ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:02029:02009

Extra

PDB:
ATOM 1 O3' G A2028 34.393 133.298 120.600 1.00 36.08 O
ATOM 2 P A A2029 33.253 134.402 120.339 1.00 37.62 P
ATOM 3 OP1 A A2029 33.744 135.688 120.860 1.00 42.91 O
ATOM 4 OP2 A A2029 31.966 133.863 120.830 1.00 43.39 O
ATOM 5 O5' A A2029 33.160 134.500 118.748 1.00 40.30 O
ATOM 6 C5' A A2029 34.189 135.148 117.978 1.00 36.75 C
ATOM 7 C4' A A2029 33.816 135.166 116.511 1.00 36.13 C
ATOM 8 O4' A A2029 33.817 133.816 115.969 1.00 35.44 O
ATOM 9 C3' A A2029 32.418 135.676 116.195 1.00 37.11 C
ATOM 10 O3' A A2029 32.371 137.093 116.209 1.00 39.47 O
ATOM 11 C2' A A2029 32.182 135.096 114.806 1.00 37.89 C
ATOM 12 O2' A A2029 32.848 135.825 113.791 1.00 36.15 O
ATOM 13 C1' A A2029 32.825 133.711 114.952 1.00 36.30 C
ATOM 14 N9 A A2029 31.829 132.720 115.367 1.00 35.86 N
ATOM 15 C8 A A2029 31.530 132.307 116.644 1.00 37.83 C
ATOM 16 N7 A A2029 30.538 131.451 116.706 1.00 36.50 N
ATOM 17 C5 A A2029 30.168 131.277 115.382 1.00 38.17 C
ATOM 18 C6 A A2029 29.179 130.494 114.781 1.00 38.53 C
ATOM 19 N6 A A2029 28.331 129.732 115.470 1.00 41.63 N
ATOM 20 N1 A A2029 29.082 130.523 113.433 1.00 37.75 N
ATOM 21 C2 A A2029 29.927 131.301 112.747 1.00 36.88 C
ATOM 22 N3 A A2029 30.894 132.093 113.198 1.00 37.13 N
ATOM 23 C4 A A2029 30.965 132.037 114.543 1.00 37.95 C
ATOM 24 P C A2030 31.133 137.851 116.908 1.00 42.02 P
ATOM 25 OP1 C A2030 31.714 138.992 117.648 1.00 42.55 O
ATOM 26 OP2 C A2030 30.257 136.881 117.622 1.00 41.70 O
ATOM 27 O5' C A2030 30.325 138.456 115.675 1.00 41.24 O
TER

ATOM 1 O3' A B2008 34.465 132.408 103.916 1.00 35.42 O
ATOM 2 P U B2009 34.562 133.915 104.459 1.00 31.81 P
ATOM 3 OP1 U B2009 33.219 134.258 104.946 1.00 33.45 O
ATOM 4 OP2 U B2009 35.205 134.779 103.443 1.00 36.90 O
ATOM 5 O5' U B2009 35.514 133.752 105.727 1.00 34.58 O
ATOM 6 C5' U B2009 36.573 134.681 106.018 1.00 33.95 C
ATOM 7 C4' U B2009 36.886 134.656 107.503 1.00 33.11 C
ATOM 8 O4' U B2009 35.740 135.178 108.226 1.00 34.12 O
ATOM 9 C3' U B2009 37.088 133.272 108.105 1.00 31.46 C
ATOM 10 O3' U B2009 38.387 132.746 107.910 1.00 30.54 O
ATOM 11 C2' U B2009 36.752 133.496 109.574 1.00 32.33 C
ATOM 12 O2' U B2009 37.769 134.112 110.321 1.00 30.55 O
ATOM 13 C1' U B2009 35.594 134.484 109.461 1.00 33.87 C
ATOM 14 N1 U B2009 34.282 133.816 109.495 1.00 35.74 N
ATOM 15 C2 U B2009 33.740 133.550 110.742 1.00 34.49 C
ATOM 16 O2 U B2009 34.291 133.837 111.776 1.00 37.68 O
ATOM 17 N3 U B2009 32.520 132.933 110.729 1.00 37.21 N
ATOM 18 C4 U B2009 31.787 132.562 109.626 1.00 37.85 C
ATOM 19 O4 U B2009 30.688 132.023 109.790 1.00 39.53 O
ATOM 20 C5 U B2009 32.413 132.858 108.362 1.00 35.63 C
ATOM 21 C6 U B2009 33.608 133.461 108.341 1.00 32.53 C
ATOM 22 P U B2010 38.563 131.395 107.070 1.00 34.17 P
ATOM 23 OP1 U B2010 38.869 131.826 105.689 1.00 35.46 O
ATOM 24 OP2 U B2010 37.391 130.522 107.325 1.00 33.46 O
ATOM 25 O5' U B2010 39.789 130.606 107.725 1.00 34.17 O
TER

Atoms:
OP1: (33.744,135.688,120.860)
OP2: (31.966,133.863,120.830)
C3': (32.418,135.676,116.195)
C1': (32.825,133.711,114.952)
C5': (34.189,135.148,117.978)
O4': (33.817,133.816,115.969)
C8: (31.530,132.307,116.644)
O2': (32.848,135.825,113.791)
C6: (29.179,130.494,114.781)
C5: (30.168,131.277,115.382)
C4: (30.965,132.037,114.543)
P: (33.253,134.402,120.339)
C4': (33.816,135.166,116.511)
C2': (32.182,135.096,114.806)
C2: (29.927,131.301,112.747)
N1: (29.082,130.523,113.433)
N3: (30.894,132.093,113.198)
N6: (28.331,129.732,115.470)
N7: (30.538,131.451,116.706)
N9: (31.829,132.720,115.367)
O5': (33.160,134.500,118.748)
O3': (32.371,137.093,116.209)
C4: (31.787,132.562,109.626)
N3: (32.520,132.933,110.729)
OP1: (33.219,134.258,104.946)
OP2: (35.205,134.779,103.443)
C2: (33.740,133.550,110.742)
C1': (35.594,134.484,109.461)
C3': (37.088,133.272,108.105)
O5': (35.514,133.752,105.727)
O4': (35.740,135.178,108.226)
C5': (36.573,134.681,106.018)
P: (34.562,133.915,104.459)
C4': (36.886,134.656,107.503)
C2': (36.752,133.496,109.574)
O2': (37.769,134.112,110.321)
N1: (34.282,133.816,109.495)
O4: (30.688,132.023,109.790)
O2: (34.291,133.837,111.776)
C6: (33.608,133.461,108.341)
C5: (32.413,132.858,108.362)
O3': (38.387,132.746,107.910)
Image (generated by PyMOL):
PyMOL image
show in jmol