ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:02029:02009

Extra

PDB:
ATOM 1 O3' G A2028 34.434 134.179 120.631 1.00 41.26 O
ATOM 2 P A A2029 33.333 135.304 120.325 1.00 43.30 P
ATOM 3 OP1 A A2029 33.862 136.576 120.877 1.00 42.52 O
ATOM 4 OP2 A A2029 32.026 134.789 120.791 1.00 43.67 O
ATOM 5 O5' A A2029 33.289 135.406 118.732 1.00 42.27 O
ATOM 6 C5' A A2029 34.282 136.148 117.997 1.00 41.61 C
ATOM 7 C4' A A2029 33.952 136.159 116.519 1.00 43.24 C
ATOM 8 O4' A A2029 33.961 134.796 116.007 1.00 43.42 O
ATOM 9 C3' A A2029 32.570 136.671 116.137 1.00 43.44 C
ATOM 10 O3' A A2029 32.494 138.091 116.104 1.00 41.94 O
ATOM 11 C2' A A2029 32.374 136.048 114.762 1.00 43.68 C
ATOM 12 O2' A A2029 33.099 136.723 113.756 1.00 44.07 O
ATOM 13 C1' A A2029 32.988 134.663 114.978 1.00 43.21 C
ATOM 14 N9 A A2029 31.984 133.696 115.416 1.00 42.24 N
ATOM 15 C8 A A2029 31.625 133.399 116.703 1.00 42.15 C
ATOM 16 N7 A A2029 30.667 132.511 116.796 1.00 41.42 N
ATOM 17 C5 A A2029 30.382 132.194 115.479 1.00 41.14 C
ATOM 18 C6 A A2029 29.461 131.313 114.908 1.00 40.57 C
ATOM 19 N6 A A2029 28.633 130.561 115.625 1.00 42.39 N
ATOM 20 N1 A A2029 29.418 131.225 113.561 1.00 40.22 N
ATOM 21 C2 A A2029 30.259 131.981 112.848 1.00 42.54 C
ATOM 22 N3 A A2029 31.180 132.849 113.272 1.00 44.35 N
ATOM 23 C4 A A2029 31.189 132.910 114.616 1.00 43.04 C
ATOM 24 P C A2030 31.210 138.836 116.734 1.00 46.30 P
ATOM 25 OP1 C A2030 31.683 139.998 117.531 1.00 42.37 O
ATOM 26 OP2 C A2030 30.324 137.815 117.376 1.00 45.07 O
ATOM 27 O5' C A2030 30.440 139.406 115.464 1.00 43.62 O
TER

ATOM 1 O3' A B2008 34.477 133.258 103.945 1.00 37.85 O
ATOM 2 P U B2009 34.569 134.756 104.508 1.00 39.19 P
ATOM 3 OP1 U B2009 33.204 135.099 104.977 1.00 40.38 O
ATOM 4 OP2 U B2009 35.261 135.643 103.533 1.00 35.62 O
ATOM 5 O5' U B2009 35.479 134.623 105.805 1.00 39.82 O
ATOM 6 C5' U B2009 36.555 135.537 106.053 1.00 37.54 C
ATOM 7 C4' U B2009 36.883 135.553 107.520 1.00 36.90 C
ATOM 8 O4' U B2009 35.731 136.051 108.245 1.00 37.28 O
ATOM 9 C3' U B2009 37.144 134.197 108.157 1.00 37.56 C
ATOM 10 O3' U B2009 38.460 133.705 107.907 1.00 36.68 O
ATOM 11 C2' U B2009 36.857 134.476 109.629 1.00 36.35 C
ATOM 12 O2' U B2009 37.903 135.152 110.299 1.00 34.10 O
ATOM 13 C1' U B2009 35.657 135.417 109.516 1.00 36.55 C
ATOM 14 N1 U B2009 34.365 134.724 109.624 1.00 35.81 N
ATOM 15 C2 U B2009 33.871 134.480 110.895 1.00 37.37 C
ATOM 16 O2 U B2009 34.457 134.805 111.912 1.00 38.15 O
ATOM 17 N3 U B2009 32.659 133.836 110.932 1.00 39.83 N
ATOM 18 C4 U B2009 31.903 133.420 109.857 1.00 39.46 C
ATOM 19 O4 U B2009 30.825 132.862 110.059 1.00 40.58 O
ATOM 20 C5 U B2009 32.483 133.697 108.578 1.00 38.45 C
ATOM 21 C6 U B2009 33.663 134.327 108.507 1.00 35.86 C
ATOM 22 P U B2010 38.646 132.335 107.087 1.00 38.91 P
ATOM 23 OP1 U B2010 39.246 132.736 105.801 1.00 37.99 O
ATOM 24 OP2 U B2010 37.385 131.553 107.102 1.00 38.38 O
ATOM 25 O5' U B2010 39.679 131.466 107.930 1.00 38.03 O
TER

Atoms:
OP1: (33.862,136.576,120.877)
OP2: (32.026,134.789,120.791)
C3': (32.570,136.671,116.137)
C1': (32.988,134.663,114.978)
C5': (34.282,136.148,117.997)
O4': (33.961,134.796,116.007)
C8: (31.625,133.399,116.703)
O2': (33.099,136.723,113.756)
C6: (29.461,131.313,114.908)
C5: (30.382,132.194,115.479)
C4: (31.189,132.910,114.616)
P: (33.333,135.304,120.325)
C4': (33.952,136.159,116.519)
C2': (32.374,136.048,114.762)
C2: (30.259,131.981,112.848)
N1: (29.418,131.225,113.561)
N3: (31.180,132.849,113.272)
N6: (28.633,130.561,115.625)
N7: (30.667,132.511,116.796)
N9: (31.984,133.696,115.416)
O5': (33.289,135.406,118.732)
O3': (32.494,138.091,116.104)
C4: (31.903,133.420,109.857)
N3: (32.659,133.836,110.932)
OP1: (33.204,135.099,104.977)
OP2: (35.261,135.643,103.533)
C2: (33.871,134.480,110.895)
C1': (35.657,135.417,109.516)
C3': (37.144,134.197,108.157)
O5': (35.479,134.623,105.805)
O4': (35.731,136.051,108.245)
C5': (36.555,135.537,106.053)
P: (34.569,134.756,104.508)
C4': (36.883,135.553,107.520)
C2': (36.857,134.476,109.629)
O2': (37.903,135.152,110.299)
N1: (34.365,134.724,109.624)
O4: (30.825,132.862,110.059)
O2: (34.457,134.805,111.912)
C6: (33.663,134.327,108.507)
C5: (32.483,133.697,108.578)
O3': (38.460,133.705,107.907)
Image (generated by PyMOL):
PyMOL image
show in jmol