Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0317:0334
Extra
PDB:
ATOM 1 O3' U A 316 18.905 124.575 21.494 1.00 44.79 O
ATOM 2 P A A 317 18.481 124.506 23.045 1.00 45.57 P
ATOM 3 OP1 A A 317 19.358 123.487 23.669 1.00 45.17 O
ATOM 4 OP2 A A 317 17.005 124.345 23.112 1.00 45.77 O
ATOM 5 O5' A A 317 18.823 125.946 23.647 1.00 44.67 O
ATOM 6 C5' A A 317 19.967 126.152 24.512 1.00 42.99 C
ATOM 7 C4' A A 317 19.965 127.555 25.084 1.00 42.09 C
ATOM 8 O4' A A 317 19.873 128.505 23.985 1.00 43.39 O
ATOM 9 C3' A A 317 18.818 127.904 26.033 1.00 42.53 C
ATOM 10 O3' A A 317 19.223 128.926 26.956 1.00 42.77 O
ATOM 11 C2' A A 317 17.817 128.554 25.085 1.00 43.33 C
ATOM 12 O2' A A 317 16.908 129.419 25.733 1.00 43.83 O
ATOM 13 C1' A A 317 18.759 129.346 24.186 1.00 43.96 C
ATOM 14 N9 A A 317 18.220 129.742 22.886 1.00 46.35 N
ATOM 15 C8 A A 317 17.460 129.016 22.002 1.00 47.70 C
ATOM 16 N7 A A 317 17.116 129.683 20.927 1.00 48.19 N
ATOM 17 C5 A A 317 17.693 130.932 21.113 1.00 48.81 C
ATOM 18 C6 A A 317 17.693 132.100 20.331 1.00 48.12 C
ATOM 19 N6 A A 317 17.058 132.212 19.165 1.00 48.59 N
ATOM 20 N1 A A 317 18.372 133.167 20.799 1.00 48.18 N
ATOM 21 C2 A A 317 19.001 133.062 21.975 1.00 49.89 C
ATOM 22 N3 A A 317 19.069 132.024 22.806 1.00 49.97 N
ATOM 23 C4 A A 317 18.384 130.978 22.310 1.00 48.94 C
ATOM 24 P C A 318 19.995 128.552 28.320 1.00 43.10 P
ATOM 25 OP1 C A 318 19.949 129.782 29.149 1.00 41.69 O
ATOM 26 OP2 C A 318 21.308 127.951 27.961 1.00 41.57 O
ATOM 27 O5' C A 318 19.105 127.443 29.048 1.00 42.76 O
TER
ATOM 1 O3' G B 333 27.649 135.087 26.564 1.00 41.96 O
ATOM 2 P U B 334 27.721 133.893 25.493 1.00 43.53 P
ATOM 3 OP1 U B 334 29.048 133.245 25.620 1.00 44.30 O
ATOM 4 OP2 U B 334 27.296 134.411 24.172 1.00 43.86 O
ATOM 5 O5' U B 334 26.612 132.865 25.995 1.00 45.50 O
ATOM 6 C5' U B 334 26.873 131.953 27.083 1.00 44.30 C
ATOM 7 C4' U B 334 25.713 131.004 27.250 1.00 44.32 C
ATOM 8 O4' U B 334 24.533 131.763 27.607 1.00 44.54 O
ATOM 9 C3' U B 334 25.315 130.243 25.997 1.00 44.11 C
ATOM 10 O3' U B 334 26.121 129.077 25.831 1.00 44.52 O
ATOM 11 C2' U B 334 23.849 129.925 26.266 1.00 45.72 C
ATOM 12 O2' U B 334 23.655 128.840 27.147 1.00 44.79 O
ATOM 13 C1' U B 334 23.396 131.196 26.986 1.00 46.98 C
ATOM 14 N1 U B 334 22.787 132.204 26.103 1.00 50.40 N
ATOM 15 C2 U B 334 21.476 131.998 25.704 1.00 52.48 C
ATOM 16 O2 U B 334 20.825 131.022 26.043 1.00 54.32 O
ATOM 17 N3 U B 334 20.954 132.975 24.890 1.00 52.82 N
ATOM 18 C4 U B 334 21.592 134.108 24.442 1.00 52.82 C
ATOM 19 O4 U B 334 20.980 134.902 23.726 1.00 52.47 O
ATOM 20 C5 U B 334 22.946 134.250 24.892 1.00 52.91 C
ATOM 21 C6 U B 334 23.483 133.318 25.687 1.00 51.58 C
ATOM 22 P A B 335 26.640 128.660 24.366 1.00 45.56 P
ATOM 23 OP1 A B 335 27.647 127.572 24.498 1.00 42.87 O
ATOM 24 OP2 A B 335 27.004 129.902 23.647 1.00 47.07 O
ATOM 25 O5' A B 335 25.343 128.059 23.663 1.00 46.90 O
TER
ATOM 2 P A A 317 18.481 124.506 23.045 1.00 45.57 P
ATOM 3 OP1 A A 317 19.358 123.487 23.669 1.00 45.17 O
ATOM 4 OP2 A A 317 17.005 124.345 23.112 1.00 45.77 O
ATOM 5 O5' A A 317 18.823 125.946 23.647 1.00 44.67 O
ATOM 6 C5' A A 317 19.967 126.152 24.512 1.00 42.99 C
ATOM 7 C4' A A 317 19.965 127.555 25.084 1.00 42.09 C
ATOM 8 O4' A A 317 19.873 128.505 23.985 1.00 43.39 O
ATOM 9 C3' A A 317 18.818 127.904 26.033 1.00 42.53 C
ATOM 10 O3' A A 317 19.223 128.926 26.956 1.00 42.77 O
ATOM 11 C2' A A 317 17.817 128.554 25.085 1.00 43.33 C
ATOM 12 O2' A A 317 16.908 129.419 25.733 1.00 43.83 O
ATOM 13 C1' A A 317 18.759 129.346 24.186 1.00 43.96 C
ATOM 14 N9 A A 317 18.220 129.742 22.886 1.00 46.35 N
ATOM 15 C8 A A 317 17.460 129.016 22.002 1.00 47.70 C
ATOM 16 N7 A A 317 17.116 129.683 20.927 1.00 48.19 N
ATOM 17 C5 A A 317 17.693 130.932 21.113 1.00 48.81 C
ATOM 18 C6 A A 317 17.693 132.100 20.331 1.00 48.12 C
ATOM 19 N6 A A 317 17.058 132.212 19.165 1.00 48.59 N
ATOM 20 N1 A A 317 18.372 133.167 20.799 1.00 48.18 N
ATOM 21 C2 A A 317 19.001 133.062 21.975 1.00 49.89 C
ATOM 22 N3 A A 317 19.069 132.024 22.806 1.00 49.97 N
ATOM 23 C4 A A 317 18.384 130.978 22.310 1.00 48.94 C
ATOM 24 P C A 318 19.995 128.552 28.320 1.00 43.10 P
ATOM 25 OP1 C A 318 19.949 129.782 29.149 1.00 41.69 O
ATOM 26 OP2 C A 318 21.308 127.951 27.961 1.00 41.57 O
ATOM 27 O5' C A 318 19.105 127.443 29.048 1.00 42.76 O
TER
ATOM 1 O3' G B 333 27.649 135.087 26.564 1.00 41.96 O
ATOM 2 P U B 334 27.721 133.893 25.493 1.00 43.53 P
ATOM 3 OP1 U B 334 29.048 133.245 25.620 1.00 44.30 O
ATOM 4 OP2 U B 334 27.296 134.411 24.172 1.00 43.86 O
ATOM 5 O5' U B 334 26.612 132.865 25.995 1.00 45.50 O
ATOM 6 C5' U B 334 26.873 131.953 27.083 1.00 44.30 C
ATOM 7 C4' U B 334 25.713 131.004 27.250 1.00 44.32 C
ATOM 8 O4' U B 334 24.533 131.763 27.607 1.00 44.54 O
ATOM 9 C3' U B 334 25.315 130.243 25.997 1.00 44.11 C
ATOM 10 O3' U B 334 26.121 129.077 25.831 1.00 44.52 O
ATOM 11 C2' U B 334 23.849 129.925 26.266 1.00 45.72 C
ATOM 12 O2' U B 334 23.655 128.840 27.147 1.00 44.79 O
ATOM 13 C1' U B 334 23.396 131.196 26.986 1.00 46.98 C
ATOM 14 N1 U B 334 22.787 132.204 26.103 1.00 50.40 N
ATOM 15 C2 U B 334 21.476 131.998 25.704 1.00 52.48 C
ATOM 16 O2 U B 334 20.825 131.022 26.043 1.00 54.32 O
ATOM 17 N3 U B 334 20.954 132.975 24.890 1.00 52.82 N
ATOM 18 C4 U B 334 21.592 134.108 24.442 1.00 52.82 C
ATOM 19 O4 U B 334 20.980 134.902 23.726 1.00 52.47 O
ATOM 20 C5 U B 334 22.946 134.250 24.892 1.00 52.91 C
ATOM 21 C6 U B 334 23.483 133.318 25.687 1.00 51.58 C
ATOM 22 P A B 335 26.640 128.660 24.366 1.00 45.56 P
ATOM 23 OP1 A B 335 27.647 127.572 24.498 1.00 42.87 O
ATOM 24 OP2 A B 335 27.004 129.902 23.647 1.00 47.07 O
ATOM 25 O5' A B 335 25.343 128.059 23.663 1.00 46.90 O
TER
Atoms:
OP1: (19.358,123.487,23.669)
OP2: (17.005,124.345,23.112)
C3': (18.818,127.904,26.033)
C1': (18.759,129.346,24.186)
C5': (19.967,126.152,24.512)
O4': (19.873,128.505,23.985)
C8: (17.460,129.016,22.002)
O2': (16.908,129.419,25.733)
C6: (17.693,132.100,20.331)
C5: (17.693,130.932,21.113)
C4: (18.384,130.978,22.310)
P: (18.481,124.506,23.045)
C4': (19.965,127.555,25.084)
C2': (17.817,128.554,25.085)
C2: (19.001,133.062,21.975)
N1: (18.372,133.167,20.799)
N3: (19.069,132.024,22.806)
N6: (17.058,132.212,19.165)
N7: (17.116,129.683,20.927)
N9: (18.220,129.742,22.886)
O5': (18.823,125.946,23.647)
O3': (19.223,128.926,26.956)
OP2: (17.005,124.345,23.112)
C3': (18.818,127.904,26.033)
C1': (18.759,129.346,24.186)
C5': (19.967,126.152,24.512)
O4': (19.873,128.505,23.985)
C8: (17.460,129.016,22.002)
O2': (16.908,129.419,25.733)
C6: (17.693,132.100,20.331)
C5: (17.693,130.932,21.113)
C4: (18.384,130.978,22.310)
P: (18.481,124.506,23.045)
C4': (19.965,127.555,25.084)
C2': (17.817,128.554,25.085)
C2: (19.001,133.062,21.975)
N1: (18.372,133.167,20.799)
N3: (19.069,132.024,22.806)
N6: (17.058,132.212,19.165)
N7: (17.116,129.683,20.927)
N9: (18.220,129.742,22.886)
O5': (18.823,125.946,23.647)
O3': (19.223,128.926,26.956)
C4: (21.592,134.108,24.442)
N3: (20.954,132.975,24.890)
OP1: (29.048,133.245,25.620)
OP2: (27.296,134.411,24.172)
C2: (21.476,131.998,25.704)
C1': (23.396,131.196,26.986)
C3': (25.315,130.243,25.997)
O5': (26.612,132.865,25.995)
O4': (24.533,131.763,27.607)
C5': (26.873,131.953,27.083)
P: (27.721,133.893,25.493)
C4': (25.713,131.004,27.250)
C2': (23.849,129.925,26.266)
O2': (23.655,128.840,27.147)
N1: (22.787,132.204,26.103)
O4: (20.980,134.902,23.726)
O2: (20.825,131.022,26.043)
C6: (23.483,133.318,25.687)
C5: (22.946,134.250,24.892)
O3': (26.121,129.077,25.831)
N3: (20.954,132.975,24.890)
OP1: (29.048,133.245,25.620)
OP2: (27.296,134.411,24.172)
C2: (21.476,131.998,25.704)
C1': (23.396,131.196,26.986)
C3': (25.315,130.243,25.997)
O5': (26.612,132.865,25.995)
O4': (24.533,131.763,27.607)
C5': (26.873,131.953,27.083)
P: (27.721,133.893,25.493)
C4': (25.713,131.004,27.250)
C2': (23.849,129.925,26.266)
O2': (23.655,128.840,27.147)
N1: (22.787,132.204,26.103)
O4: (20.980,134.902,23.726)
O2: (20.825,131.022,26.043)
C6: (23.483,133.318,25.687)
C5: (22.946,134.250,24.892)
O3': (26.121,129.077,25.831)
Image (generated by PyMOL):