Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0331:0329
Extra
PDB:
ATOM 1 O3' C A 330 14.718 144.546 29.267 1.00 49.63 O
ATOM 2 P C A 331 15.704 143.893 28.181 1.00 51.22 P
ATOM 3 OP1 C A 331 15.633 144.693 26.931 1.00 52.15 O
ATOM 4 OP2 C A 331 15.414 142.436 28.139 1.00 51.17 O
ATOM 5 O5' C A 331 17.153 144.079 28.815 1.00 50.22 O
ATOM 6 C5' C A 331 17.739 145.386 28.964 1.00 48.21 C
ATOM 7 C4' C A 331 19.105 145.275 29.603 1.00 48.71 C
ATOM 8 O4' C A 331 18.976 144.927 31.013 1.00 49.98 O
ATOM 9 C3' C A 331 20.000 144.182 29.045 1.00 47.14 C
ATOM 10 O3' C A 331 20.627 144.533 27.825 1.00 44.51 O
ATOM 11 C2' C A 331 20.986 143.968 30.182 1.00 48.26 C
ATOM 12 O2' C A 331 21.997 144.954 30.246 1.00 48.62 O
ATOM 13 C1' C A 331 20.063 144.092 31.396 1.00 50.30 C
ATOM 14 N1 C A 331 19.541 142.772 31.816 1.00 52.70 N
ATOM 15 C2 C A 331 20.392 141.911 32.531 1.00 53.26 C
ATOM 16 O2 C A 331 21.534 142.300 32.825 1.00 54.06 O
ATOM 17 N3 C A 331 19.946 140.683 32.885 1.00 53.16 N
ATOM 18 C4 C A 331 18.703 140.310 32.573 1.00 53.54 C
ATOM 19 N4 C A 331 18.306 139.092 32.947 1.00 52.61 N
ATOM 20 C5 C A 331 17.810 141.170 31.865 1.00 53.13 C
ATOM 21 C6 C A 331 18.266 142.378 31.509 1.00 52.68 C
ATOM 22 P C A 332 21.239 143.375 26.895 1.00 45.92 P
ATOM 23 OP1 C A 332 21.807 144.009 25.676 1.00 46.06 O
ATOM 24 OP2 C A 332 20.226 142.298 26.757 1.00 44.52 O
ATOM 25 O5' C A 332 22.459 142.804 27.745 1.00 43.57 O
TER
ATOM 1 O3' A B 328 15.697 134.722 31.658 1.00 46.62 O
ATOM 2 P C B 329 15.066 136.080 32.227 1.00 49.18 P
ATOM 3 OP1 C B 329 16.125 137.117 32.252 1.00 49.42 O
ATOM 4 OP2 C B 329 14.336 135.755 33.469 1.00 48.78 O
ATOM 5 O5' C B 329 13.996 136.494 31.123 1.00 51.99 O
ATOM 6 C5' C B 329 14.411 136.808 29.776 1.00 52.30 C
ATOM 7 C4' C B 329 13.208 137.071 28.901 1.00 52.90 C
ATOM 8 O4' C B 329 12.475 135.839 28.686 1.00 54.67 O
ATOM 9 C3' C B 329 12.170 138.035 29.455 1.00 52.45 C
ATOM 10 O3' C B 329 12.550 139.387 29.234 1.00 47.60 O
ATOM 11 C2' C B 329 10.923 137.645 28.673 1.00 53.94 C
ATOM 12 O2' C B 329 10.916 138.181 27.366 1.00 56.08 O
ATOM 13 C1' C B 329 11.090 136.128 28.578 1.00 54.73 C
ATOM 14 N1 C B 329 10.360 135.394 29.625 1.00 56.54 N
ATOM 15 C2 C B 329 8.971 135.297 29.527 1.00 57.21 C
ATOM 16 O2 C B 329 8.398 135.858 28.585 1.00 59.57 O
ATOM 17 N3 C B 329 8.288 134.601 30.461 1.00 57.21 N
ATOM 18 C4 C B 329 8.940 134.026 31.469 1.00 56.30 C
ATOM 19 N4 C B 329 8.228 133.347 32.365 1.00 56.92 N
ATOM 20 C5 C B 329 10.352 134.121 31.604 1.00 57.69 C
ATOM 21 C6 C B 329 11.018 134.809 30.670 1.00 57.22 C
ATOM 22 P C B 330 11.512 140.572 29.553 1.00 48.68 P
ATOM 23 OP1 C B 330 10.844 140.342 30.858 1.00 46.08 O
ATOM 24 OP2 C B 330 10.682 140.742 28.341 1.00 49.35 O
ATOM 25 O5' C B 330 12.461 141.840 29.676 1.00 47.21 O
TER
ATOM 2 P C A 331 15.704 143.893 28.181 1.00 51.22 P
ATOM 3 OP1 C A 331 15.633 144.693 26.931 1.00 52.15 O
ATOM 4 OP2 C A 331 15.414 142.436 28.139 1.00 51.17 O
ATOM 5 O5' C A 331 17.153 144.079 28.815 1.00 50.22 O
ATOM 6 C5' C A 331 17.739 145.386 28.964 1.00 48.21 C
ATOM 7 C4' C A 331 19.105 145.275 29.603 1.00 48.71 C
ATOM 8 O4' C A 331 18.976 144.927 31.013 1.00 49.98 O
ATOM 9 C3' C A 331 20.000 144.182 29.045 1.00 47.14 C
ATOM 10 O3' C A 331 20.627 144.533 27.825 1.00 44.51 O
ATOM 11 C2' C A 331 20.986 143.968 30.182 1.00 48.26 C
ATOM 12 O2' C A 331 21.997 144.954 30.246 1.00 48.62 O
ATOM 13 C1' C A 331 20.063 144.092 31.396 1.00 50.30 C
ATOM 14 N1 C A 331 19.541 142.772 31.816 1.00 52.70 N
ATOM 15 C2 C A 331 20.392 141.911 32.531 1.00 53.26 C
ATOM 16 O2 C A 331 21.534 142.300 32.825 1.00 54.06 O
ATOM 17 N3 C A 331 19.946 140.683 32.885 1.00 53.16 N
ATOM 18 C4 C A 331 18.703 140.310 32.573 1.00 53.54 C
ATOM 19 N4 C A 331 18.306 139.092 32.947 1.00 52.61 N
ATOM 20 C5 C A 331 17.810 141.170 31.865 1.00 53.13 C
ATOM 21 C6 C A 331 18.266 142.378 31.509 1.00 52.68 C
ATOM 22 P C A 332 21.239 143.375 26.895 1.00 45.92 P
ATOM 23 OP1 C A 332 21.807 144.009 25.676 1.00 46.06 O
ATOM 24 OP2 C A 332 20.226 142.298 26.757 1.00 44.52 O
ATOM 25 O5' C A 332 22.459 142.804 27.745 1.00 43.57 O
TER
ATOM 1 O3' A B 328 15.697 134.722 31.658 1.00 46.62 O
ATOM 2 P C B 329 15.066 136.080 32.227 1.00 49.18 P
ATOM 3 OP1 C B 329 16.125 137.117 32.252 1.00 49.42 O
ATOM 4 OP2 C B 329 14.336 135.755 33.469 1.00 48.78 O
ATOM 5 O5' C B 329 13.996 136.494 31.123 1.00 51.99 O
ATOM 6 C5' C B 329 14.411 136.808 29.776 1.00 52.30 C
ATOM 7 C4' C B 329 13.208 137.071 28.901 1.00 52.90 C
ATOM 8 O4' C B 329 12.475 135.839 28.686 1.00 54.67 O
ATOM 9 C3' C B 329 12.170 138.035 29.455 1.00 52.45 C
ATOM 10 O3' C B 329 12.550 139.387 29.234 1.00 47.60 O
ATOM 11 C2' C B 329 10.923 137.645 28.673 1.00 53.94 C
ATOM 12 O2' C B 329 10.916 138.181 27.366 1.00 56.08 O
ATOM 13 C1' C B 329 11.090 136.128 28.578 1.00 54.73 C
ATOM 14 N1 C B 329 10.360 135.394 29.625 1.00 56.54 N
ATOM 15 C2 C B 329 8.971 135.297 29.527 1.00 57.21 C
ATOM 16 O2 C B 329 8.398 135.858 28.585 1.00 59.57 O
ATOM 17 N3 C B 329 8.288 134.601 30.461 1.00 57.21 N
ATOM 18 C4 C B 329 8.940 134.026 31.469 1.00 56.30 C
ATOM 19 N4 C B 329 8.228 133.347 32.365 1.00 56.92 N
ATOM 20 C5 C B 329 10.352 134.121 31.604 1.00 57.69 C
ATOM 21 C6 C B 329 11.018 134.809 30.670 1.00 57.22 C
ATOM 22 P C B 330 11.512 140.572 29.553 1.00 48.68 P
ATOM 23 OP1 C B 330 10.844 140.342 30.858 1.00 46.08 O
ATOM 24 OP2 C B 330 10.682 140.742 28.341 1.00 49.35 O
ATOM 25 O5' C B 330 12.461 141.840 29.676 1.00 47.21 O
TER
Atoms:
C2: (20.392,141.911,32.531)
OP1: (15.633,144.693,26.931)
OP2: (15.414,142.436,28.139)
C4: (18.703,140.310,32.573)
O5': (17.153,144.079,28.815)
C3': (20.000,144.182,29.045)
C1': (20.063,144.092,31.396)
O4': (18.976,144.927,31.013)
C5': (17.739,145.386,28.964)
P: (15.704,143.893,28.181)
O2: (21.534,142.300,32.825)
C4': (19.105,145.275,29.603)
C2': (20.986,143.968,30.182)
O2': (21.997,144.954,30.246)
N1: (19.541,142.772,31.816)
N3: (19.946,140.683,32.885)
N4: (18.306,139.092,32.947)
C6: (18.266,142.378,31.509)
C5: (17.810,141.170,31.865)
O3': (20.627,144.533,27.825)
OP1: (15.633,144.693,26.931)
OP2: (15.414,142.436,28.139)
C4: (18.703,140.310,32.573)
O5': (17.153,144.079,28.815)
C3': (20.000,144.182,29.045)
C1': (20.063,144.092,31.396)
O4': (18.976,144.927,31.013)
C5': (17.739,145.386,28.964)
P: (15.704,143.893,28.181)
O2: (21.534,142.300,32.825)
C4': (19.105,145.275,29.603)
C2': (20.986,143.968,30.182)
O2': (21.997,144.954,30.246)
N1: (19.541,142.772,31.816)
N3: (19.946,140.683,32.885)
N4: (18.306,139.092,32.947)
C6: (18.266,142.378,31.509)
C5: (17.810,141.170,31.865)
O3': (20.627,144.533,27.825)
C2: (8.971,135.297,29.527)
OP1: (16.125,137.117,32.252)
OP2: (14.336,135.755,33.469)
C4: (8.940,134.026,31.469)
O5': (13.996,136.494,31.123)
C3': (12.170,138.035,29.455)
C1': (11.090,136.128,28.578)
O4': (12.475,135.839,28.686)
C5': (14.411,136.808,29.776)
P: (15.066,136.080,32.227)
O2: (8.398,135.858,28.585)
C4': (13.208,137.071,28.901)
C2': (10.923,137.645,28.673)
O2': (10.916,138.181,27.366)
N1: (10.360,135.394,29.625)
N3: (8.288,134.601,30.461)
N4: (8.228,133.347,32.365)
C6: (11.018,134.809,30.670)
C5: (10.352,134.121,31.604)
O3': (12.550,139.387,29.234)
OP1: (16.125,137.117,32.252)
OP2: (14.336,135.755,33.469)
C4: (8.940,134.026,31.469)
O5': (13.996,136.494,31.123)
C3': (12.170,138.035,29.455)
C1': (11.090,136.128,28.578)
O4': (12.475,135.839,28.686)
C5': (14.411,136.808,29.776)
P: (15.066,136.080,32.227)
O2: (8.398,135.858,28.585)
C4': (13.208,137.071,28.901)
C2': (10.923,137.645,28.673)
O2': (10.916,138.181,27.366)
N1: (10.360,135.394,29.625)
N3: (8.288,134.601,30.461)
N4: (8.228,133.347,32.365)
C6: (11.018,134.809,30.670)
C5: (10.352,134.121,31.604)
O3': (12.550,139.387,29.234)
Image (generated by PyMOL):