32.918,125.826,96.395)
O5': (28.660,123.489,95.990)
C3': (27.013,125.526,94.618)
C1': (28.942,126.685,95.397)
O4': (28.126,126.347,96.510)
C5': (27.457,123.978,96.620)
P: (28.749,122.006,95.418)
O2: (31.125,127.120,93.752)
C4': (27.125,125.371,96.119)
C2': (28.454,125.821,94.224)
O2': (28.537,126.497,92.991)
N1: (30.349,126.412,95.782)
N3: (32.652,126.325,95.190)
N4: (34.190,125.514,96.672)
C6: (30.641,125.920,97.026)
C5: (31.895,125.619,97.371)
O3': (26.160,126.632,94.346)
OP1: (28.053,121.089,96.328)
OP2: (28.367,122.055,94.004)
C4: (32.918,125.826,96.395)
O5': (28.660,123.489,95.990)
C3': (27.013,125.526,94.618)
C1': (28.942,126.685,95.397)
O4': (28.126,126.347,96.510)
C5': (27.457,123.978,96.620)
P: (28.749,122.006,95.418)
O2: (31.125,127.120,93.752)
C4': (27.125,125.371,96.119)
C2': (28.454,125.821,94.224)
O2': (28.537,126.497,92.991)
N1: (30.349,126.412,95.782)
N3: (32.652,126.325,95.190)
N4: (34.190,125.514,96.672)
C6: (30.641,125.920,97.026)
C5: (31.895,125.619,97.371)
O3': (26.160,126.632,94.346)
Image (generated by PyMOL):