ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:02006:0526

Extra

PDB:
ATOM 1 O3' U A2005 39.263 129.194 88.978 1.00 32.72 O
ATOM 2 P A A2006 38.809 130.360 89.987 1.00 32.53 P
ATOM 3 OP1 A A2006 38.248 131.461 89.160 1.00 32.02 O
ATOM 4 OP2 A A2006 39.915 130.645 90.933 1.00 32.83 O
ATOM 5 O5' A A2006 37.625 129.697 90.818 1.00 33.00 O
ATOM 6 C5' A A2006 36.404 129.299 90.177 1.00 31.78 C
ATOM 7 C4' A A2006 35.549 128.524 91.142 1.00 30.98 C
ATOM 8 O4' A A2006 36.239 127.301 91.504 1.00 31.18 O
ATOM 9 C3' A A2006 35.286 129.203 92.475 1.00 30.29 C
ATOM 10 O3' A A2006 34.193 130.105 92.398 1.00 29.77 O
ATOM 11 C2' A A2006 34.957 128.018 93.363 1.00 31.47 C
ATOM 12 O2' A A2006 33.643 127.562 93.103 1.00 31.27 O
ATOM 13 C1' A A2006 35.960 126.979 92.856 1.00 31.06 C
ATOM 14 N9 A A2006 37.228 126.952 93.587 1.00 31.09 N
ATOM 15 C8 A A2006 38.417 127.515 93.205 1.00 32.57 C
ATOM 16 N7 A A2006 39.402 127.295 94.040 1.00 33.70 N
ATOM 17 C5 A A2006 38.822 126.540 95.049 1.00 33.57 C
ATOM 18 C6 A A2006 39.342 125.975 96.235 1.00 33.77 C
ATOM 19 N6 A A2006 40.618 126.081 96.620 1.00 32.32 N
ATOM 20 N1 A A2006 38.493 125.286 97.021 1.00 33.79 N
ATOM 21 C2 A A2006 37.215 125.178 96.641 1.00 33.20 C
ATOM 22 N3 A A2006 36.610 125.658 95.559 1.00 32.58 N
ATOM 23 C4 A A2006 37.478 126.335 94.791 1.00 32.46 C
ATOM 24 P C A2007 34.097 131.330 93.431 1.00 30.66 P
ATOM 25 OP1 C A2007 32.877 132.094 93.078 1.00 28.13 O
ATOM 26 OP2 C A2007 35.410 132.014 93.470 1.00 30.42 O
ATOM 27 O5' C A2007 33.859 130.648 94.848 1.00 31.78 O
TER

ATOM 1 O3' G B 525 29.968 121.346 95.230 1.00 33.08 O
ATOM 2 P C B 526 28.400 121.661 95.208 1.00 33.47 P
ATOM 3 OP1 C B 526 27.709 120.701 96.091 1.00 36.09 O
ATOM 4 OP2 C B 526 28.013 121.747 93.785 1.00 36.73 O
ATOM 5 O5' C B 526 28.287 123.119 95.836 1.00 34.21 O
ATOM 6 C5' C B 526 27.034 123.609 96.354 1.00 35.48 C
ATOM 7 C4' C B 526 26.740 124.993 95.812 1.00 37.04 C
ATOM 8 O4' C B 526 27.762 125.939 96.215 1.00 37.34 O
ATOM 9 C3' C B 526 26.659 125.123 94.304 1.00 37.01 C
ATOM 10 O3' C B 526 25.839 126.236 93.991 1.00 40.56 O
ATOM 11 C2' C B 526 28.102 125.418 93.923 1.00 36.36 C
ATOM 12 O2' C B 526 28.186 126.129 92.710 1.00 33.84 O
ATOM 13 C1' C B 526 28.576 126.283 95.098 1.00 38.06 C
ATOM 14 N1 C B 526 29.993 126.041 95.468 1.00 39.27 N
ATOM 15 C2 C B 526 31.003 126.195 94.502 1.00 37.90 C
ATOM 16 O2 C B 526 30.713 126.617 93.380 1.00 37.98 O
ATOM 17 N3 C B 526 32.273 125.882 94.827 1.00 38.21 N
ATOM 18 C4 C B 526 32.564 125.453 96.054 1.00 38.26 C
ATOM 19 N4 C B 526 33.824 125.109 96.312 1.00 38.70 N
ATOM 20 C5 C B 526 31.575 125.345 97.068 1.00 38.93 C
ATOM 21 C6 C B 526 30.317 125.642 96.737 1.00 39.94 C
ATOM 22 P G B 527 24.298 126.010 93.613 1.00 41.55 P
ATOM 23 OP1 G B 527 23.791 127.248 92.965 1.00 43.10 O
ATOM 24 OP2 G B 527 23.616 125.475 94.817 1.00 40.96 O
ATOM 25 O5' G B 527 24.340 124.875 92.507 1.00 40.36 O
TER

Atoms:
OP1: (38.248,131.461,89.160)
OP2: (39.915,130.645,90.933)
C3': (35.286,129.203,92.475)
C1': (35.960,126.979,92.856)
C5': (36.404,129.299,90.177)
O4': (36.239,127.301,91.504)
C8: (38.417,127.515,93.205)
O2': (33.643,127.562,93.103)
C6: (39.342,125.975,96.235)
C5: (38.822,126.540,95.049)
C4: (37.478,126.335,94.791)
P: (38.809,130.360,89.987)
C4': (35.549,128.524,91.142)
C2': (34.957,128.018,93.363)
C2: (37.215,125.178,96.641)
N1: (38.493,125.286,97.021)
N3: (36.610,125.658,95.559)
N6: (40.618,126.081,96.620)
N7: (39.402,127.295,94.040)
N9: (37.228,126.952,93.587)
O5': (37.625,129.697,90.818)
O3': (34.193,130.105,92.398)
C2: (31.003,126.195,94.502)
OP1: (27.709,120.701,96.091)
OP2: (28.013,121.747,93.785)
C4: (32.564,125.453,96.054)
O5': (28.287,123.119,95.836)
C3': (26.659,125.123,94.304)
C1': (28.576,126.283,95.098)
O4': (27.762,125.939,96.215)
C5': (27.034,123.609,96.354)
P: (28.400,121.661,95.208)
O2: (30.713,126.617,93.380)
C4': (26.740,124.993,95.812)
C2': (28.102,125.418,93.923)
O2': (28.186,126.129,92.710)
N1: (29.993,126.041,95.468)
N3: (32.273,125.882,94.827)
N4: (33.824,125.109,96.312)
C6: (30.317,125.642,96.737)
C5: (31.575,125.345,97.068)
O3': (25.839,126.236,93.991)
Image (generated by PyMOL):
PyMOL image
show in jmol