Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A364:A392
Extra
PDB:
ATOM 1 O3' U A 363 -36.352 44.405 107.616 1.00 14.48 O
ATOM 2 P A A 364 -37.102 44.033 108.960 1.00 8.46 P
ATOM 3 OP1 A A 364 -38.360 44.821 109.006 1.00 8.46 O
ATOM 4 OP2 A A 364 -36.113 44.184 110.048 1.00 8.46 O
ATOM 5 O5' A A 364 -37.445 42.513 108.741 1.00 8.46 O
ATOM 6 C5' A A 364 -38.561 42.137 107.957 1.00 8.46 C
ATOM 7 C4' A A 364 -38.430 40.724 107.511 1.00 8.46 C
ATOM 8 O4' A A 364 -37.374 40.653 106.519 1.00 8.46 O
ATOM 9 C3' A A 364 -38.029 39.762 108.614 1.00 8.46 C
ATOM 10 O3' A A 364 -38.611 38.491 108.361 1.00 8.46 O
ATOM 11 C2' A A 364 -36.511 39.690 108.453 1.00 8.46 C
ATOM 12 O2' A A 364 -35.914 38.523 108.964 1.00 8.46 O
ATOM 13 C1' A A 364 -36.365 39.776 106.952 1.00 8.46 C
ATOM 14 N9 A A 364 -35.110 40.326 106.531 1.00 8.98 N
ATOM 15 C8 A A 364 -34.878 41.653 106.431 1.00 8.98 C
ATOM 16 N7 A A 364 -33.665 41.939 106.009 1.00 8.98 N
ATOM 17 C5 A A 364 -33.078 40.697 105.829 1.00 8.98 C
ATOM 18 C6 A A 364 -31.802 40.338 105.399 1.00 8.98 C
ATOM 19 N6 A A 364 -30.862 41.205 105.052 1.00 8.98 N
ATOM 20 N1 A A 364 -31.531 39.035 105.333 1.00 8.98 N
ATOM 21 C2 A A 364 -32.498 38.179 105.675 1.00 8.98 C
ATOM 22 N3 A A 364 -33.748 38.401 106.084 1.00 8.98 N
ATOM 23 C4 A A 364 -33.975 39.699 106.142 1.00 8.98 C
ATOM 24 P U A 365 -39.995 38.100 109.042 1.00 22.47 P
ATOM 25 OP1 U A 365 -40.961 37.835 107.970 1.00 22.47 O
ATOM 26 OP2 U A 365 -40.304 39.150 110.021 1.00 22.47 O
ATOM 27 O5' U A 365 -39.624 36.754 109.781 1.00 22.47 O
TER
ATOM 1 O3' A B 391 -36.315 26.954 102.087 1.00 20.96 O
ATOM 2 P G B 392 -37.379 28.092 101.763 1.00 23.61 P
ATOM 3 OP1 G B 392 -38.653 27.408 101.406 1.00 23.61 O
ATOM 4 OP2 G B 392 -36.752 29.001 100.783 1.00 23.61 O
ATOM 5 O5' G B 392 -37.538 28.838 103.164 1.00 23.61 O
ATOM 6 C5' G B 392 -38.504 28.407 104.114 1.00 23.61 C
ATOM 7 C4' G B 392 -38.887 29.518 105.065 1.00 23.61 C
ATOM 8 O4' G B 392 -37.743 29.911 105.854 1.00 23.61 O
ATOM 9 C3' G B 392 -39.375 30.809 104.429 1.00 23.61 C
ATOM 10 O3' G B 392 -40.747 30.753 104.118 1.00 23.61 O
ATOM 11 C2' G B 392 -39.068 31.842 105.488 1.00 23.61 C
ATOM 12 O2' G B 392 -40.095 31.858 106.456 1.00 23.61 O
ATOM 13 C1' G B 392 -37.802 31.286 106.131 1.00 23.61 C
ATOM 14 N9 G B 392 -36.581 31.915 105.611 1.00 23.38 N
ATOM 15 C8 G B 392 -35.646 31.313 104.816 1.00 23.38 C
ATOM 16 N7 G B 392 -34.644 32.088 104.526 1.00 23.38 N
ATOM 17 C5 G B 392 -34.930 33.279 105.179 1.00 23.38 C
ATOM 18 C6 G B 392 -34.194 34.502 105.231 1.00 23.38 C
ATOM 19 O6 G B 392 -33.111 34.794 104.690 1.00 23.38 O
ATOM 20 N1 G B 392 -34.860 35.430 106.029 1.00 23.38 N
ATOM 21 C2 G B 392 -36.058 35.212 106.670 1.00 23.38 C
ATOM 22 N2 G B 392 -36.526 36.237 107.383 1.00 23.38 N
ATOM 23 N3 G B 392 -36.749 34.087 106.630 1.00 23.38 N
ATOM 24 C4 G B 392 -36.123 33.172 105.871 1.00 23.38 C
ATOM 25 P C B 393 -41.340 31.613 102.904 1.00 21.82 P
ATOM 26 OP1 C B 393 -42.792 31.271 102.810 1.00 21.82 O
ATOM 27 OP2 C B 393 -40.457 31.376 101.729 1.00 21.82 O
ATOM 28 O5' C B 393 -41.172 33.114 103.403 1.00 21.82 O
TER
ATOM 2 P A A 364 -37.102 44.033 108.960 1.00 8.46 P
ATOM 3 OP1 A A 364 -38.360 44.821 109.006 1.00 8.46 O
ATOM 4 OP2 A A 364 -36.113 44.184 110.048 1.00 8.46 O
ATOM 5 O5' A A 364 -37.445 42.513 108.741 1.00 8.46 O
ATOM 6 C5' A A 364 -38.561 42.137 107.957 1.00 8.46 C
ATOM 7 C4' A A 364 -38.430 40.724 107.511 1.00 8.46 C
ATOM 8 O4' A A 364 -37.374 40.653 106.519 1.00 8.46 O
ATOM 9 C3' A A 364 -38.029 39.762 108.614 1.00 8.46 C
ATOM 10 O3' A A 364 -38.611 38.491 108.361 1.00 8.46 O
ATOM 11 C2' A A 364 -36.511 39.690 108.453 1.00 8.46 C
ATOM 12 O2' A A 364 -35.914 38.523 108.964 1.00 8.46 O
ATOM 13 C1' A A 364 -36.365 39.776 106.952 1.00 8.46 C
ATOM 14 N9 A A 364 -35.110 40.326 106.531 1.00 8.98 N
ATOM 15 C8 A A 364 -34.878 41.653 106.431 1.00 8.98 C
ATOM 16 N7 A A 364 -33.665 41.939 106.009 1.00 8.98 N
ATOM 17 C5 A A 364 -33.078 40.697 105.829 1.00 8.98 C
ATOM 18 C6 A A 364 -31.802 40.338 105.399 1.00 8.98 C
ATOM 19 N6 A A 364 -30.862 41.205 105.052 1.00 8.98 N
ATOM 20 N1 A A 364 -31.531 39.035 105.333 1.00 8.98 N
ATOM 21 C2 A A 364 -32.498 38.179 105.675 1.00 8.98 C
ATOM 22 N3 A A 364 -33.748 38.401 106.084 1.00 8.98 N
ATOM 23 C4 A A 364 -33.975 39.699 106.142 1.00 8.98 C
ATOM 24 P U A 365 -39.995 38.100 109.042 1.00 22.47 P
ATOM 25 OP1 U A 365 -40.961 37.835 107.970 1.00 22.47 O
ATOM 26 OP2 U A 365 -40.304 39.150 110.021 1.00 22.47 O
ATOM 27 O5' U A 365 -39.624 36.754 109.781 1.00 22.47 O
TER
ATOM 1 O3' A B 391 -36.315 26.954 102.087 1.00 20.96 O
ATOM 2 P G B 392 -37.379 28.092 101.763 1.00 23.61 P
ATOM 3 OP1 G B 392 -38.653 27.408 101.406 1.00 23.61 O
ATOM 4 OP2 G B 392 -36.752 29.001 100.783 1.00 23.61 O
ATOM 5 O5' G B 392 -37.538 28.838 103.164 1.00 23.61 O
ATOM 6 C5' G B 392 -38.504 28.407 104.114 1.00 23.61 C
ATOM 7 C4' G B 392 -38.887 29.518 105.065 1.00 23.61 C
ATOM 8 O4' G B 392 -37.743 29.911 105.854 1.00 23.61 O
ATOM 9 C3' G B 392 -39.375 30.809 104.429 1.00 23.61 C
ATOM 10 O3' G B 392 -40.747 30.753 104.118 1.00 23.61 O
ATOM 11 C2' G B 392 -39.068 31.842 105.488 1.00 23.61 C
ATOM 12 O2' G B 392 -40.095 31.858 106.456 1.00 23.61 O
ATOM 13 C1' G B 392 -37.802 31.286 106.131 1.00 23.61 C
ATOM 14 N9 G B 392 -36.581 31.915 105.611 1.00 23.38 N
ATOM 15 C8 G B 392 -35.646 31.313 104.816 1.00 23.38 C
ATOM 16 N7 G B 392 -34.644 32.088 104.526 1.00 23.38 N
ATOM 17 C5 G B 392 -34.930 33.279 105.179 1.00 23.38 C
ATOM 18 C6 G B 392 -34.194 34.502 105.231 1.00 23.38 C
ATOM 19 O6 G B 392 -33.111 34.794 104.690 1.00 23.38 O
ATOM 20 N1 G B 392 -34.860 35.430 106.029 1.00 23.38 N
ATOM 21 C2 G B 392 -36.058 35.212 106.670 1.00 23.38 C
ATOM 22 N2 G B 392 -36.526 36.237 107.383 1.00 23.38 N
ATOM 23 N3 G B 392 -36.749 34.087 106.630 1.00 23.38 N
ATOM 24 C4 G B 392 -36.123 33.172 105.871 1.00 23.38 C
ATOM 25 P C B 393 -41.340 31.613 102.904 1.00 21.82 P
ATOM 26 OP1 C B 393 -42.792 31.271 102.810 1.00 21.82 O
ATOM 27 OP2 C B 393 -40.457 31.376 101.729 1.00 21.82 O
ATOM 28 O5' C B 393 -41.172 33.114 103.403 1.00 21.82 O
TER
Atoms:
OP1: (-38.360,44.821,109.006)
OP2: (-36.113,44.184,110.048)
C3': (-38.029,39.762,108.614)
C1': (-36.365,39.776,106.952)
C5': (-38.561,42.137,107.957)
O4': (-37.374,40.653,106.519)
C8: (-34.878,41.653,106.431)
O2': (-35.914,38.523,108.964)
C6: (-31.802,40.338,105.399)
C5: (-33.078,40.697,105.829)
C4: (-33.975,39.699,106.142)
P: (-37.102,44.033,108.960)
C4': (-38.430,40.724,107.511)
C2': (-36.511,39.690,108.453)
C2: (-32.498,38.179,105.675)
N1: (-31.531,39.035,105.333)
N3: (-33.748,38.401,106.084)
N6: (-30.862,41.205,105.052)
N7: (-33.665,41.939,106.009)
N9: (-35.110,40.326,106.531)
O5': (-37.445,42.513,108.741)
O3': (-38.611,38.491,108.361)
OP2: (-36.113,44.184,110.048)
C3': (-38.029,39.762,108.614)
C1': (-36.365,39.776,106.952)
C5': (-38.561,42.137,107.957)
O4': (-37.374,40.653,106.519)
C8: (-34.878,41.653,106.431)
O2': (-35.914,38.523,108.964)
C6: (-31.802,40.338,105.399)
C5: (-33.078,40.697,105.829)
C4: (-33.975,39.699,106.142)
P: (-37.102,44.033,108.960)
C4': (-38.430,40.724,107.511)
C2': (-36.511,39.690,108.453)
C2: (-32.498,38.179,105.675)
N1: (-31.531,39.035,105.333)
N3: (-33.748,38.401,106.084)
N6: (-30.862,41.205,105.052)
N7: (-33.665,41.939,106.009)
N9: (-35.110,40.326,106.531)
O5': (-37.445,42.513,108.741)
O3': (-38.611,38.491,108.361)
OP1: (-38.653,27.408,101.406)
OP2: (-36.752,29.001,100.783)
C3': (-39.375,30.809,104.429)
C1': (-37.802,31.286,106.131)
C5': (-38.504,28.407,104.114)
O6: (-33.111,34.794,104.690)
O4': (-37.743,29.911,105.854)
C8: (-35.646,31.313,104.816)
C2: (-36.058,35.212,106.670)
C6: (-34.194,34.502,105.231)
C5: (-34.930,33.279,105.179)
C4: (-36.123,33.172,105.871)
P: (-37.379,28.092,101.763)
C4': (-38.887,29.518,105.065)
C2': (-39.068,31.842,105.488)
O2': (-40.095,31.858,106.456)
N1: (-34.860,35.430,106.029)
N2: (-36.526,36.237,107.383)
N3: (-36.749,34.087,106.630)
N7: (-34.644,32.088,104.526)
N9: (-36.581,31.915,105.611)
O5': (-37.538,28.838,103.164)
O3': (-40.747,30.753,104.118)
OP2: (-36.752,29.001,100.783)
C3': (-39.375,30.809,104.429)
C1': (-37.802,31.286,106.131)
C5': (-38.504,28.407,104.114)
O6: (-33.111,34.794,104.690)
O4': (-37.743,29.911,105.854)
C8: (-35.646,31.313,104.816)
C2: (-36.058,35.212,106.670)
C6: (-34.194,34.502,105.231)
C5: (-34.930,33.279,105.179)
C4: (-36.123,33.172,105.871)
P: (-37.379,28.092,101.763)
C4': (-38.887,29.518,105.065)
C2': (-39.068,31.842,105.488)
O2': (-40.095,31.858,106.456)
N1: (-34.860,35.430,106.029)
N2: (-36.526,36.237,107.383)
N3: (-36.749,34.087,106.630)
N7: (-34.644,32.088,104.526)
N9: (-36.581,31.915,105.611)
O5': (-37.538,28.838,103.164)
O3': (-40.747,30.753,104.118)
Image (generated by PyMOL):