Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02006:0526
Extra
PDB:
ATOM 1 O3' U A2005 39.343 129.378 88.984 1.00 36.84 O
ATOM 2 P A A2006 38.995 130.538 90.044 1.00 41.00 P
ATOM 3 OP1 A A2006 38.510 131.719 89.275 1.00 40.56 O
ATOM 4 OP2 A A2006 40.143 130.693 90.974 1.00 41.34 O
ATOM 5 O5' A A2006 37.782 129.944 90.890 1.00 38.41 O
ATOM 6 C5' A A2006 36.550 129.577 90.253 1.00 36.77 C
ATOM 7 C4' A A2006 35.702 128.752 91.188 1.00 35.56 C
ATOM 8 O4' A A2006 36.391 127.514 91.500 1.00 34.67 O
ATOM 9 C3' A A2006 35.399 129.368 92.544 1.00 34.21 C
ATOM 10 O3' A A2006 34.288 130.252 92.472 1.00 32.77 O
ATOM 11 C2' A A2006 35.082 128.138 93.382 1.00 34.84 C
ATOM 12 O2' A A2006 33.776 127.656 93.118 1.00 35.98 O
ATOM 13 C1' A A2006 36.102 127.135 92.835 1.00 33.73 C
ATOM 14 N9 A A2006 37.363 127.089 93.575 1.00 32.30 N
ATOM 15 C8 A A2006 38.579 127.608 93.202 1.00 32.38 C
ATOM 16 N7 A A2006 39.543 127.364 94.054 1.00 31.23 N
ATOM 17 C5 A A2006 38.918 126.643 95.063 1.00 30.76 C
ATOM 18 C6 A A2006 39.396 126.069 96.252 1.00 28.52 C
ATOM 19 N6 A A2006 40.665 126.116 96.642 1.00 27.95 N
ATOM 20 N1 A A2006 38.515 125.427 97.034 1.00 28.96 N
ATOM 21 C2 A A2006 37.240 125.360 96.641 1.00 30.56 C
ATOM 22 N3 A A2006 36.669 125.846 95.548 1.00 30.92 N
ATOM 23 C4 A A2006 37.573 126.483 94.788 1.00 31.52 C
ATOM 24 P C A2007 34.244 131.555 93.406 1.00 34.42 P
ATOM 25 OP1 C A2007 33.069 132.339 92.986 1.00 34.80 O
ATOM 26 OP2 C A2007 35.578 132.190 93.424 1.00 34.34 O
ATOM 27 O5' C A2007 33.956 130.990 94.860 1.00 32.84 O
TER
ATOM 1 O3' G B 525 30.118 121.457 95.109 1.00 37.38 O
ATOM 2 P C B 526 28.553 121.825 95.114 1.00 37.49 P
ATOM 3 OP1 C B 526 27.840 120.865 95.978 1.00 37.42 O
ATOM 4 OP2 C B 526 28.148 121.969 93.696 1.00 38.16 O
ATOM 5 O5' C B 526 28.491 123.273 95.771 1.00 36.16 O
ATOM 6 C5' C B 526 27.262 123.785 96.321 1.00 37.43 C
ATOM 7 C4' C B 526 26.943 125.157 95.751 1.00 38.39 C
ATOM 8 O4' C B 526 27.937 126.139 96.130 1.00 38.54 O
ATOM 9 C3' C B 526 26.854 125.267 94.243 1.00 39.12 C
ATOM 10 O3' C B 526 26.001 126.369 93.919 1.00 42.39 O
ATOM 11 C2' C B 526 28.306 125.543 93.865 1.00 38.29 C
ATOM 12 O2' C B 526 28.431 126.209 92.629 1.00 37.95 O
ATOM 13 C1' C B 526 28.781 126.426 95.025 1.00 39.18 C
ATOM 14 N1 C B 526 30.179 126.158 95.447 1.00 40.85 N
ATOM 15 C2 C B 526 31.241 126.382 94.550 1.00 39.59 C
ATOM 16 O2 C B 526 31.007 126.842 93.430 1.00 39.24 O
ATOM 17 N3 C B 526 32.498 126.092 94.939 1.00 39.86 N
ATOM 18 C4 C B 526 32.726 125.614 96.162 1.00 40.20 C
ATOM 19 N4 C B 526 33.982 125.323 96.496 1.00 40.88 N
ATOM 20 C5 C B 526 31.678 125.405 97.097 1.00 40.53 C
ATOM 21 C6 C B 526 30.436 125.682 96.704 1.00 40.82 C
ATOM 22 P G B 527 24.436 126.121 93.626 1.00 42.03 P
ATOM 23 OP1 G B 527 23.847 127.381 93.101 1.00 41.79 O
ATOM 24 OP2 G B 527 23.831 125.465 94.808 1.00 40.16 O
ATOM 25 O5' G B 527 24.436 125.055 92.456 1.00 41.12 O
TER
ATOM 2 P A A2006 38.995 130.538 90.044 1.00 41.00 P
ATOM 3 OP1 A A2006 38.510 131.719 89.275 1.00 40.56 O
ATOM 4 OP2 A A2006 40.143 130.693 90.974 1.00 41.34 O
ATOM 5 O5' A A2006 37.782 129.944 90.890 1.00 38.41 O
ATOM 6 C5' A A2006 36.550 129.577 90.253 1.00 36.77 C
ATOM 7 C4' A A2006 35.702 128.752 91.188 1.00 35.56 C
ATOM 8 O4' A A2006 36.391 127.514 91.500 1.00 34.67 O
ATOM 9 C3' A A2006 35.399 129.368 92.544 1.00 34.21 C
ATOM 10 O3' A A2006 34.288 130.252 92.472 1.00 32.77 O
ATOM 11 C2' A A2006 35.082 128.138 93.382 1.00 34.84 C
ATOM 12 O2' A A2006 33.776 127.656 93.118 1.00 35.98 O
ATOM 13 C1' A A2006 36.102 127.135 92.835 1.00 33.73 C
ATOM 14 N9 A A2006 37.363 127.089 93.575 1.00 32.30 N
ATOM 15 C8 A A2006 38.579 127.608 93.202 1.00 32.38 C
ATOM 16 N7 A A2006 39.543 127.364 94.054 1.00 31.23 N
ATOM 17 C5 A A2006 38.918 126.643 95.063 1.00 30.76 C
ATOM 18 C6 A A2006 39.396 126.069 96.252 1.00 28.52 C
ATOM 19 N6 A A2006 40.665 126.116 96.642 1.00 27.95 N
ATOM 20 N1 A A2006 38.515 125.427 97.034 1.00 28.96 N
ATOM 21 C2 A A2006 37.240 125.360 96.641 1.00 30.56 C
ATOM 22 N3 A A2006 36.669 125.846 95.548 1.00 30.92 N
ATOM 23 C4 A A2006 37.573 126.483 94.788 1.00 31.52 C
ATOM 24 P C A2007 34.244 131.555 93.406 1.00 34.42 P
ATOM 25 OP1 C A2007 33.069 132.339 92.986 1.00 34.80 O
ATOM 26 OP2 C A2007 35.578 132.190 93.424 1.00 34.34 O
ATOM 27 O5' C A2007 33.956 130.990 94.860 1.00 32.84 O
TER
ATOM 1 O3' G B 525 30.118 121.457 95.109 1.00 37.38 O
ATOM 2 P C B 526 28.553 121.825 95.114 1.00 37.49 P
ATOM 3 OP1 C B 526 27.840 120.865 95.978 1.00 37.42 O
ATOM 4 OP2 C B 526 28.148 121.969 93.696 1.00 38.16 O
ATOM 5 O5' C B 526 28.491 123.273 95.771 1.00 36.16 O
ATOM 6 C5' C B 526 27.262 123.785 96.321 1.00 37.43 C
ATOM 7 C4' C B 526 26.943 125.157 95.751 1.00 38.39 C
ATOM 8 O4' C B 526 27.937 126.139 96.130 1.00 38.54 O
ATOM 9 C3' C B 526 26.854 125.267 94.243 1.00 39.12 C
ATOM 10 O3' C B 526 26.001 126.369 93.919 1.00 42.39 O
ATOM 11 C2' C B 526 28.306 125.543 93.865 1.00 38.29 C
ATOM 12 O2' C B 526 28.431 126.209 92.629 1.00 37.95 O
ATOM 13 C1' C B 526 28.781 126.426 95.025 1.00 39.18 C
ATOM 14 N1 C B 526 30.179 126.158 95.447 1.00 40.85 N
ATOM 15 C2 C B 526 31.241 126.382 94.550 1.00 39.59 C
ATOM 16 O2 C B 526 31.007 126.842 93.430 1.00 39.24 O
ATOM 17 N3 C B 526 32.498 126.092 94.939 1.00 39.86 N
ATOM 18 C4 C B 526 32.726 125.614 96.162 1.00 40.20 C
ATOM 19 N4 C B 526 33.982 125.323 96.496 1.00 40.88 N
ATOM 20 C5 C B 526 31.678 125.405 97.097 1.00 40.53 C
ATOM 21 C6 C B 526 30.436 125.682 96.704 1.00 40.82 C
ATOM 22 P G B 527 24.436 126.121 93.626 1.00 42.03 P
ATOM 23 OP1 G B 527 23.847 127.381 93.101 1.00 41.79 O
ATOM 24 OP2 G B 527 23.831 125.465 94.808 1.00 40.16 O
ATOM 25 O5' G B 527 24.436 125.055 92.456 1.00 41.12 O
TER
Atoms:
OP1: (38.510,131.719,89.275)
OP2: (40.143,130.693,90.974)
C3': (35.399,129.368,92.544)
C1': (36.102,127.135,92.835)
C5': (36.550,129.577,90.253)
O4': (36.391,127.514,91.500)
C8: (38.579,127.608,93.202)
O2': (33.776,127.656,93.118)
C6: (39.396,126.069,96.252)
C5: (38.918,126.643,95.063)
C4: (37.573,126.483,94.788)
P: (38.995,130.538,90.044)
C4': (35.702,128.752,91.188)
C2': (35.082,128.138,93.382)
C2: (37.240,125.360,96.641)
N1: (38.515,125.427,97.034)
N3: (36.669,125.846,95.548)
N6: (40.665,126.116,96.642)
N7: (39.543,127.364,94.054)
N9: (37.363,127.089,93.575)
O5': (37.782,129.944,90.890)
O3': (34.288,130.252,92.472)
OP2: (40.143,130.693,90.974)
C3': (35.399,129.368,92.544)
C1': (36.102,127.135,92.835)
C5': (36.550,129.577,90.253)
O4': (36.391,127.514,91.500)
C8: (38.579,127.608,93.202)
O2': (33.776,127.656,93.118)
C6: (39.396,126.069,96.252)
C5: (38.918,126.643,95.063)
C4: (37.573,126.483,94.788)
P: (38.995,130.538,90.044)
C4': (35.702,128.752,91.188)
C2': (35.082,128.138,93.382)
C2: (37.240,125.360,96.641)
N1: (38.515,125.427,97.034)
N3: (36.669,125.846,95.548)
N6: (40.665,126.116,96.642)
N7: (39.543,127.364,94.054)
N9: (37.363,127.089,93.575)
O5': (37.782,129.944,90.890)
O3': (34.288,130.252,92.472)
C2: (31.241,126.382,94.550)
OP1: (27.840,120.865,95.978)
OP2: (28.148,121.969,93.696)
C4: (32.726,125.614,96.162)
O5': (28.491,123.273,95.771)
C3': (26.854,125.267,94.243)
C1': (28.781,126.426,95.025)
O4': (27.937,126.139,96.130)
C5': (27.262,123.785,96.321)
P: (28.553,121.825,95.114)
O2: (31.007,126.842,93.430)
C4': (26.943,125.157,95.751)
C2': (28.306,125.543,93.865)
O2': (28.431,126.209,92.629)
N1: (30.179,126.158,95.447)
N3: (32.498,126.092,94.939)
N4: (33.982,125.323,96.496)
C6: (30.436,125.682,96.704)
C5: (31.678,125.405,97.097)
O3': (26.001,126.369,93.919)
OP1: (27.840,120.865,95.978)
OP2: (28.148,121.969,93.696)
C4: (32.726,125.614,96.162)
O5': (28.491,123.273,95.771)
C3': (26.854,125.267,94.243)
C1': (28.781,126.426,95.025)
O4': (27.937,126.139,96.130)
C5': (27.262,123.785,96.321)
P: (28.553,121.825,95.114)
O2: (31.007,126.842,93.430)
C4': (26.943,125.157,95.751)
C2': (28.306,125.543,93.865)
O2': (28.431,126.209,92.629)
N1: (30.179,126.158,95.447)
N3: (32.498,126.092,94.939)
N4: (33.982,125.323,96.496)
C6: (30.436,125.682,96.704)
C5: (31.678,125.405,97.097)
O3': (26.001,126.369,93.919)
Image (generated by PyMOL):