ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2EEU:A61:A34

Extra

PDB:
ATOM 1 O3' U A 60 5.545 13.660 14.397 1.00 33.76 O
ATOM 2 P A A 61 4.135 12.882 14.365 1.00 34.59 P
ATOM 3 OP1 A A 61 3.136 13.723 15.068 1.00 35.84 O
ATOM 4 OP2 A A 61 4.346 11.481 14.807 1.00 34.53 O
ATOM 5 O5' A A 61 3.745 12.860 12.819 1.00 33.35 O
ATOM 6 C5' A A 61 3.504 14.078 12.121 1.00 32.33 C
ATOM 7 C4' A A 61 3.188 13.806 10.670 1.00 31.86 C
ATOM 8 O4' A A 61 4.386 13.380 9.966 1.00 31.41 O
ATOM 9 C3' A A 61 2.188 12.697 10.397 1.00 32.47 C
ATOM 10 O3' A A 61 0.860 13.194 10.537 1.00 34.71 O
ATOM 11 C2' A A 61 2.504 12.367 8.944 1.00 31.83 C
ATOM 12 O2' A A 61 1.970 13.331 8.057 1.00 29.13 O
ATOM 13 C1' A A 61 4.033 12.457 8.944 1.00 30.30 C
ATOM 14 N9 A A 61 4.687 11.182 9.239 1.00 30.02 N
ATOM 15 C8 A A 61 5.060 10.703 10.471 1.00 30.31 C
ATOM 16 N7 A A 61 5.612 9.514 10.433 1.00 29.01 N
ATOM 17 C5 A A 61 5.608 9.191 9.084 1.00 28.49 C
ATOM 18 C6 A A 61 6.049 8.056 8.390 1.00 27.99 C
ATOM 19 N6 A A 61 6.601 6.998 8.990 1.00 25.80 N
ATOM 20 N1 A A 61 5.899 8.042 7.047 1.00 28.08 N
ATOM 21 C2 A A 61 5.339 9.106 6.454 1.00 27.90 C
ATOM 22 N3 A A 61 4.884 10.233 7.002 1.00 28.62 N
ATOM 23 C4 A A 61 5.048 10.211 8.335 1.00 28.98 C
ATOM 24 P U A 62 -0.289 12.248 11.144 1.00 36.55 P
ATOM 25 OP1 U A 62 -1.484 13.091 11.395 1.00 39.35 O
ATOM 26 OP2 U A 62 0.290 11.453 12.256 1.00 38.49 O
ATOM 27 O5' U A 62 -0.630 11.253 9.952 1.00 36.59 O
TER

ATOM 1 O3' U B 33 2.916 16.473 -1.809 1.00 34.00 O
ATOM 2 P U B 34 4.147 17.250 -1.134 1.00 36.94 P
ATOM 3 OP1 U B 34 3.849 18.703 -1.246 1.00 34.78 O
ATOM 4 OP2 U B 34 5.413 16.710 -1.692 1.00 35.20 O
ATOM 5 O5' U B 34 4.076 16.843 0.404 1.00 35.63 O
ATOM 6 C5' U B 34 2.993 17.266 1.228 1.00 35.41 C
ATOM 7 C4' U B 34 3.388 17.187 2.681 1.00 35.09 C
ATOM 8 O4' U B 34 3.327 15.804 3.121 1.00 35.35 O
ATOM 9 C3' U B 34 4.799 17.678 2.995 1.00 36.35 C
ATOM 10 O3' U B 34 4.782 18.482 4.168 1.00 37.88 O
ATOM 11 C2' U B 34 5.584 16.385 3.219 1.00 35.25 C
ATOM 12 O2' U B 34 6.664 16.537 4.119 1.00 36.14 O
ATOM 13 C1' U B 34 4.510 15.483 3.821 1.00 34.58 C
ATOM 14 N1 U B 34 4.760 14.044 3.659 1.00 32.60 N
ATOM 15 C2 U B 34 4.520 13.229 4.751 1.00 32.25 C
ATOM 16 O2 U B 34 4.151 13.662 5.831 1.00 32.86 O
ATOM 17 N3 U B 34 4.733 11.891 4.535 1.00 30.87 N
ATOM 18 C4 U B 34 5.164 11.299 3.366 1.00 30.89 C
ATOM 19 O4 U B 34 5.277 10.073 3.317 1.00 30.55 O
ATOM 20 C5 U B 34 5.412 12.211 2.290 1.00 31.10 C
ATOM 21 C6 U B 34 5.206 13.521 2.470 1.00 32.20 C
ATOM 22 P C B 35 5.776 19.738 4.287 1.00 41.10 P
ATOM 23 OP1 C B 35 5.196 20.873 3.523 1.00 40.05 O
ATOM 24 OP2 C B 35 7.149 19.271 3.971 1.00 39.99 O
ATOM 25 O5' C B 35 5.717 20.109 5.833 1.00 40.35 O
TER

Atoms:
OP1: (3.136,13.723,15.068)
OP2: (4.346,11.481,14.807)
C3': (2.188,12.697,10.397)
C1': (4.033,12.457,8.944)
C5': (3.504,14.078,12.121)
O4': (4.386,13.380,9.966)
C8: (5.060,10.703,10.471)
O2': (1.970,13.331,8.057)
C6: (6.049,8.056,8.390)
C5: (5.608,9.191,9.084)
C4: (5.048,10.211,8.335)
P: (4.135,12.882,14.365)
C4': (3.188,13.806,10.670)
C2': (2.504,12.367,8.944)
C2: (5.339,9.106,6.454)
N1: (5.899,8.042,7.047)
N3: (4.884,10.233,7.002)
N6: (6.601,6.998,8.990)
N7: (5.612,9.514,10.433)
N9: (4.687,11.182,9.239)
O5': (3.745,12.860,12.819)
O3': (0.860,13.194,10.537)
C4: (5.164,11.299,3.366)
N3: (4.733,11.891,4.535)
OP1: (3.849,18.703,-1.246)
OP2: (5.413,16.710,-1.692)
C2: (4.520,13.229,4.751)
C1': (4.510,15.483,3.821)
C3': (4.799,17.678,2.995)
O5': (4.076,16.843,0.404)
O4': (3.327,15.804,3.121)
C5': (2.993,17.266,1.228)
P: (4.147,17.250,-1.134)
C4': (3.388,17.187,2.681)
C2': (5.584,16.385,3.219)
O2': (6.664,16.537,4.119)
N1: (4.760,14.044,3.659)
O4: (5.277,10.073,3.317)
O2: (4.151,13.662,5.831)
C6: (5.206,13.521,2.470)
C5: (5.412,12.211,2.290)
O3': (4.782,18.482,4.168)
Image (generated by PyMOL):
PyMOL image
show in jmol