Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02029:02009
Extra
PDB:
ATOM 1 O3' G A2028 34.311 133.666 120.248 1.00 37.02 O
ATOM 2 P A A2029 33.229 134.792 119.878 1.00 38.45 P
ATOM 3 OP1 A A2029 33.736 136.083 120.395 1.00 37.47 O
ATOM 4 OP2 A A2029 31.890 134.308 120.292 1.00 40.07 O
ATOM 5 O5' A A2029 33.240 134.845 118.288 1.00 40.11 O
ATOM 6 C5' A A2029 34.260 135.554 117.567 1.00 38.33 C
ATOM 7 C4' A A2029 33.902 135.605 116.106 1.00 39.36 C
ATOM 8 O4' A A2029 33.872 134.254 115.566 1.00 40.05 O
ATOM 9 C3' A A2029 32.506 136.126 115.824 1.00 39.15 C
ATOM 10 O3' A A2029 32.450 137.541 115.867 1.00 39.24 O
ATOM 11 C2' A A2029 32.220 135.539 114.450 1.00 39.25 C
ATOM 12 O2' A A2029 32.870 136.231 113.405 1.00 38.61 O
ATOM 13 C1' A A2029 32.844 134.150 114.593 1.00 38.99 C
ATOM 14 N9 A A2029 31.874 133.157 115.052 1.00 38.95 N
ATOM 15 C8 A A2029 31.559 132.819 116.344 1.00 38.71 C
ATOM 16 N7 A A2029 30.622 131.907 116.437 1.00 37.95 N
ATOM 17 C5 A A2029 30.304 131.620 115.119 1.00 38.53 C
ATOM 18 C6 A A2029 29.382 130.733 114.542 1.00 39.31 C
ATOM 19 N6 A A2029 28.589 129.931 115.250 1.00 41.01 N
ATOM 20 N1 A A2029 29.303 130.693 113.196 1.00 38.66 N
ATOM 21 C2 A A2029 30.107 131.485 112.488 1.00 41.11 C
ATOM 22 N3 A A2029 31.022 132.357 112.913 1.00 41.56 N
ATOM 23 C4 A A2029 31.070 132.378 114.255 1.00 39.54 C
ATOM 24 P C A2030 31.185 138.263 116.539 1.00 39.98 P
ATOM 25 OP1 C A2030 31.668 139.391 117.367 1.00 41.71 O
ATOM 26 OP2 C A2030 30.340 137.207 117.159 1.00 41.84 O
ATOM 27 O5' C A2030 30.397 138.877 115.301 1.00 38.62 O
TER
ATOM 1 O3' A B2008 34.496 132.705 103.658 1.00 31.48 O
ATOM 2 P U B2009 34.553 134.211 104.213 1.00 34.91 P
ATOM 3 OP1 U B2009 33.181 134.569 104.652 1.00 33.46 O
ATOM 4 OP2 U B2009 35.264 135.080 103.230 1.00 32.32 O
ATOM 5 O5' U B2009 35.438 134.094 105.528 1.00 33.92 O
ATOM 6 C5' U B2009 36.503 135.015 105.790 1.00 33.61 C
ATOM 7 C4' U B2009 36.831 135.018 107.261 1.00 34.82 C
ATOM 8 O4' U B2009 35.689 135.526 108.000 1.00 34.14 O
ATOM 9 C3' U B2009 37.089 133.655 107.884 1.00 34.92 C
ATOM 10 O3' U B2009 38.404 133.160 107.632 1.00 35.09 O
ATOM 11 C2' U B2009 36.800 133.920 109.356 1.00 33.58 C
ATOM 12 O2' U B2009 37.852 134.584 110.027 1.00 29.41 O
ATOM 13 C1' U B2009 35.596 134.859 109.250 1.00 34.32 C
ATOM 14 N1 U B2009 34.300 134.162 109.316 1.00 34.63 N
ATOM 15 C2 U B2009 33.804 133.848 110.564 1.00 35.01 C
ATOM 16 O2 U B2009 34.391 134.114 111.594 1.00 37.30 O
ATOM 17 N3 U B2009 32.591 133.208 110.565 1.00 35.75 N
ATOM 18 C4 U B2009 31.838 132.855 109.469 1.00 37.30 C
ATOM 19 O4 U B2009 30.770 132.256 109.632 1.00 37.45 O
ATOM 20 C5 U B2009 32.418 133.211 108.212 1.00 37.02 C
ATOM 21 C6 U B2009 33.599 133.835 108.179 1.00 35.28 C
ATOM 22 P U B2010 38.588 131.816 106.767 1.00 36.59 P
ATOM 23 OP1 U B2010 39.204 132.215 105.483 1.00 37.79 O
ATOM 24 OP2 U B2010 37.313 131.079 106.766 1.00 40.00 O
ATOM 25 O5' U B2010 39.608 130.921 107.594 1.00 36.00 O
TER
ATOM 2 P A A2029 33.229 134.792 119.878 1.00 38.45 P
ATOM 3 OP1 A A2029 33.736 136.083 120.395 1.00 37.47 O
ATOM 4 OP2 A A2029 31.890 134.308 120.292 1.00 40.07 O
ATOM 5 O5' A A2029 33.240 134.845 118.288 1.00 40.11 O
ATOM 6 C5' A A2029 34.260 135.554 117.567 1.00 38.33 C
ATOM 7 C4' A A2029 33.902 135.605 116.106 1.00 39.36 C
ATOM 8 O4' A A2029 33.872 134.254 115.566 1.00 40.05 O
ATOM 9 C3' A A2029 32.506 136.126 115.824 1.00 39.15 C
ATOM 10 O3' A A2029 32.450 137.541 115.867 1.00 39.24 O
ATOM 11 C2' A A2029 32.220 135.539 114.450 1.00 39.25 C
ATOM 12 O2' A A2029 32.870 136.231 113.405 1.00 38.61 O
ATOM 13 C1' A A2029 32.844 134.150 114.593 1.00 38.99 C
ATOM 14 N9 A A2029 31.874 133.157 115.052 1.00 38.95 N
ATOM 15 C8 A A2029 31.559 132.819 116.344 1.00 38.71 C
ATOM 16 N7 A A2029 30.622 131.907 116.437 1.00 37.95 N
ATOM 17 C5 A A2029 30.304 131.620 115.119 1.00 38.53 C
ATOM 18 C6 A A2029 29.382 130.733 114.542 1.00 39.31 C
ATOM 19 N6 A A2029 28.589 129.931 115.250 1.00 41.01 N
ATOM 20 N1 A A2029 29.303 130.693 113.196 1.00 38.66 N
ATOM 21 C2 A A2029 30.107 131.485 112.488 1.00 41.11 C
ATOM 22 N3 A A2029 31.022 132.357 112.913 1.00 41.56 N
ATOM 23 C4 A A2029 31.070 132.378 114.255 1.00 39.54 C
ATOM 24 P C A2030 31.185 138.263 116.539 1.00 39.98 P
ATOM 25 OP1 C A2030 31.668 139.391 117.367 1.00 41.71 O
ATOM 26 OP2 C A2030 30.340 137.207 117.159 1.00 41.84 O
ATOM 27 O5' C A2030 30.397 138.877 115.301 1.00 38.62 O
TER
ATOM 1 O3' A B2008 34.496 132.705 103.658 1.00 31.48 O
ATOM 2 P U B2009 34.553 134.211 104.213 1.00 34.91 P
ATOM 3 OP1 U B2009 33.181 134.569 104.652 1.00 33.46 O
ATOM 4 OP2 U B2009 35.264 135.080 103.230 1.00 32.32 O
ATOM 5 O5' U B2009 35.438 134.094 105.528 1.00 33.92 O
ATOM 6 C5' U B2009 36.503 135.015 105.790 1.00 33.61 C
ATOM 7 C4' U B2009 36.831 135.018 107.261 1.00 34.82 C
ATOM 8 O4' U B2009 35.689 135.526 108.000 1.00 34.14 O
ATOM 9 C3' U B2009 37.089 133.655 107.884 1.00 34.92 C
ATOM 10 O3' U B2009 38.404 133.160 107.632 1.00 35.09 O
ATOM 11 C2' U B2009 36.800 133.920 109.356 1.00 33.58 C
ATOM 12 O2' U B2009 37.852 134.584 110.027 1.00 29.41 O
ATOM 13 C1' U B2009 35.596 134.859 109.250 1.00 34.32 C
ATOM 14 N1 U B2009 34.300 134.162 109.316 1.00 34.63 N
ATOM 15 C2 U B2009 33.804 133.848 110.564 1.00 35.01 C
ATOM 16 O2 U B2009 34.391 134.114 111.594 1.00 37.30 O
ATOM 17 N3 U B2009 32.591 133.208 110.565 1.00 35.75 N
ATOM 18 C4 U B2009 31.838 132.855 109.469 1.00 37.30 C
ATOM 19 O4 U B2009 30.770 132.256 109.632 1.00 37.45 O
ATOM 20 C5 U B2009 32.418 133.211 108.212 1.00 37.02 C
ATOM 21 C6 U B2009 33.599 133.835 108.179 1.00 35.28 C
ATOM 22 P U B2010 38.588 131.816 106.767 1.00 36.59 P
ATOM 23 OP1 U B2010 39.204 132.215 105.483 1.00 37.79 O
ATOM 24 OP2 U B2010 37.313 131.079 106.766 1.00 40.00 O
ATOM 25 O5' U B2010 39.608 130.921 107.594 1.00 36.00 O
TER
Atoms:
OP1: (33.736,136.083,120.395)
OP2: (31.890,134.308,120.292)
C3': (32.506,136.126,115.824)
C1': (32.844,134.150,114.593)
C5': (34.260,135.554,117.567)
O4': (33.872,134.254,115.566)
C8: (31.559,132.819,116.344)
O2': (32.870,136.231,113.405)
C6: (29.382,130.733,114.542)
C5: (30.304,131.620,115.119)
C4: (31.070,132.378,114.255)
P: (33.229,134.792,119.878)
C4': (33.902,135.605,116.106)
C2': (32.220,135.539,114.450)
C2: (30.107,131.485,112.488)
N1: (29.303,130.693,113.196)
N3: (31.022,132.357,112.913)
N6: (28.589,129.931,115.250)
N7: (30.622,131.907,116.437)
N9: (31.874,133.157,115.052)
O5': (33.240,134.845,118.288)
O3': (32.450,137.541,115.867)
OP2: (31.890,134.308,120.292)
C3': (32.506,136.126,115.824)
C1': (32.844,134.150,114.593)
C5': (34.260,135.554,117.567)
O4': (33.872,134.254,115.566)
C8: (31.559,132.819,116.344)
O2': (32.870,136.231,113.405)
C6: (29.382,130.733,114.542)
C5: (30.304,131.620,115.119)
C4: (31.070,132.378,114.255)
P: (33.229,134.792,119.878)
C4': (33.902,135.605,116.106)
C2': (32.220,135.539,114.450)
C2: (30.107,131.485,112.488)
N1: (29.303,130.693,113.196)
N3: (31.022,132.357,112.913)
N6: (28.589,129.931,115.250)
N7: (30.622,131.907,116.437)
N9: (31.874,133.157,115.052)
O5': (33.240,134.845,118.288)
O3': (32.450,137.541,115.867)
C4: (31.838,132.855,109.469)
N3: (32.591,133.208,110.565)
OP1: (33.181,134.569,104.652)
OP2: (35.264,135.080,103.230)
C2: (33.804,133.848,110.564)
C1': (35.596,134.859,109.250)
C3': (37.089,133.655,107.884)
O5': (35.438,134.094,105.528)
O4': (35.689,135.526,108.000)
C5': (36.503,135.015,105.790)
P: (34.553,134.211,104.213)
C4': (36.831,135.018,107.261)
C2': (36.800,133.920,109.356)
O2': (37.852,134.584,110.027)
N1: (34.300,134.162,109.316)
O4: (30.770,132.256,109.632)
O2: (34.391,134.114,111.594)
C6: (33.599,133.835,108.179)
C5: (32.418,133.211,108.212)
O3': (38.404,133.160,107.632)
N3: (32.591,133.208,110.565)
OP1: (33.181,134.569,104.652)
OP2: (35.264,135.080,103.230)
C2: (33.804,133.848,110.564)
C1': (35.596,134.859,109.250)
C3': (37.089,133.655,107.884)
O5': (35.438,134.094,105.528)
O4': (35.689,135.526,108.000)
C5': (36.503,135.015,105.790)
P: (34.553,134.211,104.213)
C4': (36.831,135.018,107.261)
C2': (36.800,133.920,109.356)
O2': (37.852,134.584,110.027)
N1: (34.300,134.162,109.316)
O4: (30.770,132.256,109.632)
O2: (34.391,134.114,111.594)
C6: (33.599,133.835,108.179)
C5: (32.418,133.211,108.212)
O3': (38.404,133.160,107.632)
Image (generated by PyMOL):