ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:0317:0334

Extra

PDB:
ATOM 1 O3' U A 316 18.431 124.023 21.777 1.00 56.29 O
ATOM 2 P A A 317 17.949 123.961 23.314 1.00 54.11 P
ATOM 3 OP1 A A 317 18.783 122.912 23.952 1.00 57.03 O
ATOM 4 OP2 A A 317 16.473 123.844 23.349 1.00 53.34 O
ATOM 5 O5' A A 317 18.321 125.389 23.927 1.00 55.17 O
ATOM 6 C5' A A 317 19.518 125.581 24.721 1.00 53.02 C
ATOM 7 C4' A A 317 19.532 126.967 25.339 1.00 51.91 C
ATOM 8 O4' A A 317 19.447 127.955 24.276 1.00 53.97 O
ATOM 9 C3' A A 317 18.396 127.300 26.303 1.00 51.19 C
ATOM 10 O3' A A 317 18.819 128.323 27.212 1.00 50.79 O
ATOM 11 C2' A A 317 17.384 127.962 25.379 1.00 52.24 C
ATOM 12 O2' A A 317 16.486 128.796 26.084 1.00 49.44 O
ATOM 13 C1' A A 317 18.318 128.776 24.484 1.00 52.99 C
ATOM 14 N9 A A 317 17.799 129.171 23.175 1.00 55.62 N
ATOM 15 C8 A A 317 17.082 128.426 22.273 1.00 54.25 C
ATOM 16 N7 A A 317 16.780 129.074 21.178 1.00 55.03 N
ATOM 17 C5 A A 317 17.334 130.331 21.367 1.00 56.73 C
ATOM 18 C6 A A 317 17.362 131.489 20.561 1.00 57.40 C
ATOM 19 N6 A A 317 16.808 131.562 19.349 1.00 56.35 N
ATOM 20 N1 A A 317 17.990 132.580 21.052 1.00 56.56 N
ATOM 21 C2 A A 317 18.551 132.504 22.261 1.00 56.53 C
ATOM 22 N3 A A 317 18.596 131.477 23.108 1.00 57.12 N
ATOM 23 C4 A A 317 17.960 130.407 22.595 1.00 56.80 C
ATOM 24 P C A 318 19.618 127.950 28.557 1.00 48.86 P
ATOM 25 OP1 C A 318 19.558 129.176 29.387 1.00 46.22 O
ATOM 26 OP2 C A 318 20.934 127.354 28.217 1.00 44.32 O
ATOM 27 O5' C A 318 18.730 126.822 29.255 1.00 49.41 O
TER

ATOM 1 O3' G B 333 27.293 134.443 26.702 1.00 52.18 O
ATOM 2 P U B 334 27.343 133.246 25.640 1.00 55.05 P
ATOM 3 OP1 U B 334 28.683 132.617 25.721 1.00 54.60 O
ATOM 4 OP2 U B 334 26.871 133.788 24.341 1.00 58.39 O
ATOM 5 O5' U B 334 26.256 132.202 26.163 1.00 53.90 O
ATOM 6 C5' U B 334 26.528 131.321 27.273 1.00 51.79 C
ATOM 7 C4' U B 334 25.371 130.371 27.478 1.00 51.52 C
ATOM 8 O4' U B 334 24.182 131.132 27.822 1.00 51.45 O
ATOM 9 C3' U B 334 24.975 129.573 26.247 1.00 51.62 C
ATOM 10 O3' U B 334 25.779 128.402 26.112 1.00 51.03 O
ATOM 11 C2' U B 334 23.507 129.267 26.510 1.00 51.50 C
ATOM 12 O2' U B 334 23.333 128.199 27.415 1.00 52.72 O
ATOM 13 C1' U B 334 23.049 130.558 27.193 1.00 52.92 C
ATOM 14 N1 U B 334 22.457 131.559 26.288 1.00 56.00 N
ATOM 15 C2 U B 334 21.164 131.342 25.833 1.00 57.01 C
ATOM 16 O2 U B 334 20.513 130.353 26.125 1.00 57.87 O
ATOM 17 N3 U B 334 20.662 132.326 25.019 1.00 57.45 N
ATOM 18 C4 U B 334 21.307 133.471 24.606 1.00 58.23 C
ATOM 19 O4 U B 334 20.722 134.263 23.865 1.00 57.23 O
ATOM 20 C5 U B 334 22.640 133.616 25.105 1.00 57.72 C
ATOM 21 C6 U B 334 23.155 132.682 25.908 1.00 55.59 C
ATOM 22 P A B 335 26.327 127.972 24.662 1.00 54.49 P
ATOM 23 OP1 A B 335 27.295 126.861 24.837 1.00 54.07 O
ATOM 24 OP2 A B 335 26.745 129.196 23.925 1.00 54.52 O
ATOM 25 O5' A B 335 25.039 127.393 23.927 1.00 55.34 O
TER

Atoms:
OP1: (18.783,122.912,23.952)
OP2: (16.473,123.844,23.349)
C3': (18.396,127.300,26.303)
C1': (18.318,128.776,24.484)
C5': (19.518,125.581,24.721)
O4': (19.447,127.955,24.276)
C8: (17.082,128.426,22.273)
O2': (16.486,128.796,26.084)
C6: (17.362,131.489,20.561)
C5: (17.334,130.331,21.367)
C4: (17.960,130.407,22.595)
P: (17.949,123.961,23.314)
C4': (19.532,126.967,25.339)
C2': (17.384,127.962,25.379)
C2: (18.551,132.504,22.261)
N1: (17.990,132.580,21.052)
N3: (18.596,131.477,23.108)
N6: (16.808,131.562,19.349)
N7: (16.780,129.074,21.178)
N9: (17.799,129.171,23.175)
O5': (18.321,125.389,23.927)
O3': (18.819,128.323,27.212)
C4: (21.307,133.471,24.606)
N3: (20.662,132.326,25.019)
OP1: (28.683,132.617,25.721)
OP2: (26.871,133.788,24.341)
C2: (21.164,131.342,25.833)
C1': (23.049,130.558,27.193)
C3': (24.975,129.573,26.247)
O5': (26.256,132.202,26.163)
O4': (24.182,131.132,27.822)
C5': (26.528,131.321,27.273)
P: (27.343,133.246,25.640)
C4': (25.371,130.371,27.478)
C2': (23.507,129.267,26.510)
O2': (23.333,128.199,27.415)
N1: (22.457,131.559,26.288)
O4: (20.722,134.263,23.865)
O2: (20.513,130.353,26.125)
C6: (23.155,132.682,25.908)
C5: (22.640,133.616,25.105)
O3': (25.779,128.402,26.112)
Image (generated by PyMOL):
PyMOL image
show in jmol