Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J9H:D7:C3
Extra
PDB:
ATOM 1 P A A 7 41.724 29.476 32.536 1.00 16.98 P
ATOM 2 OP1 A A 7 42.757 30.394 31.928 1.00 21.12 O
ATOM 3 OP2 A A 7 40.762 28.766 31.640 1.00 18.80 O
ATOM 4 O5' A A 7 42.503 28.339 33.345 1.00 14.63 O
ATOM 5 C5' A A 7 43.569 28.660 34.225 1.00 14.99 C
ATOM 6 C4' A A 7 44.139 27.400 34.858 1.00 10.78 C
ATOM 7 O4' A A 7 43.080 26.804 35.666 1.00 12.82 O
ATOM 8 C3' A A 7 44.567 26.259 33.949 1.00 11.87 C
ATOM 9 O3' A A 7 45.848 26.478 33.386 1.00 14.33 O
ATOM 10 C2' A A 7 44.532 25.097 34.935 1.00 11.62 C
ATOM 11 O2' A A 7 45.580 25.124 35.863 1.00 12.38 O
ATOM 12 C1' A A 7 43.234 25.396 35.683 1.00 11.44 C
ATOM 13 N9 A A 7 42.083 24.825 34.990 1.00 11.86 N
ATOM 14 C8 A A 7 41.134 25.476 34.234 1.00 11.41 C
ATOM 15 N7 A A 7 40.191 24.685 33.781 1.00 12.55 N
ATOM 16 C5 A A 7 40.557 23.432 34.253 1.00 9.81 C
ATOM 17 C6 A A 7 39.936 22.160 34.160 1.00 12.03 C
ATOM 18 N6 A A 7 38.753 21.939 33.561 1.00 13.12 N
ATOM 19 N1 A A 7 40.574 21.106 34.736 1.00 13.09 N
ATOM 20 C2 A A 7 41.744 21.331 35.380 1.00 10.81 C
ATOM 21 N3 A A 7 42.398 22.473 35.544 1.00 10.83 N
ATOM 22 C4 A A 7 41.730 23.498 34.968 1.00 10.27 C
ATOM 23 P C A 8 46.123 26.066 31.845 1.00 14.69 P
ATOM 24 OP1 C A 8 47.397 26.727 31.386 1.00 17.60 O
ATOM 25 OP2 C A 8 44.887 26.210 31.048 1.00 14.65 O
ATOM 26 O5' C A 8 46.417 24.504 31.906 1.00 13.42 O
TER
ATOM 1 O3' G B 2 43.874 19.203 42.590 1.00 13.41 O
ATOM 2 P U B 3 45.159 18.901 43.496 1.00 12.31 P
ATOM 3 OP1 U B 3 45.668 17.517 43.210 1.00 14.00 O
ATOM 4 OP2 U B 3 44.818 19.242 44.893 1.00 12.64 O
ATOM 5 O5' U B 3 46.189 19.966 42.912 1.00 11.21 O
ATOM 6 C5' U B 3 46.629 21.086 43.680 1.00 11.58 C
ATOM 7 C4' U B 3 46.110 22.384 43.090 1.00 12.12 C
ATOM 8 O4' U B 3 46.583 22.518 41.738 1.00 12.41 O
ATOM 9 C3' U B 3 44.594 22.515 42.986 1.00 11.11 C
ATOM 10 O3' U B 3 44.201 23.101 44.221 1.00 12.20 O
ATOM 11 C2' U B 3 44.444 23.533 41.854 1.00 9.93 C
ATOM 12 O2' U B 3 44.692 24.858 42.279 1.00 13.52 O
ATOM 13 C1' U B 3 45.578 23.108 40.931 1.00 12.54 C
ATOM 14 N1 U B 3 45.192 22.177 39.850 1.00 11.34 N
ATOM 15 C2 U B 3 44.525 22.736 38.763 1.00 10.90 C
ATOM 16 O2 U B 3 44.188 23.913 38.734 1.00 11.82 O
ATOM 17 N3 U B 3 44.265 21.876 37.729 1.00 12.34 N
ATOM 18 C4 U B 3 44.587 20.528 37.686 1.00 12.75 C
ATOM 19 O4 U B 3 44.254 19.881 36.680 1.00 14.44 O
ATOM 20 C5 U B 3 45.265 20.017 38.864 1.00 10.89 C
ATOM 21 C6 U B 3 45.521 20.847 39.887 1.00 10.18 C
ATOM 22 P C B 4 43.096 22.435 45.172 1.00 11.78 P
ATOM 23 OP1 C B 4 43.788 21.864 46.348 1.00 12.65 O
ATOM 24 OP2 C B 4 42.206 21.601 44.418 1.00 12.14 O
ATOM 25 O5' C B 4 42.302 23.764 45.611 1.00 11.12 O
TER
ATOM 2 OP1 A A 7 42.757 30.394 31.928 1.00 21.12 O
ATOM 3 OP2 A A 7 40.762 28.766 31.640 1.00 18.80 O
ATOM 4 O5' A A 7 42.503 28.339 33.345 1.00 14.63 O
ATOM 5 C5' A A 7 43.569 28.660 34.225 1.00 14.99 C
ATOM 6 C4' A A 7 44.139 27.400 34.858 1.00 10.78 C
ATOM 7 O4' A A 7 43.080 26.804 35.666 1.00 12.82 O
ATOM 8 C3' A A 7 44.567 26.259 33.949 1.00 11.87 C
ATOM 9 O3' A A 7 45.848 26.478 33.386 1.00 14.33 O
ATOM 10 C2' A A 7 44.532 25.097 34.935 1.00 11.62 C
ATOM 11 O2' A A 7 45.580 25.124 35.863 1.00 12.38 O
ATOM 12 C1' A A 7 43.234 25.396 35.683 1.00 11.44 C
ATOM 13 N9 A A 7 42.083 24.825 34.990 1.00 11.86 N
ATOM 14 C8 A A 7 41.134 25.476 34.234 1.00 11.41 C
ATOM 15 N7 A A 7 40.191 24.685 33.781 1.00 12.55 N
ATOM 16 C5 A A 7 40.557 23.432 34.253 1.00 9.81 C
ATOM 17 C6 A A 7 39.936 22.160 34.160 1.00 12.03 C
ATOM 18 N6 A A 7 38.753 21.939 33.561 1.00 13.12 N
ATOM 19 N1 A A 7 40.574 21.106 34.736 1.00 13.09 N
ATOM 20 C2 A A 7 41.744 21.331 35.380 1.00 10.81 C
ATOM 21 N3 A A 7 42.398 22.473 35.544 1.00 10.83 N
ATOM 22 C4 A A 7 41.730 23.498 34.968 1.00 10.27 C
ATOM 23 P C A 8 46.123 26.066 31.845 1.00 14.69 P
ATOM 24 OP1 C A 8 47.397 26.727 31.386 1.00 17.60 O
ATOM 25 OP2 C A 8 44.887 26.210 31.048 1.00 14.65 O
ATOM 26 O5' C A 8 46.417 24.504 31.906 1.00 13.42 O
TER
ATOM 1 O3' G B 2 43.874 19.203 42.590 1.00 13.41 O
ATOM 2 P U B 3 45.159 18.901 43.496 1.00 12.31 P
ATOM 3 OP1 U B 3 45.668 17.517 43.210 1.00 14.00 O
ATOM 4 OP2 U B 3 44.818 19.242 44.893 1.00 12.64 O
ATOM 5 O5' U B 3 46.189 19.966 42.912 1.00 11.21 O
ATOM 6 C5' U B 3 46.629 21.086 43.680 1.00 11.58 C
ATOM 7 C4' U B 3 46.110 22.384 43.090 1.00 12.12 C
ATOM 8 O4' U B 3 46.583 22.518 41.738 1.00 12.41 O
ATOM 9 C3' U B 3 44.594 22.515 42.986 1.00 11.11 C
ATOM 10 O3' U B 3 44.201 23.101 44.221 1.00 12.20 O
ATOM 11 C2' U B 3 44.444 23.533 41.854 1.00 9.93 C
ATOM 12 O2' U B 3 44.692 24.858 42.279 1.00 13.52 O
ATOM 13 C1' U B 3 45.578 23.108 40.931 1.00 12.54 C
ATOM 14 N1 U B 3 45.192 22.177 39.850 1.00 11.34 N
ATOM 15 C2 U B 3 44.525 22.736 38.763 1.00 10.90 C
ATOM 16 O2 U B 3 44.188 23.913 38.734 1.00 11.82 O
ATOM 17 N3 U B 3 44.265 21.876 37.729 1.00 12.34 N
ATOM 18 C4 U B 3 44.587 20.528 37.686 1.00 12.75 C
ATOM 19 O4 U B 3 44.254 19.881 36.680 1.00 14.44 O
ATOM 20 C5 U B 3 45.265 20.017 38.864 1.00 10.89 C
ATOM 21 C6 U B 3 45.521 20.847 39.887 1.00 10.18 C
ATOM 22 P C B 4 43.096 22.435 45.172 1.00 11.78 P
ATOM 23 OP1 C B 4 43.788 21.864 46.348 1.00 12.65 O
ATOM 24 OP2 C B 4 42.206 21.601 44.418 1.00 12.14 O
ATOM 25 O5' C B 4 42.302 23.764 45.611 1.00 11.12 O
TER
Atoms:
OP1: (42.757,30.394,31.928)
OP2: (40.762,28.766,31.640)
C3': (44.567,26.259,33.949)
C1': (43.234,25.396,35.683)
C5': (43.569,28.660,34.225)
O4': (43.080,26.804,35.666)
C8: (41.134,25.476,34.234)
O2': (45.580,25.124,35.863)
C6: (39.936,22.160,34.160)
C5: (40.557,23.432,34.253)
C4: (41.730,23.498,34.968)
P: (41.724,29.476,32.536)
C4': (44.139,27.400,34.858)
C2': (44.532,25.097,34.935)
C2: (41.744,21.331,35.380)
N1: (40.574,21.106,34.736)
N3: (42.398,22.473,35.544)
N6: (38.753,21.939,33.561)
N7: (40.191,24.685,33.781)
N9: (42.083,24.825,34.990)
O5': (42.503,28.339,33.345)
O3': (45.848,26.478,33.386)
OP2: (40.762,28.766,31.640)
C3': (44.567,26.259,33.949)
C1': (43.234,25.396,35.683)
C5': (43.569,28.660,34.225)
O4': (43.080,26.804,35.666)
C8: (41.134,25.476,34.234)
O2': (45.580,25.124,35.863)
C6: (39.936,22.160,34.160)
C5: (40.557,23.432,34.253)
C4: (41.730,23.498,34.968)
P: (41.724,29.476,32.536)
C4': (44.139,27.400,34.858)
C2': (44.532,25.097,34.935)
C2: (41.744,21.331,35.380)
N1: (40.574,21.106,34.736)
N3: (42.398,22.473,35.544)
N6: (38.753,21.939,33.561)
N7: (40.191,24.685,33.781)
N9: (42.083,24.825,34.990)
O5': (42.503,28.339,33.345)
O3': (45.848,26.478,33.386)
C4: (44.587,20.528,37.686)
N3: (44.265,21.876,37.729)
OP1: (45.668,17.517,43.210)
OP2: (44.818,19.242,44.893)
C2: (44.525,22.736,38.763)
C1': (45.578,23.108,40.931)
C3': (44.594,22.515,42.986)
O5': (46.189,19.966,42.912)
O4': (46.583,22.518,41.738)
C5': (46.629,21.086,43.680)
P: (45.159,18.901,43.496)
C4': (46.110,22.384,43.090)
C2': (44.444,23.533,41.854)
O2': (44.692,24.858,42.279)
N1: (45.192,22.177,39.850)
O4: (44.254,19.881,36.680)
O2: (44.188,23.913,38.734)
C6: (45.521,20.847,39.887)
C5: (45.265,20.017,38.864)
O3': (44.201,23.101,44.221)
N3: (44.265,21.876,37.729)
OP1: (45.668,17.517,43.210)
OP2: (44.818,19.242,44.893)
C2: (44.525,22.736,38.763)
C1': (45.578,23.108,40.931)
C3': (44.594,22.515,42.986)
O5': (46.189,19.966,42.912)
O4': (46.583,22.518,41.738)
C5': (46.629,21.086,43.680)
P: (45.159,18.901,43.496)
C4': (46.110,22.384,43.090)
C2': (44.444,23.533,41.854)
O2': (44.692,24.858,42.279)
N1: (45.192,22.177,39.850)
O4: (44.254,19.881,36.680)
O2: (44.188,23.913,38.734)
C6: (45.521,20.847,39.887)
C5: (45.265,20.017,38.864)
O3': (44.201,23.101,44.221)
Image (generated by PyMOL):