ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:02029:02009

Extra

PDB:
ATOM 1 O3' G A2028 34.258 132.839 120.608 1.00 37.04 O
ATOM 2 P A A2029 33.103 133.923 120.350 1.00 38.72 P
ATOM 3 OP1 A A2029 33.544 135.213 120.907 1.00 42.29 O
ATOM 4 OP2 A A2029 31.829 133.324 120.818 1.00 43.09 O
ATOM 5 O5' A A2029 33.031 134.049 118.764 1.00 38.44 O
ATOM 6 C5' A A2029 34.097 134.654 118.013 1.00 34.37 C
ATOM 7 C4' A A2029 33.746 134.684 116.539 1.00 35.43 C
ATOM 8 O4' A A2029 33.722 133.335 115.991 1.00 32.64 O
ATOM 9 C3' A A2029 32.363 135.223 116.220 1.00 35.21 C
ATOM 10 O3' A A2029 32.336 136.636 116.228 1.00 38.55 O
ATOM 11 C2' A A2029 32.096 134.641 114.841 1.00 35.16 C
ATOM 12 O2' A A2029 32.743 135.357 113.813 1.00 34.02 O
ATOM 13 C1' A A2029 32.716 133.250 114.986 1.00 34.53 C
ATOM 14 N9 A A2029 31.716 132.268 115.405 1.00 35.51 N
ATOM 15 C8 A A2029 31.403 131.869 116.683 1.00 35.71 C
ATOM 16 N7 A A2029 30.435 130.989 116.741 1.00 34.11 N
ATOM 17 C5 A A2029 30.089 130.787 115.414 1.00 36.86 C
ATOM 18 C6 A A2029 29.133 129.970 114.807 1.00 36.46 C
ATOM 19 N6 A A2029 28.304 129.186 115.488 1.00 39.64 N
ATOM 20 N1 A A2029 29.052 129.988 113.460 1.00 36.35 N
ATOM 21 C2 A A2029 29.876 130.785 112.781 1.00 35.84 C
ATOM 22 N3 A A2029 30.813 131.608 113.235 1.00 36.95 N
ATOM 23 C4 A A2029 30.874 131.562 114.578 1.00 37.27 C
ATOM 24 P C A2030 31.091 137.404 116.895 1.00 40.88 P
ATOM 25 OP1 C A2030 31.652 138.550 117.642 1.00 41.53 O
ATOM 26 OP2 C A2030 30.222 136.412 117.595 1.00 41.13 O
ATOM 27 O5' C A2030 30.294 137.989 115.651 1.00 39.59 O
TER

ATOM 1 O3' A B2008 34.340 131.886 103.904 1.00 33.92 O
ATOM 2 P U B2009 34.459 133.380 104.477 1.00 32.29 P
ATOM 3 OP1 U B2009 33.132 133.704 105.019 1.00 32.71 O
ATOM 4 OP2 U B2009 35.064 134.258 103.443 1.00 34.67 O
ATOM 5 O5' U B2009 35.461 133.205 105.697 1.00 34.93 O
ATOM 6 C5' U B2009 36.459 134.184 106.005 1.00 33.47 C
ATOM 7 C4' U B2009 36.750 134.162 107.486 1.00 33.32 C
ATOM 8 O4' U B2009 35.589 134.667 108.194 1.00 34.87 O
ATOM 9 C3' U B2009 36.971 132.787 108.103 1.00 31.90 C
ATOM 10 O3' U B2009 38.281 132.273 107.901 1.00 30.49 O
ATOM 11 C2' U B2009 36.648 133.042 109.568 1.00 31.98 C
ATOM 12 O2' U B2009 37.665 133.734 110.245 1.00 31.10 O
ATOM 13 C1' U B2009 35.461 133.994 109.445 1.00 35.06 C
ATOM 14 N1 U B2009 34.155 133.314 109.505 1.00 36.18 N
ATOM 15 C2 U B2009 33.644 133.024 110.760 1.00 37.46 C
ATOM 16 O2 U B2009 34.221 133.297 111.789 1.00 40.62 O
ATOM 17 N3 U B2009 32.421 132.403 110.765 1.00 41.09 N
ATOM 18 C4 U B2009 31.665 132.046 109.668 1.00 40.62 C
ATOM 19 O4 U B2009 30.574 131.497 109.841 1.00 40.39 O
ATOM 20 C5 U B2009 32.262 132.369 108.398 1.00 37.63 C
ATOM 21 C6 U B2009 33.455 132.976 108.362 1.00 34.33 C
ATOM 22 P U B2010 38.468 130.896 107.099 1.00 34.34 P
ATOM 23 OP1 U B2010 38.825 131.254 105.715 1.00 31.66 O
ATOM 24 OP2 U B2010 37.273 130.047 107.347 1.00 35.35 O
ATOM 25 O5' U B2010 39.657 130.116 107.829 1.00 33.56 O
TER

Atoms:
OP1: (33.544,135.213,120.907)
OP2: (31.829,133.324,120.818)
C3': (32.363,135.223,116.220)
C1': (32.716,133.250,114.986)
C5': (34.097,134.654,118.013)
O4': (33.722,133.335,115.991)
C8: (31.403,131.869,116.683)
O2': (32.743,135.357,113.813)
C6: (29.133,129.970,114.807)
C5: (30.089,130.787,115.414)
C4: (30.874,131.562,114.578)
P: (33.103,133.923,120.350)
C4': (33.746,134.684,116.539)
C2': (32.096,134.641,114.841)
C2: (29.876,130.785,112.781)
N1: (29.052,129.988,113.460)
N3: (30.813,131.608,113.235)
N6: (28.304,129.186,115.488)
N7: (30.435,130.989,116.741)
N9: (31.716,132.268,115.405)
O5': (33.031,134.049,118.764)
O3': (32.336,136.636,116.228)
C4: (31.665,132.046,109.668)
N3: (32.421,132.403,110.765)
OP1: (33.132,133.704,105.019)
OP2: (35.064,134.258,103.443)
C2: (33.644,133.024,110.760)
C1': (35.461,133.994,109.445)
C3': (36.971,132.787,108.103)
O5': (35.461,133.205,105.697)
O4': (35.589,134.667,108.194)
C5': (36.459,134.184,106.005)
P: (34.459,133.380,104.477)
C4': (36.750,134.162,107.486)
C2': (36.648,133.042,109.568)
O2': (37.665,133.734,110.245)
N1: (34.155,133.314,109.505)
O4: (30.574,131.497,109.841)
O2: (34.221,133.297,111.789)
C6: (33.455,132.976,108.362)
C5: (32.262,132.369,108.398)
O3': (38.281,132.273,107.901)
Image (generated by PyMOL):
PyMOL image
show in jmol