Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02001:0827
Extra
PDB:
ATOM 1 O3' A A2000 49.126 147.532 83.304 1.00 35.68 O
ATOM 2 P A A2001 48.467 146.096 83.559 1.00 35.67 P
ATOM 3 OP1 A A2001 48.185 145.492 82.226 1.00 33.72 O
ATOM 4 OP2 A A2001 47.364 146.273 84.533 1.00 35.22 O
ATOM 5 O5' A A2001 49.637 145.284 84.260 1.00 33.25 O
ATOM 6 C5' A A2001 50.932 145.247 83.662 1.00 32.28 C
ATOM 7 C4' A A2001 51.939 144.742 84.646 1.00 30.43 C
ATOM 8 O4' A A2001 52.010 145.645 85.772 1.00 28.54 O
ATOM 9 C3' A A2001 51.625 143.397 85.264 1.00 29.65 C
ATOM 10 O3' A A2001 52.033 142.360 84.380 1.00 31.14 O
ATOM 11 C2' A A2001 52.464 143.448 86.530 1.00 29.19 C
ATOM 12 O2' A A2001 53.831 143.227 86.253 1.00 28.03 O
ATOM 13 C1' A A2001 52.283 144.910 86.947 1.00 28.90 C
ATOM 14 N9 A A2001 51.176 145.135 87.874 1.00 30.67 N
ATOM 15 C8 A A2001 49.914 145.563 87.557 1.00 32.22 C
ATOM 16 N7 A A2001 49.128 145.705 88.595 1.00 32.70 N
ATOM 17 C5 A A2001 49.925 145.341 89.668 1.00 31.19 C
ATOM 18 C6 A A2001 49.679 145.286 91.043 1.00 32.21 C
ATOM 19 N6 A A2001 48.511 145.624 91.604 1.00 31.90 N
ATOM 20 N1 A A2001 50.682 144.873 91.838 1.00 31.43 N
ATOM 21 C2 A A2001 51.847 144.551 91.281 1.00 30.47 C
ATOM 22 N3 A A2001 52.202 144.569 90.006 1.00 30.60 N
ATOM 23 C4 A A2001 51.184 144.977 89.239 1.00 30.48 C
ATOM 24 P C A2002 51.452 140.872 84.558 1.00 33.23 P
ATOM 25 OP1 C A2002 52.109 140.048 83.509 1.00 31.20 O
ATOM 26 OP2 C A2002 49.970 140.930 84.627 1.00 33.60 O
ATOM 27 O5' C A2002 51.993 140.391 85.976 1.00 31.21 O
TER
ATOM 1 O3' C B 826 63.239 143.787 91.005 1.00 33.16 O
ATOM 2 P U B 827 61.693 144.132 91.243 1.00 34.99 P
ATOM 3 OP1 U B 827 61.555 144.898 92.501 1.00 33.48 O
ATOM 4 OP2 U B 827 60.915 142.882 91.056 1.00 36.20 O
ATOM 5 O5' U B 827 61.341 145.102 90.031 1.00 34.35 O
ATOM 6 C5' U B 827 61.672 144.744 88.675 1.00 33.28 C
ATOM 7 C4' U B 827 60.464 144.900 87.793 1.00 33.94 C
ATOM 8 O4' U B 827 59.451 143.966 88.221 1.00 35.94 O
ATOM 9 C3' U B 827 59.773 146.246 87.892 1.00 33.59 C
ATOM 10 O3' U B 827 60.420 147.169 87.033 1.00 31.34 O
ATOM 11 C2' U B 827 58.350 145.937 87.437 1.00 34.17 C
ATOM 12 O2' U B 827 58.207 145.959 86.039 1.00 35.63 O
ATOM 13 C1' U B 827 58.172 144.493 87.917 1.00 35.80 C
ATOM 14 N1 U B 827 57.276 144.263 89.062 1.00 36.94 N
ATOM 15 C2 U B 827 55.945 144.626 88.932 1.00 37.67 C
ATOM 16 O2 U B 827 55.502 145.186 87.948 1.00 39.36 O
ATOM 17 N3 U B 827 55.153 144.319 90.006 1.00 37.39 N
ATOM 18 C4 U B 827 55.547 143.724 91.180 1.00 39.13 C
ATOM 19 O4 U B 827 54.714 143.514 92.066 1.00 40.38 O
ATOM 20 C5 U B 827 56.941 143.411 91.250 1.00 39.44 C
ATOM 21 C6 U B 827 57.735 143.684 90.218 1.00 36.85 C
ATOM 22 P A B 828 59.999 148.712 87.057 1.00 31.74 P
ATOM 23 OP1 A B 828 58.923 148.883 88.050 1.00 31.95 O
ATOM 24 OP2 A B 828 59.777 149.126 85.651 1.00 31.90 O
ATOM 25 O5' A B 828 61.299 149.461 87.586 1.00 31.29 O
TER
ATOM 2 P A A2001 48.467 146.096 83.559 1.00 35.67 P
ATOM 3 OP1 A A2001 48.185 145.492 82.226 1.00 33.72 O
ATOM 4 OP2 A A2001 47.364 146.273 84.533 1.00 35.22 O
ATOM 5 O5' A A2001 49.637 145.284 84.260 1.00 33.25 O
ATOM 6 C5' A A2001 50.932 145.247 83.662 1.00 32.28 C
ATOM 7 C4' A A2001 51.939 144.742 84.646 1.00 30.43 C
ATOM 8 O4' A A2001 52.010 145.645 85.772 1.00 28.54 O
ATOM 9 C3' A A2001 51.625 143.397 85.264 1.00 29.65 C
ATOM 10 O3' A A2001 52.033 142.360 84.380 1.00 31.14 O
ATOM 11 C2' A A2001 52.464 143.448 86.530 1.00 29.19 C
ATOM 12 O2' A A2001 53.831 143.227 86.253 1.00 28.03 O
ATOM 13 C1' A A2001 52.283 144.910 86.947 1.00 28.90 C
ATOM 14 N9 A A2001 51.176 145.135 87.874 1.00 30.67 N
ATOM 15 C8 A A2001 49.914 145.563 87.557 1.00 32.22 C
ATOM 16 N7 A A2001 49.128 145.705 88.595 1.00 32.70 N
ATOM 17 C5 A A2001 49.925 145.341 89.668 1.00 31.19 C
ATOM 18 C6 A A2001 49.679 145.286 91.043 1.00 32.21 C
ATOM 19 N6 A A2001 48.511 145.624 91.604 1.00 31.90 N
ATOM 20 N1 A A2001 50.682 144.873 91.838 1.00 31.43 N
ATOM 21 C2 A A2001 51.847 144.551 91.281 1.00 30.47 C
ATOM 22 N3 A A2001 52.202 144.569 90.006 1.00 30.60 N
ATOM 23 C4 A A2001 51.184 144.977 89.239 1.00 30.48 C
ATOM 24 P C A2002 51.452 140.872 84.558 1.00 33.23 P
ATOM 25 OP1 C A2002 52.109 140.048 83.509 1.00 31.20 O
ATOM 26 OP2 C A2002 49.970 140.930 84.627 1.00 33.60 O
ATOM 27 O5' C A2002 51.993 140.391 85.976 1.00 31.21 O
TER
ATOM 1 O3' C B 826 63.239 143.787 91.005 1.00 33.16 O
ATOM 2 P U B 827 61.693 144.132 91.243 1.00 34.99 P
ATOM 3 OP1 U B 827 61.555 144.898 92.501 1.00 33.48 O
ATOM 4 OP2 U B 827 60.915 142.882 91.056 1.00 36.20 O
ATOM 5 O5' U B 827 61.341 145.102 90.031 1.00 34.35 O
ATOM 6 C5' U B 827 61.672 144.744 88.675 1.00 33.28 C
ATOM 7 C4' U B 827 60.464 144.900 87.793 1.00 33.94 C
ATOM 8 O4' U B 827 59.451 143.966 88.221 1.00 35.94 O
ATOM 9 C3' U B 827 59.773 146.246 87.892 1.00 33.59 C
ATOM 10 O3' U B 827 60.420 147.169 87.033 1.00 31.34 O
ATOM 11 C2' U B 827 58.350 145.937 87.437 1.00 34.17 C
ATOM 12 O2' U B 827 58.207 145.959 86.039 1.00 35.63 O
ATOM 13 C1' U B 827 58.172 144.493 87.917 1.00 35.80 C
ATOM 14 N1 U B 827 57.276 144.263 89.062 1.00 36.94 N
ATOM 15 C2 U B 827 55.945 144.626 88.932 1.00 37.67 C
ATOM 16 O2 U B 827 55.502 145.186 87.948 1.00 39.36 O
ATOM 17 N3 U B 827 55.153 144.319 90.006 1.00 37.39 N
ATOM 18 C4 U B 827 55.547 143.724 91.180 1.00 39.13 C
ATOM 19 O4 U B 827 54.714 143.514 92.066 1.00 40.38 O
ATOM 20 C5 U B 827 56.941 143.411 91.250 1.00 39.44 C
ATOM 21 C6 U B 827 57.735 143.684 90.218 1.00 36.85 C
ATOM 22 P A B 828 59.999 148.712 87.057 1.00 31.74 P
ATOM 23 OP1 A B 828 58.923 148.883 88.050 1.00 31.95 O
ATOM 24 OP2 A B 828 59.777 149.126 85.651 1.00 31.90 O
ATOM 25 O5' A B 828 61.299 149.461 87.586 1.00 31.29 O
TER
Atoms:
OP1: (48.185,145.492,82.226)
OP2: (47.364,146.273,84.533)
C3': (51.625,143.397,85.264)
C1': (52.283,144.910,86.947)
C5': (50.932,145.247,83.662)
O4': (52.010,145.645,85.772)
C8: (49.914,145.563,87.557)
O2': (53.831,143.227,86.253)
C6: (49.679,145.286,91.043)
C5: (49.925,145.341,89.668)
C4: (51.184,144.977,89.239)
P: (48.467,146.096,83.559)
C4': (51.939,144.742,84.646)
C2': (52.464,143.448,86.530)
C2: (51.847,144.551,91.281)
N1: (50.682,144.873,91.838)
N3: (52.202,144.569,90.006)
N6: (48.511,145.624,91.604)
N7: (49.128,145.705,88.595)
N9: (51.176,145.135,87.874)
O5': (49.637,145.284,84.260)
O3': (52.033,142.360,84.380)
OP2: (47.364,146.273,84.533)
C3': (51.625,143.397,85.264)
C1': (52.283,144.910,86.947)
C5': (50.932,145.247,83.662)
O4': (52.010,145.645,85.772)
C8: (49.914,145.563,87.557)
O2': (53.831,143.227,86.253)
C6: (49.679,145.286,91.043)
C5: (49.925,145.341,89.668)
C4: (51.184,144.977,89.239)
P: (48.467,146.096,83.559)
C4': (51.939,144.742,84.646)
C2': (52.464,143.448,86.530)
C2: (51.847,144.551,91.281)
N1: (50.682,144.873,91.838)
N3: (52.202,144.569,90.006)
N6: (48.511,145.624,91.604)
N7: (49.128,145.705,88.595)
N9: (51.176,145.135,87.874)
O5': (49.637,145.284,84.260)
O3': (52.033,142.360,84.380)
C4: (55.547,143.724,91.180)
N3: (55.153,144.319,90.006)
OP1: (61.555,144.898,92.501)
OP2: (60.915,142.882,91.056)
C2: (55.945,144.626,88.932)
C1': (58.172,144.493,87.917)
C3': (59.773,146.246,87.892)
O5': (61.341,145.102,90.031)
O4': (59.451,143.966,88.221)
C5': (61.672,144.744,88.675)
P: (61.693,144.132,91.243)
C4': (60.464,144.900,87.793)
C2': (58.350,145.937,87.437)
O2': (58.207,145.959,86.039)
N1: (57.276,144.263,89.062)
O4: (54.714,143.514,92.066)
O2: (55.502,145.186,87.948)
C6: (57.735,143.684,90.218)
C5: (56.941,143.411,91.250)
O3': (60.420,147.169,87.033)
N3: (55.153,144.319,90.006)
OP1: (61.555,144.898,92.501)
OP2: (60.915,142.882,91.056)
C2: (55.945,144.626,88.932)
C1': (58.172,144.493,87.917)
C3': (59.773,146.246,87.892)
O5': (61.341,145.102,90.031)
O4': (59.451,143.966,88.221)
C5': (61.672,144.744,88.675)
P: (61.693,144.132,91.243)
C4': (60.464,144.900,87.793)
C2': (58.350,145.937,87.437)
O2': (58.207,145.959,86.039)
N1: (57.276,144.263,89.062)
O4: (54.714,143.514,92.066)
O2: (55.502,145.186,87.948)
C6: (57.735,143.684,90.218)
C5: (56.941,143.411,91.250)
O3': (60.420,147.169,87.033)
Image (generated by PyMOL):