Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0407:01878
Extra
PDB:
ATOM 1 O3' C A 406 83.584 85.576 33.712 1.00 55.09 O
ATOM 2 P A A 407 84.163 85.363 32.227 1.00 56.35 P
ATOM 3 OP1 A A 407 84.450 86.708 31.670 1.00 57.31 O
ATOM 4 OP2 A A 407 83.250 84.448 31.496 1.00 57.67 O
ATOM 5 O5' A A 407 85.547 84.618 32.461 1.00 54.70 O
ATOM 6 C5' A A 407 86.656 85.317 33.043 1.00 56.31 C
ATOM 7 C4' A A 407 87.867 84.424 33.094 1.00 57.81 C
ATOM 8 O4' A A 407 87.620 83.330 34.009 1.00 58.19 O
ATOM 9 C3' A A 407 88.228 83.752 31.781 1.00 58.89 C
ATOM 10 O3' A A 407 89.007 84.621 30.971 1.00 62.14 O
ATOM 11 C2' A A 407 88.994 82.528 32.253 1.00 57.66 C
ATOM 12 O2' A A 407 90.306 82.854 32.655 1.00 57.19 O
ATOM 13 C1' A A 407 88.177 82.137 33.487 1.00 57.06 C
ATOM 14 N9 A A 407 87.069 81.234 33.173 1.00 55.88 N
ATOM 15 C8 A A 407 85.758 81.564 32.902 1.00 55.58 C
ATOM 16 N7 A A 407 84.998 80.531 32.632 1.00 54.71 N
ATOM 17 C5 A A 407 85.860 79.448 32.739 1.00 53.75 C
ATOM 18 C6 A A 407 85.668 78.076 32.567 1.00 52.14 C
ATOM 19 N6 A A 407 84.496 77.530 32.241 1.00 51.41 N
ATOM 20 N1 A A 407 86.735 77.268 32.743 1.00 51.86 N
ATOM 21 C2 A A 407 87.914 77.817 33.068 1.00 51.85 C
ATOM 22 N3 A A 407 88.221 79.092 33.261 1.00 52.34 N
ATOM 23 C4 A A 407 87.138 79.866 33.077 1.00 54.39 C
ATOM 24 P U A 408 88.953 84.489 29.371 1.00 62.56 P
ATOM 25 OP1 U A 408 89.807 85.587 28.847 1.00 63.43 O
ATOM 26 OP2 U A 408 87.539 84.382 28.917 1.00 62.03 O
ATOM 27 O5' U A 408 89.701 83.112 29.105 1.00 61.09 O
TER
ATOM 1 O3' A B1877 97.949 76.968 29.876 1.00 79.05 O
ATOM 2 P C B1878 98.464 77.584 31.270 1.00 77.77 P
ATOM 3 OP1 C B1878 99.950 77.640 31.249 1.00 76.68 O
ATOM 4 OP2 C B1878 97.780 76.845 32.356 1.00 77.91 O
ATOM 5 O5' C B1878 97.909 79.076 31.263 1.00 76.33 O
ATOM 6 C5' C B1878 98.555 80.102 30.493 1.00 74.06 C
ATOM 7 C4' C B1878 97.801 81.401 30.624 1.00 73.13 C
ATOM 8 O4' C B1878 96.470 81.246 30.073 1.00 74.73 O
ATOM 9 C3' C B1878 97.556 81.876 32.044 1.00 72.02 C
ATOM 10 O3' C B1878 98.680 82.582 32.534 1.00 70.91 O
ATOM 11 C2' C B1878 96.347 82.787 31.884 1.00 73.04 C
ATOM 12 O2' C B1878 96.680 84.067 31.390 1.00 72.61 O
ATOM 13 C1' C B1878 95.553 82.046 30.808 1.00 75.38 C
ATOM 14 N1 C B1878 94.453 81.193 31.319 1.00 77.61 N
ATOM 15 C2 C B1878 93.287 81.812 31.808 1.00 78.05 C
ATOM 16 O2 C B1878 93.224 83.061 31.831 1.00 78.64 O
ATOM 17 N3 C B1878 92.262 81.036 32.243 1.00 77.86 N
ATOM 18 C4 C B1878 92.368 79.703 32.211 1.00 77.25 C
ATOM 19 N4 C B1878 91.326 78.980 32.637 1.00 76.93 N
ATOM 20 C5 C B1878 93.543 79.052 31.738 1.00 76.87 C
ATOM 21 C6 C B1878 94.551 79.825 31.309 1.00 77.61 C
ATOM 22 P A B1879 98.990 82.589 34.106 1.00 71.36 P
ATOM 23 OP1 A B1879 100.014 83.647 34.351 1.00 71.53 O
ATOM 24 OP2 A B1879 99.276 81.187 34.497 1.00 70.68 O
ATOM 25 O5' A B1879 97.616 83.043 34.780 1.00 69.82 O
TER
ATOM 2 P A A 407 84.163 85.363 32.227 1.00 56.35 P
ATOM 3 OP1 A A 407 84.450 86.708 31.670 1.00 57.31 O
ATOM 4 OP2 A A 407 83.250 84.448 31.496 1.00 57.67 O
ATOM 5 O5' A A 407 85.547 84.618 32.461 1.00 54.70 O
ATOM 6 C5' A A 407 86.656 85.317 33.043 1.00 56.31 C
ATOM 7 C4' A A 407 87.867 84.424 33.094 1.00 57.81 C
ATOM 8 O4' A A 407 87.620 83.330 34.009 1.00 58.19 O
ATOM 9 C3' A A 407 88.228 83.752 31.781 1.00 58.89 C
ATOM 10 O3' A A 407 89.007 84.621 30.971 1.00 62.14 O
ATOM 11 C2' A A 407 88.994 82.528 32.253 1.00 57.66 C
ATOM 12 O2' A A 407 90.306 82.854 32.655 1.00 57.19 O
ATOM 13 C1' A A 407 88.177 82.137 33.487 1.00 57.06 C
ATOM 14 N9 A A 407 87.069 81.234 33.173 1.00 55.88 N
ATOM 15 C8 A A 407 85.758 81.564 32.902 1.00 55.58 C
ATOM 16 N7 A A 407 84.998 80.531 32.632 1.00 54.71 N
ATOM 17 C5 A A 407 85.860 79.448 32.739 1.00 53.75 C
ATOM 18 C6 A A 407 85.668 78.076 32.567 1.00 52.14 C
ATOM 19 N6 A A 407 84.496 77.530 32.241 1.00 51.41 N
ATOM 20 N1 A A 407 86.735 77.268 32.743 1.00 51.86 N
ATOM 21 C2 A A 407 87.914 77.817 33.068 1.00 51.85 C
ATOM 22 N3 A A 407 88.221 79.092 33.261 1.00 52.34 N
ATOM 23 C4 A A 407 87.138 79.866 33.077 1.00 54.39 C
ATOM 24 P U A 408 88.953 84.489 29.371 1.00 62.56 P
ATOM 25 OP1 U A 408 89.807 85.587 28.847 1.00 63.43 O
ATOM 26 OP2 U A 408 87.539 84.382 28.917 1.00 62.03 O
ATOM 27 O5' U A 408 89.701 83.112 29.105 1.00 61.09 O
TER
ATOM 1 O3' A B1877 97.949 76.968 29.876 1.00 79.05 O
ATOM 2 P C B1878 98.464 77.584 31.270 1.00 77.77 P
ATOM 3 OP1 C B1878 99.950 77.640 31.249 1.00 76.68 O
ATOM 4 OP2 C B1878 97.780 76.845 32.356 1.00 77.91 O
ATOM 5 O5' C B1878 97.909 79.076 31.263 1.00 76.33 O
ATOM 6 C5' C B1878 98.555 80.102 30.493 1.00 74.06 C
ATOM 7 C4' C B1878 97.801 81.401 30.624 1.00 73.13 C
ATOM 8 O4' C B1878 96.470 81.246 30.073 1.00 74.73 O
ATOM 9 C3' C B1878 97.556 81.876 32.044 1.00 72.02 C
ATOM 10 O3' C B1878 98.680 82.582 32.534 1.00 70.91 O
ATOM 11 C2' C B1878 96.347 82.787 31.884 1.00 73.04 C
ATOM 12 O2' C B1878 96.680 84.067 31.390 1.00 72.61 O
ATOM 13 C1' C B1878 95.553 82.046 30.808 1.00 75.38 C
ATOM 14 N1 C B1878 94.453 81.193 31.319 1.00 77.61 N
ATOM 15 C2 C B1878 93.287 81.812 31.808 1.00 78.05 C
ATOM 16 O2 C B1878 93.224 83.061 31.831 1.00 78.64 O
ATOM 17 N3 C B1878 92.262 81.036 32.243 1.00 77.86 N
ATOM 18 C4 C B1878 92.368 79.703 32.211 1.00 77.25 C
ATOM 19 N4 C B1878 91.326 78.980 32.637 1.00 76.93 N
ATOM 20 C5 C B1878 93.543 79.052 31.738 1.00 76.87 C
ATOM 21 C6 C B1878 94.551 79.825 31.309 1.00 77.61 C
ATOM 22 P A B1879 98.990 82.589 34.106 1.00 71.36 P
ATOM 23 OP1 A B1879 100.014 83.647 34.351 1.00 71.53 O
ATOM 24 OP2 A B1879 99.276 81.187 34.497 1.00 70.68 O
ATOM 25 O5' A B1879 97.616 83.043 34.780 1.00 69.82 O
TER
Atoms:
OP1: (84.450,86.708,31.670)
OP2: (83.250,84.448,31.496)
C3': (88.228,83.752,31.781)
C1': (88.177,82.137,33.487)
C5': (86.656,85.317,33.043)
O4': (87.620,83.330,34.009)
C8: (85.758,81.564,32.902)
O2': (90.306,82.854,32.655)
C6: (85.668,78.076,32.567)
C5: (85.860,79.448,32.739)
C4: (87.138,79.866,33.077)
P: (84.163,85.363,32.227)
C4': (87.867,84.424,33.094)
C2': (88.994,82.528,32.253)
C2: (87.914,77.817,33.068)
N1: (86.735,77.268,32.743)
N3: (88.221,79.092,33.261)
N6: (84.496,77.530,32.241)
N7: (84.998,80.531,32.632)
N9: (87.069,81.234,33.173)
O5': (85.547,84.618,32.461)
O3': (89.007,84.621,30.971)
OP2: (83.250,84.448,31.496)
C3': (88.228,83.752,31.781)
C1': (88.177,82.137,33.487)
C5': (86.656,85.317,33.043)
O4': (87.620,83.330,34.009)
C8: (85.758,81.564,32.902)
O2': (90.306,82.854,32.655)
C6: (85.668,78.076,32.567)
C5: (85.860,79.448,32.739)
C4: (87.138,79.866,33.077)
P: (84.163,85.363,32.227)
C4': (87.867,84.424,33.094)
C2': (88.994,82.528,32.253)
C2: (87.914,77.817,33.068)
N1: (86.735,77.268,32.743)
N3: (88.221,79.092,33.261)
N6: (84.496,77.530,32.241)
N7: (84.998,80.531,32.632)
N9: (87.069,81.234,33.173)
O5': (85.547,84.618,32.461)
O3': (89.007,84.621,30.971)
C2: (93.287,81.812,31.808)
OP1: (99.950,77.640,31.249)
OP2: (97.780,76.845,32.356)
C4: (92.368,79.703,32.211)
O5': (97.909,79.076,31.263)
C3': (97.556,81.876,32.044)
C1': (95.553,82.046,30.808)
O4': (96.470,81.246,30.073)
C5': (98.555,80.102,30.493)
P: (98.464,77.584,31.270)
O2: (93.224,83.061,31.831)
C4': (97.801,81.401,30.624)
C2': (96.347,82.787,31.884)
O2': (96.680,84.067,31.390)
N1: (94.453,81.193,31.319)
N3: (92.262,81.036,32.243)
N4: (91.326,78.980,32.637)
C6: (94.551,79.825,31.309)
C5: (93.543,79.052,31.738)
O3': (98.680,82.582,32.534)
OP1: (99.950,77.640,31.249)
OP2: (97.780,76.845,32.356)
C4: (92.368,79.703,32.211)
O5': (97.909,79.076,31.263)
C3': (97.556,81.876,32.044)
C1': (95.553,82.046,30.808)
O4': (96.470,81.246,30.073)
C5': (98.555,80.102,30.493)
P: (98.464,77.584,31.270)
O2: (93.224,83.061,31.831)
C4': (97.801,81.401,30.624)
C2': (96.347,82.787,31.884)
O2': (96.680,84.067,31.390)
N1: (94.453,81.193,31.319)
N3: (92.262,81.036,32.243)
N4: (91.326,78.980,32.637)
C6: (94.551,79.825,31.309)
C5: (93.543,79.052,31.738)
O3': (98.680,82.582,32.534)
Image (generated by PyMOL):