Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A2029:A2009
Extra
PDB:
ATOM 1 O3' G A2028 34.291 133.605 120.634 1.00 33.52 O
ATOM 2 P A A2029 33.170 134.709 120.404 1.00 36.39 P
ATOM 3 OP1 A A2029 33.651 135.996 120.965 1.00 35.08 O
ATOM 4 OP2 A A2029 31.924 134.088 120.910 1.00 36.80 O
ATOM 5 O5' A A2029 33.068 134.830 118.823 1.00 34.89 O
ATOM 6 C5' A A2029 34.101 135.452 118.049 1.00 32.88 C
ATOM 7 C4' A A2029 33.702 135.495 116.593 1.00 33.32 C
ATOM 8 O4' A A2029 33.690 134.161 116.043 1.00 34.86 O
ATOM 9 C3' A A2029 32.326 136.051 116.261 1.00 34.22 C
ATOM 10 O3' A A2029 32.318 137.465 116.194 1.00 36.25 O
ATOM 11 C2' A A2029 32.045 135.442 114.900 1.00 34.04 C
ATOM 12 O2' A A2029 32.688 136.126 113.854 1.00 34.48 O
ATOM 13 C1' A A2029 32.688 134.072 115.051 1.00 32.51 C
ATOM 14 N9 A A2029 31.680 133.124 115.497 1.00 30.42 N
ATOM 15 C8 A A2029 31.265 132.841 116.767 1.00 28.45 C
ATOM 16 N7 A A2029 30.322 131.940 116.822 1.00 28.82 N
ATOM 17 C5 A A2029 30.110 131.606 115.495 1.00 28.74 C
ATOM 18 C6 A A2029 29.258 130.705 114.891 1.00 27.99 C
ATOM 19 N6 A A2029 28.430 129.931 115.569 1.00 30.91 N
ATOM 20 N1 A A2029 29.286 130.615 113.548 1.00 28.08 N
ATOM 21 C2 A A2029 30.128 131.394 112.873 1.00 27.83 C
ATOM 22 N3 A A2029 30.990 132.279 113.334 1.00 29.79 N
ATOM 23 C4 A A2029 30.932 132.333 114.672 1.00 29.84 C
ATOM 24 P C A2030 31.142 138.282 116.916 1.00 37.25 P
ATOM 25 OP1 C A2030 31.815 139.382 117.660 1.00 35.61 O
ATOM 26 OP2 C A2030 30.287 137.320 117.636 1.00 35.63 O
ATOM 27 O5' C A2030 30.263 138.857 115.717 1.00 37.10 O
TER
ATOM 1 O3' A B2008 34.341 132.668 104.046 1.00 32.54 O
ATOM 2 P U B2009 34.397 134.175 104.583 1.00 32.08 P
ATOM 3 OP1 U B2009 33.010 134.476 104.995 1.00 31.78 O
ATOM 4 OP2 U B2009 35.071 135.059 103.615 1.00 30.22 O
ATOM 5 O5' U B2009 35.317 134.078 105.874 1.00 32.07 O
ATOM 6 C5' U B2009 36.336 135.053 106.139 1.00 32.69 C
ATOM 7 C4' U B2009 36.688 135.031 107.610 1.00 32.33 C
ATOM 8 O4' U B2009 35.556 135.517 108.381 1.00 33.05 O
ATOM 9 C3' U B2009 36.965 133.657 108.190 1.00 33.53 C
ATOM 10 O3' U B2009 38.268 133.189 107.916 1.00 32.76 O
ATOM 11 C2' U B2009 36.616 133.819 109.667 1.00 33.02 C
ATOM 12 O2' U B2009 37.672 134.377 110.431 1.00 33.95 O
ATOM 13 C1' U B2009 35.441 134.796 109.600 1.00 31.85 C
ATOM 14 N1 U B2009 34.113 134.144 109.644 1.00 30.82 N
ATOM 15 C2 U B2009 33.534 133.868 110.883 1.00 30.61 C
ATOM 16 O2 U B2009 34.044 134.152 111.948 1.00 31.02 O
ATOM 17 N3 U B2009 32.309 133.242 110.823 1.00 30.71 N
ATOM 18 C4 U B2009 31.609 132.869 109.704 1.00 29.97 C
ATOM 19 O4 U B2009 30.622 132.142 109.834 1.00 29.39 O
ATOM 20 C5 U B2009 32.240 133.205 108.479 1.00 30.26 C
ATOM 21 C6 U B2009 33.441 133.807 108.483 1.00 30.41 C
ATOM 22 P U B2010 38.446 131.815 107.110 1.00 34.40 P
ATOM 23 OP1 U B2010 39.107 132.195 105.852 1.00 31.90 O
ATOM 24 OP2 U B2010 37.146 131.112 107.071 1.00 31.20 O
ATOM 25 O5' U B2010 39.424 130.960 108.027 1.00 33.29 O
TER
ATOM 2 P A A2029 33.170 134.709 120.404 1.00 36.39 P
ATOM 3 OP1 A A2029 33.651 135.996 120.965 1.00 35.08 O
ATOM 4 OP2 A A2029 31.924 134.088 120.910 1.00 36.80 O
ATOM 5 O5' A A2029 33.068 134.830 118.823 1.00 34.89 O
ATOM 6 C5' A A2029 34.101 135.452 118.049 1.00 32.88 C
ATOM 7 C4' A A2029 33.702 135.495 116.593 1.00 33.32 C
ATOM 8 O4' A A2029 33.690 134.161 116.043 1.00 34.86 O
ATOM 9 C3' A A2029 32.326 136.051 116.261 1.00 34.22 C
ATOM 10 O3' A A2029 32.318 137.465 116.194 1.00 36.25 O
ATOM 11 C2' A A2029 32.045 135.442 114.900 1.00 34.04 C
ATOM 12 O2' A A2029 32.688 136.126 113.854 1.00 34.48 O
ATOM 13 C1' A A2029 32.688 134.072 115.051 1.00 32.51 C
ATOM 14 N9 A A2029 31.680 133.124 115.497 1.00 30.42 N
ATOM 15 C8 A A2029 31.265 132.841 116.767 1.00 28.45 C
ATOM 16 N7 A A2029 30.322 131.940 116.822 1.00 28.82 N
ATOM 17 C5 A A2029 30.110 131.606 115.495 1.00 28.74 C
ATOM 18 C6 A A2029 29.258 130.705 114.891 1.00 27.99 C
ATOM 19 N6 A A2029 28.430 129.931 115.569 1.00 30.91 N
ATOM 20 N1 A A2029 29.286 130.615 113.548 1.00 28.08 N
ATOM 21 C2 A A2029 30.128 131.394 112.873 1.00 27.83 C
ATOM 22 N3 A A2029 30.990 132.279 113.334 1.00 29.79 N
ATOM 23 C4 A A2029 30.932 132.333 114.672 1.00 29.84 C
ATOM 24 P C A2030 31.142 138.282 116.916 1.00 37.25 P
ATOM 25 OP1 C A2030 31.815 139.382 117.660 1.00 35.61 O
ATOM 26 OP2 C A2030 30.287 137.320 117.636 1.00 35.63 O
ATOM 27 O5' C A2030 30.263 138.857 115.717 1.00 37.10 O
TER
ATOM 1 O3' A B2008 34.341 132.668 104.046 1.00 32.54 O
ATOM 2 P U B2009 34.397 134.175 104.583 1.00 32.08 P
ATOM 3 OP1 U B2009 33.010 134.476 104.995 1.00 31.78 O
ATOM 4 OP2 U B2009 35.071 135.059 103.615 1.00 30.22 O
ATOM 5 O5' U B2009 35.317 134.078 105.874 1.00 32.07 O
ATOM 6 C5' U B2009 36.336 135.053 106.139 1.00 32.69 C
ATOM 7 C4' U B2009 36.688 135.031 107.610 1.00 32.33 C
ATOM 8 O4' U B2009 35.556 135.517 108.381 1.00 33.05 O
ATOM 9 C3' U B2009 36.965 133.657 108.190 1.00 33.53 C
ATOM 10 O3' U B2009 38.268 133.189 107.916 1.00 32.76 O
ATOM 11 C2' U B2009 36.616 133.819 109.667 1.00 33.02 C
ATOM 12 O2' U B2009 37.672 134.377 110.431 1.00 33.95 O
ATOM 13 C1' U B2009 35.441 134.796 109.600 1.00 31.85 C
ATOM 14 N1 U B2009 34.113 134.144 109.644 1.00 30.82 N
ATOM 15 C2 U B2009 33.534 133.868 110.883 1.00 30.61 C
ATOM 16 O2 U B2009 34.044 134.152 111.948 1.00 31.02 O
ATOM 17 N3 U B2009 32.309 133.242 110.823 1.00 30.71 N
ATOM 18 C4 U B2009 31.609 132.869 109.704 1.00 29.97 C
ATOM 19 O4 U B2009 30.622 132.142 109.834 1.00 29.39 O
ATOM 20 C5 U B2009 32.240 133.205 108.479 1.00 30.26 C
ATOM 21 C6 U B2009 33.441 133.807 108.483 1.00 30.41 C
ATOM 22 P U B2010 38.446 131.815 107.110 1.00 34.40 P
ATOM 23 OP1 U B2010 39.107 132.195 105.852 1.00 31.90 O
ATOM 24 OP2 U B2010 37.146 131.112 107.071 1.00 31.20 O
ATOM 25 O5' U B2010 39.424 130.960 108.027 1.00 33.29 O
TER
Atoms:
OP1: (33.651,135.996,120.965)
OP2: (31.924,134.088,120.910)
C3': (32.326,136.051,116.261)
C1': (32.688,134.072,115.051)
C5': (34.101,135.452,118.049)
O4': (33.690,134.161,116.043)
C8: (31.265,132.841,116.767)
O2': (32.688,136.126,113.854)
C6: (29.258,130.705,114.891)
C5: (30.110,131.606,115.495)
C4: (30.932,132.333,114.672)
P: (33.170,134.709,120.404)
C4': (33.702,135.495,116.593)
C2': (32.045,135.442,114.900)
C2: (30.128,131.394,112.873)
N1: (29.286,130.615,113.548)
N3: (30.990,132.279,113.334)
N6: (28.430,129.931,115.569)
N7: (30.322,131.940,116.822)
N9: (31.680,133.124,115.497)
O5': (33.068,134.830,118.823)
O3': (32.318,137.465,116.194)
OP2: (31.924,134.088,120.910)
C3': (32.326,136.051,116.261)
C1': (32.688,134.072,115.051)
C5': (34.101,135.452,118.049)
O4': (33.690,134.161,116.043)
C8: (31.265,132.841,116.767)
O2': (32.688,136.126,113.854)
C6: (29.258,130.705,114.891)
C5: (30.110,131.606,115.495)
C4: (30.932,132.333,114.672)
P: (33.170,134.709,120.404)
C4': (33.702,135.495,116.593)
C2': (32.045,135.442,114.900)
C2: (30.128,131.394,112.873)
N1: (29.286,130.615,113.548)
N3: (30.990,132.279,113.334)
N6: (28.430,129.931,115.569)
N7: (30.322,131.940,116.822)
N9: (31.680,133.124,115.497)
O5': (33.068,134.830,118.823)
O3': (32.318,137.465,116.194)
C4: (31.609,132.869,109.704)
N3: (32.309,133.242,110.823)
OP1: (33.010,134.476,104.995)
OP2: (35.071,135.059,103.615)
C2: (33.534,133.868,110.883)
C1': (35.441,134.796,109.600)
C3': (36.965,133.657,108.190)
O5': (35.317,134.078,105.874)
O4': (35.556,135.517,108.381)
C5': (36.336,135.053,106.139)
P: (34.397,134.175,104.583)
C4': (36.688,135.031,107.610)
C2': (36.616,133.819,109.667)
O2': (37.672,134.377,110.431)
N1: (34.113,134.144,109.644)
O4: (30.622,132.142,109.834)
O2: (34.044,134.152,111.948)
C6: (33.441,133.807,108.483)
C5: (32.240,133.205,108.479)
O3': (38.268,133.189,107.916)
N3: (32.309,133.242,110.823)
OP1: (33.010,134.476,104.995)
OP2: (35.071,135.059,103.615)
C2: (33.534,133.868,110.883)
C1': (35.441,134.796,109.600)
C3': (36.965,133.657,108.190)
O5': (35.317,134.078,105.874)
O4': (35.556,135.517,108.381)
C5': (36.336,135.053,106.139)
P: (34.397,134.175,104.583)
C4': (36.688,135.031,107.610)
C2': (36.616,133.819,109.667)
O2': (37.672,134.377,110.431)
N1: (34.113,134.144,109.644)
O4: (30.622,132.142,109.834)
O2: (34.044,134.152,111.948)
C6: (33.441,133.807,108.483)
C5: (32.240,133.205,108.479)
O3': (38.268,133.189,107.916)
Image (generated by PyMOL):