Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02029:02009
Extra
PDB:
ATOM 1 O3' G A2028 34.296 133.732 120.212 1.00 40.59 O
ATOM 2 P A A2029 33.169 134.842 119.990 1.00 43.67 P
ATOM 3 OP1 A A2029 33.686 136.121 120.540 1.00 42.28 O
ATOM 4 OP2 A A2029 31.876 134.291 120.475 1.00 43.21 O
ATOM 5 O5' A A2029 33.070 134.986 118.412 1.00 43.79 O
ATOM 6 C5' A A2029 34.097 135.648 117.670 1.00 43.47 C
ATOM 7 C4' A A2029 33.725 135.686 116.213 1.00 44.23 C
ATOM 8 O4' A A2029 33.700 134.337 115.677 1.00 43.26 O
ATOM 9 C3' A A2029 32.332 136.210 115.922 1.00 42.78 C
ATOM 10 O3' A A2029 32.297 137.627 115.946 1.00 43.73 O
ATOM 11 C2' A A2029 32.068 135.635 114.540 1.00 41.85 C
ATOM 12 O2' A A2029 32.741 136.347 113.525 1.00 41.00 O
ATOM 13 C1' A A2029 32.704 134.251 114.675 1.00 41.93 C
ATOM 14 N9 A A2029 31.733 133.242 115.077 1.00 41.24 N
ATOM 15 C8 A A2029 31.373 132.860 116.340 1.00 41.11 C
ATOM 16 N7 A A2029 30.437 131.947 116.366 1.00 41.77 N
ATOM 17 C5 A A2029 30.169 131.708 115.027 1.00 42.40 C
ATOM 18 C6 A A2029 29.263 130.856 114.382 1.00 43.55 C
ATOM 19 N6 A A2029 28.421 130.057 115.025 1.00 46.85 N
ATOM 20 N1 A A2029 29.245 130.856 113.032 1.00 44.13 N
ATOM 21 C2 A A2029 30.083 131.667 112.386 1.00 44.45 C
ATOM 22 N3 A A2029 30.977 132.519 112.880 1.00 44.76 N
ATOM 23 C4 A A2029 30.967 132.491 114.224 1.00 42.67 C
ATOM 24 P C A2030 31.049 138.378 116.614 1.00 45.07 P
ATOM 25 OP1 C A2030 31.576 139.501 117.430 1.00 45.67 O
ATOM 26 OP2 C A2030 30.194 137.343 117.256 1.00 45.41 O
ATOM 27 O5' C A2030 30.270 139.010 115.377 1.00 43.56 O
TER
ATOM 1 O3' A B2008 34.365 132.819 103.715 1.00 36.24 O
ATOM 2 P U B2009 34.432 134.325 104.268 1.00 38.65 P
ATOM 3 OP1 U B2009 33.067 134.665 104.736 1.00 38.89 O
ATOM 4 OP2 U B2009 35.097 135.179 103.250 1.00 39.15 O
ATOM 5 O5' U B2009 35.373 134.233 105.547 1.00 37.07 O
ATOM 6 C5' U B2009 36.384 135.220 105.802 1.00 36.26 C
ATOM 7 C4' U B2009 36.738 135.235 107.272 1.00 38.06 C
ATOM 8 O4' U B2009 35.618 135.751 108.044 1.00 36.87 O
ATOM 9 C3' U B2009 37.016 133.875 107.894 1.00 37.78 C
ATOM 10 O3' U B2009 38.322 133.382 107.607 1.00 39.56 O
ATOM 11 C2' U B2009 36.749 134.134 109.371 1.00 36.37 C
ATOM 12 O2' U B2009 37.802 134.788 110.058 1.00 36.30 O
ATOM 13 C1' U B2009 35.542 135.070 109.286 1.00 35.97 C
ATOM 14 N1 U B2009 34.263 134.346 109.342 1.00 35.95 N
ATOM 15 C2 U B2009 33.747 134.064 110.586 1.00 37.08 C
ATOM 16 O2 U B2009 34.317 134.365 111.619 1.00 41.61 O
ATOM 17 N3 U B2009 32.540 133.413 110.584 1.00 36.22 N
ATOM 18 C4 U B2009 31.815 133.015 109.488 1.00 36.04 C
ATOM 19 O4 U B2009 30.724 132.461 109.649 1.00 34.94 O
ATOM 20 C5 U B2009 32.424 133.324 108.235 1.00 36.23 C
ATOM 21 C6 U B2009 33.597 133.963 108.205 1.00 35.71 C
ATOM 22 P U B2010 38.487 132.036 106.737 1.00 42.68 P
ATOM 23 OP1 U B2010 39.279 132.383 105.535 1.00 43.13 O
ATOM 24 OP2 U B2010 37.160 131.421 106.574 1.00 44.08 O
ATOM 25 O5' U B2010 39.336 131.056 107.659 1.00 41.78 O
TER
ATOM 2 P A A2029 33.169 134.842 119.990 1.00 43.67 P
ATOM 3 OP1 A A2029 33.686 136.121 120.540 1.00 42.28 O
ATOM 4 OP2 A A2029 31.876 134.291 120.475 1.00 43.21 O
ATOM 5 O5' A A2029 33.070 134.986 118.412 1.00 43.79 O
ATOM 6 C5' A A2029 34.097 135.648 117.670 1.00 43.47 C
ATOM 7 C4' A A2029 33.725 135.686 116.213 1.00 44.23 C
ATOM 8 O4' A A2029 33.700 134.337 115.677 1.00 43.26 O
ATOM 9 C3' A A2029 32.332 136.210 115.922 1.00 42.78 C
ATOM 10 O3' A A2029 32.297 137.627 115.946 1.00 43.73 O
ATOM 11 C2' A A2029 32.068 135.635 114.540 1.00 41.85 C
ATOM 12 O2' A A2029 32.741 136.347 113.525 1.00 41.00 O
ATOM 13 C1' A A2029 32.704 134.251 114.675 1.00 41.93 C
ATOM 14 N9 A A2029 31.733 133.242 115.077 1.00 41.24 N
ATOM 15 C8 A A2029 31.373 132.860 116.340 1.00 41.11 C
ATOM 16 N7 A A2029 30.437 131.947 116.366 1.00 41.77 N
ATOM 17 C5 A A2029 30.169 131.708 115.027 1.00 42.40 C
ATOM 18 C6 A A2029 29.263 130.856 114.382 1.00 43.55 C
ATOM 19 N6 A A2029 28.421 130.057 115.025 1.00 46.85 N
ATOM 20 N1 A A2029 29.245 130.856 113.032 1.00 44.13 N
ATOM 21 C2 A A2029 30.083 131.667 112.386 1.00 44.45 C
ATOM 22 N3 A A2029 30.977 132.519 112.880 1.00 44.76 N
ATOM 23 C4 A A2029 30.967 132.491 114.224 1.00 42.67 C
ATOM 24 P C A2030 31.049 138.378 116.614 1.00 45.07 P
ATOM 25 OP1 C A2030 31.576 139.501 117.430 1.00 45.67 O
ATOM 26 OP2 C A2030 30.194 137.343 117.256 1.00 45.41 O
ATOM 27 O5' C A2030 30.270 139.010 115.377 1.00 43.56 O
TER
ATOM 1 O3' A B2008 34.365 132.819 103.715 1.00 36.24 O
ATOM 2 P U B2009 34.432 134.325 104.268 1.00 38.65 P
ATOM 3 OP1 U B2009 33.067 134.665 104.736 1.00 38.89 O
ATOM 4 OP2 U B2009 35.097 135.179 103.250 1.00 39.15 O
ATOM 5 O5' U B2009 35.373 134.233 105.547 1.00 37.07 O
ATOM 6 C5' U B2009 36.384 135.220 105.802 1.00 36.26 C
ATOM 7 C4' U B2009 36.738 135.235 107.272 1.00 38.06 C
ATOM 8 O4' U B2009 35.618 135.751 108.044 1.00 36.87 O
ATOM 9 C3' U B2009 37.016 133.875 107.894 1.00 37.78 C
ATOM 10 O3' U B2009 38.322 133.382 107.607 1.00 39.56 O
ATOM 11 C2' U B2009 36.749 134.134 109.371 1.00 36.37 C
ATOM 12 O2' U B2009 37.802 134.788 110.058 1.00 36.30 O
ATOM 13 C1' U B2009 35.542 135.070 109.286 1.00 35.97 C
ATOM 14 N1 U B2009 34.263 134.346 109.342 1.00 35.95 N
ATOM 15 C2 U B2009 33.747 134.064 110.586 1.00 37.08 C
ATOM 16 O2 U B2009 34.317 134.365 111.619 1.00 41.61 O
ATOM 17 N3 U B2009 32.540 133.413 110.584 1.00 36.22 N
ATOM 18 C4 U B2009 31.815 133.015 109.488 1.00 36.04 C
ATOM 19 O4 U B2009 30.724 132.461 109.649 1.00 34.94 O
ATOM 20 C5 U B2009 32.424 133.324 108.235 1.00 36.23 C
ATOM 21 C6 U B2009 33.597 133.963 108.205 1.00 35.71 C
ATOM 22 P U B2010 38.487 132.036 106.737 1.00 42.68 P
ATOM 23 OP1 U B2010 39.279 132.383 105.535 1.00 43.13 O
ATOM 24 OP2 U B2010 37.160 131.421 106.574 1.00 44.08 O
ATOM 25 O5' U B2010 39.336 131.056 107.659 1.00 41.78 O
TER
Atoms:
OP1: (33.686,136.121,120.540)
OP2: (31.876,134.291,120.475)
C3': (32.332,136.210,115.922)
C1': (32.704,134.251,114.675)
C5': (34.097,135.648,117.670)
O4': (33.700,134.337,115.677)
C8: (31.373,132.860,116.340)
O2': (32.741,136.347,113.525)
C6: (29.263,130.856,114.382)
C5: (30.169,131.708,115.027)
C4: (30.967,132.491,114.224)
P: (33.169,134.842,119.990)
C4': (33.725,135.686,116.213)
C2': (32.068,135.635,114.540)
C2: (30.083,131.667,112.386)
N1: (29.245,130.856,113.032)
N3: (30.977,132.519,112.880)
N6: (28.421,130.057,115.025)
N7: (30.437,131.947,116.366)
N9: (31.733,133.242,115.077)
O5': (33.070,134.986,118.412)
O3': (32.297,137.627,115.946)
OP2: (31.876,134.291,120.475)
C3': (32.332,136.210,115.922)
C1': (32.704,134.251,114.675)
C5': (34.097,135.648,117.670)
O4': (33.700,134.337,115.677)
C8: (31.373,132.860,116.340)
O2': (32.741,136.347,113.525)
C6: (29.263,130.856,114.382)
C5: (30.169,131.708,115.027)
C4: (30.967,132.491,114.224)
P: (33.169,134.842,119.990)
C4': (33.725,135.686,116.213)
C2': (32.068,135.635,114.540)
C2: (30.083,131.667,112.386)
N1: (29.245,130.856,113.032)
N3: (30.977,132.519,112.880)
N6: (28.421,130.057,115.025)
N7: (30.437,131.947,116.366)
N9: (31.733,133.242,115.077)
O5': (33.070,134.986,118.412)
O3': (32.297,137.627,115.946)
C4: (31.815,133.015,109.488)
N3: (32.540,133.413,110.584)
OP1: (33.067,134.665,104.736)
OP2: (35.097,135.179,103.250)
C2: (33.747,134.064,110.586)
C1': (35.542,135.070,109.286)
C3': (37.016,133.875,107.894)
O5': (35.373,134.233,105.547)
O4': (35.618,135.751,108.044)
C5': (36.384,135.220,105.802)
P: (34.432,134.325,104.268)
C4': (36.738,135.235,107.272)
C2': (36.749,134.134,109.371)
O2': (37.802,134.788,110.058)
N1: (34.263,134.346,109.342)
O4: (30.724,132.461,109.649)
O2: (34.317,134.365,111.619)
C6: (33.597,133.963,108.205)
C5: (32.424,133.324,108.235)
O3': (38.322,133.382,107.607)
N3: (32.540,133.413,110.584)
OP1: (33.067,134.665,104.736)
OP2: (35.097,135.179,103.250)
C2: (33.747,134.064,110.586)
C1': (35.542,135.070,109.286)
C3': (37.016,133.875,107.894)
O5': (35.373,134.233,105.547)
O4': (35.618,135.751,108.044)
C5': (36.384,135.220,105.802)
P: (34.432,134.325,104.268)
C4': (36.738,135.235,107.272)
C2': (36.749,134.134,109.371)
O2': (37.802,134.788,110.058)
N1: (34.263,134.346,109.342)
O4: (30.724,132.461,109.649)
O2: (34.317,134.365,111.619)
C6: (33.597,133.963,108.205)
C5: (32.424,133.324,108.235)
O3': (38.322,133.382,107.607)
Image (generated by PyMOL):