Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:946:935
Extra
PDB:
ATOM 1 O3' C A 45 75.934 23.342 89.860 1.00 67.88 O
ATOM 2 P A A 46 74.936 22.115 89.592 1.00 69.82 P
ATOM 3 OP1 A A 46 73.813 22.572 88.727 1.00 69.02 O
ATOM 4 OP2 A A 46 74.643 21.508 90.917 1.00 69.50 O
ATOM 5 O5' A A 46 75.822 21.092 88.752 1.00 69.12 O
ATOM 6 C5' A A 46 76.099 21.332 87.364 1.00 68.37 C
ATOM 7 C4' A A 46 76.841 20.164 86.765 1.00 68.38 C
ATOM 8 O4' A A 46 78.132 20.026 87.414 1.00 69.25 O
ATOM 9 C3' A A 46 76.220 18.788 86.933 1.00 68.10 C
ATOM 10 O3' A A 46 75.181 18.551 85.991 1.00 70.63 O
ATOM 11 C2' A A 46 77.417 17.889 86.679 1.00 67.92 C
ATOM 12 O2' A A 46 77.737 17.827 85.308 1.00 66.65 O
ATOM 13 C1' A A 46 78.524 18.662 87.394 1.00 68.71 C
ATOM 14 N9 A A 46 78.715 18.203 88.770 1.00 69.65 N
ATOM 15 C8 A A 46 78.222 18.753 89.929 1.00 69.93 C
ATOM 16 N7 A A 46 78.552 18.090 91.012 1.00 70.26 N
ATOM 17 C5 A A 46 79.318 17.033 90.538 1.00 69.55 C
ATOM 18 C6 A A 46 79.960 15.963 91.188 1.00 68.68 C
ATOM 19 N6 A A 46 79.936 15.776 92.508 1.00 67.84 N
ATOM 20 N1 A A 46 80.637 15.079 90.424 1.00 69.18 N
ATOM 21 C2 A A 46 80.665 15.268 89.097 1.00 69.93 C
ATOM 22 N3 A A 46 80.103 16.232 88.369 1.00 70.04 N
ATOM 23 C4 A A 46 79.433 17.093 89.159 1.00 70.13 C
ATOM 24 P C A 47 74.064 17.426 86.291 1.00 72.10 P
ATOM 25 OP1 C A 47 73.015 17.520 85.240 1.00 70.64 O
ATOM 26 OP2 C A 47 73.680 17.535 87.726 1.00 71.74 O
ATOM 27 O5' C A 47 74.842 16.044 86.104 1.00 72.76 O
TER
ATOM 1 O3' C B 34 83.508 12.204 79.267 1.00 78.99 O
ATOM 2 P C B 35 84.191 13.657 79.148 1.00 78.34 P
ATOM 3 OP1 C B 35 84.725 13.763 77.764 1.00 77.89 O
ATOM 4 OP2 C B 35 85.101 13.904 80.304 1.00 75.36 O
ATOM 5 O5' C B 35 82.948 14.642 79.294 1.00 79.25 O
ATOM 6 C5' C B 35 81.917 14.689 78.286 1.00 78.63 C
ATOM 7 C4' C B 35 80.803 15.612 78.720 1.00 78.27 C
ATOM 8 O4' C B 35 79.999 14.976 79.750 1.00 79.48 O
ATOM 9 C3' C B 35 81.236 16.917 79.366 1.00 77.19 C
ATOM 10 O3' C B 35 81.658 17.884 78.415 1.00 74.41 O
ATOM 11 C2' C B 35 79.976 17.328 80.117 1.00 78.33 C
ATOM 12 O2' C B 35 78.986 17.889 79.271 1.00 78.14 O
ATOM 13 C1' C B 35 79.485 15.971 80.628 1.00 78.96 C
ATOM 14 N1 C B 35 79.909 15.670 82.013 1.00 79.09 N
ATOM 15 C2 C B 35 79.167 16.212 83.071 1.00 79.65 C
ATOM 16 O2 C B 35 78.174 16.907 82.814 1.00 82.15 O
ATOM 17 N3 C B 35 79.544 15.963 84.343 1.00 79.12 N
ATOM 18 C4 C B 35 80.608 15.204 84.586 1.00 78.87 C
ATOM 19 N4 C B 35 80.943 14.994 85.863 1.00 77.66 N
ATOM 20 C5 C B 35 81.379 14.627 83.531 1.00 79.08 C
ATOM 21 C6 C B 35 81.000 14.886 82.272 1.00 78.86 C
ATOM 22 P C B 36 82.900 18.844 78.762 1.00 72.69 P
ATOM 23 OP1 C B 36 82.944 19.887 77.707 1.00 73.00 O
ATOM 24 OP2 C B 36 84.098 18.007 79.013 1.00 72.83 O
ATOM 25 O5' C B 36 82.500 19.523 80.150 1.00 71.94 O
TER
ATOM 2 P A A 46 74.936 22.115 89.592 1.00 69.82 P
ATOM 3 OP1 A A 46 73.813 22.572 88.727 1.00 69.02 O
ATOM 4 OP2 A A 46 74.643 21.508 90.917 1.00 69.50 O
ATOM 5 O5' A A 46 75.822 21.092 88.752 1.00 69.12 O
ATOM 6 C5' A A 46 76.099 21.332 87.364 1.00 68.37 C
ATOM 7 C4' A A 46 76.841 20.164 86.765 1.00 68.38 C
ATOM 8 O4' A A 46 78.132 20.026 87.414 1.00 69.25 O
ATOM 9 C3' A A 46 76.220 18.788 86.933 1.00 68.10 C
ATOM 10 O3' A A 46 75.181 18.551 85.991 1.00 70.63 O
ATOM 11 C2' A A 46 77.417 17.889 86.679 1.00 67.92 C
ATOM 12 O2' A A 46 77.737 17.827 85.308 1.00 66.65 O
ATOM 13 C1' A A 46 78.524 18.662 87.394 1.00 68.71 C
ATOM 14 N9 A A 46 78.715 18.203 88.770 1.00 69.65 N
ATOM 15 C8 A A 46 78.222 18.753 89.929 1.00 69.93 C
ATOM 16 N7 A A 46 78.552 18.090 91.012 1.00 70.26 N
ATOM 17 C5 A A 46 79.318 17.033 90.538 1.00 69.55 C
ATOM 18 C6 A A 46 79.960 15.963 91.188 1.00 68.68 C
ATOM 19 N6 A A 46 79.936 15.776 92.508 1.00 67.84 N
ATOM 20 N1 A A 46 80.637 15.079 90.424 1.00 69.18 N
ATOM 21 C2 A A 46 80.665 15.268 89.097 1.00 69.93 C
ATOM 22 N3 A A 46 80.103 16.232 88.369 1.00 70.04 N
ATOM 23 C4 A A 46 79.433 17.093 89.159 1.00 70.13 C
ATOM 24 P C A 47 74.064 17.426 86.291 1.00 72.10 P
ATOM 25 OP1 C A 47 73.015 17.520 85.240 1.00 70.64 O
ATOM 26 OP2 C A 47 73.680 17.535 87.726 1.00 71.74 O
ATOM 27 O5' C A 47 74.842 16.044 86.104 1.00 72.76 O
TER
ATOM 1 O3' C B 34 83.508 12.204 79.267 1.00 78.99 O
ATOM 2 P C B 35 84.191 13.657 79.148 1.00 78.34 P
ATOM 3 OP1 C B 35 84.725 13.763 77.764 1.00 77.89 O
ATOM 4 OP2 C B 35 85.101 13.904 80.304 1.00 75.36 O
ATOM 5 O5' C B 35 82.948 14.642 79.294 1.00 79.25 O
ATOM 6 C5' C B 35 81.917 14.689 78.286 1.00 78.63 C
ATOM 7 C4' C B 35 80.803 15.612 78.720 1.00 78.27 C
ATOM 8 O4' C B 35 79.999 14.976 79.750 1.00 79.48 O
ATOM 9 C3' C B 35 81.236 16.917 79.366 1.00 77.19 C
ATOM 10 O3' C B 35 81.658 17.884 78.415 1.00 74.41 O
ATOM 11 C2' C B 35 79.976 17.328 80.117 1.00 78.33 C
ATOM 12 O2' C B 35 78.986 17.889 79.271 1.00 78.14 O
ATOM 13 C1' C B 35 79.485 15.971 80.628 1.00 78.96 C
ATOM 14 N1 C B 35 79.909 15.670 82.013 1.00 79.09 N
ATOM 15 C2 C B 35 79.167 16.212 83.071 1.00 79.65 C
ATOM 16 O2 C B 35 78.174 16.907 82.814 1.00 82.15 O
ATOM 17 N3 C B 35 79.544 15.963 84.343 1.00 79.12 N
ATOM 18 C4 C B 35 80.608 15.204 84.586 1.00 78.87 C
ATOM 19 N4 C B 35 80.943 14.994 85.863 1.00 77.66 N
ATOM 20 C5 C B 35 81.379 14.627 83.531 1.00 79.08 C
ATOM 21 C6 C B 35 81.000 14.886 82.272 1.00 78.86 C
ATOM 22 P C B 36 82.900 18.844 78.762 1.00 72.69 P
ATOM 23 OP1 C B 36 82.944 19.887 77.707 1.00 73.00 O
ATOM 24 OP2 C B 36 84.098 18.007 79.013 1.00 72.83 O
ATOM 25 O5' C B 36 82.500 19.523 80.150 1.00 71.94 O
TER
Atoms:
OP1: (73.813,22.572,88.727)
OP2: (74.643,21.508,90.917)
C3': (76.220,18.788,86.933)
C1': (78.524,18.662,87.394)
C5': (76.099,21.332,87.364)
O4': (78.132,20.026,87.414)
C8: (78.222,18.753,89.929)
O2': (77.737,17.827,85.308)
C6: (79.960,15.963,91.188)
C5: (79.318,17.033,90.538)
C4: (79.433,17.093,89.159)
P: (74.936,22.115,89.592)
C4': (76.841,20.164,86.765)
C2': (77.417,17.889,86.679)
C2: (80.665,15.268,89.097)
N1: (80.637,15.079,90.424)
N3: (80.103,16.232,88.369)
N6: (79.936,15.776,92.508)
N7: (78.552,18.090,91.012)
N9: (78.715,18.203,88.770)
O5': (75.822,21.092,88.752)
O3': (75.181,18.551,85.991)
OP2: (74.643,21.508,90.917)
C3': (76.220,18.788,86.933)
C1': (78.524,18.662,87.394)
C5': (76.099,21.332,87.364)
O4': (78.132,20.026,87.414)
C8: (78.222,18.753,89.929)
O2': (77.737,17.827,85.308)
C6: (79.960,15.963,91.188)
C5: (79.318,17.033,90.538)
C4: (79.433,17.093,89.159)
P: (74.936,22.115,89.592)
C4': (76.841,20.164,86.765)
C2': (77.417,17.889,86.679)
C2: (80.665,15.268,89.097)
N1: (80.637,15.079,90.424)
N3: (80.103,16.232,88.369)
N6: (79.936,15.776,92.508)
N7: (78.552,18.090,91.012)
N9: (78.715,18.203,88.770)
O5': (75.822,21.092,88.752)
O3': (75.181,18.551,85.991)
C2: (79.167,16.212,83.071)
OP1: (84.725,13.763,77.764)
OP2: (85.101,13.904,80.304)
C4: (80.608,15.204,84.586)
O5': (82.948,14.642,79.294)
C3': (81.236,16.917,79.366)
C1': (79.485,15.971,80.628)
O4': (79.999,14.976,79.750)
C5': (81.917,14.689,78.286)
P: (84.191,13.657,79.148)
O2: (78.174,16.907,82.814)
C4': (80.803,15.612,78.720)
C2': (79.976,17.328,80.117)
O2': (78.986,17.889,79.271)
N1: (79.909,15.670,82.013)
N3: (79.544,15.963,84.343)
N4: (80.943,14.994,85.863)
C6: (81.000,14.886,82.272)
C5: (81.379,14.627,83.531)
O3': (81.658,17.884,78.415)
OP1: (84.725,13.763,77.764)
OP2: (85.101,13.904,80.304)
C4: (80.608,15.204,84.586)
O5': (82.948,14.642,79.294)
C3': (81.236,16.917,79.366)
C1': (79.485,15.971,80.628)
O4': (79.999,14.976,79.750)
C5': (81.917,14.689,78.286)
P: (84.191,13.657,79.148)
O2: (78.174,16.907,82.814)
C4': (80.803,15.612,78.720)
C2': (79.976,17.328,80.117)
O2': (78.986,17.889,79.271)
N1: (79.909,15.670,82.013)
N3: (79.544,15.963,84.343)
N4: (80.943,14.994,85.863)
C6: (81.000,14.886,82.272)
C5: (81.379,14.627,83.531)
O3': (81.658,17.884,78.415)
Image (generated by PyMOL):