ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CD6:0317:0334

Extra

PDB:
ATOM 1 O3' U A 316 18.875 124.669 21.931 1.00 50.28 O
ATOM 2 P A A 317 18.377 124.626 23.462 1.00 50.25 P
ATOM 3 OP1 A A 317 19.196 123.580 24.120 1.00 49.72 O
ATOM 4 OP2 A A 317 16.903 124.506 23.454 1.00 50.64 O
ATOM 5 O5' A A 317 18.704 126.069 24.069 1.00 50.11 O
ATOM 6 C5' A A 317 19.853 126.300 24.924 1.00 46.31 C
ATOM 7 C4' A A 317 19.829 127.711 25.486 1.00 44.66 C
ATOM 8 O4' A A 317 19.720 128.660 24.388 1.00 45.41 O
ATOM 9 C3' A A 317 18.682 128.051 26.440 1.00 44.72 C
ATOM 10 O3' A A 317 19.075 129.096 27.350 1.00 43.95 O
ATOM 11 C2' A A 317 17.668 128.680 25.496 1.00 44.94 C
ATOM 12 O2' A A 317 16.754 129.525 26.158 1.00 45.28 O
ATOM 13 C1' A A 317 18.597 129.491 24.600 1.00 46.55 C
ATOM 14 N9 A A 317 18.063 129.907 23.303 1.00 49.95 N
ATOM 15 C8 A A 317 17.314 129.189 22.405 1.00 51.70 C
ATOM 16 N7 A A 317 17.003 129.857 21.321 1.00 52.23 N
ATOM 17 C5 A A 317 17.586 131.100 21.518 1.00 51.48 C
ATOM 18 C6 A A 317 17.624 132.260 20.733 1.00 50.64 C
ATOM 19 N6 A A 317 17.056 132.361 19.533 1.00 48.73 N
ATOM 20 N1 A A 317 18.282 133.329 21.226 1.00 51.89 N
ATOM 21 C2 A A 317 18.866 133.227 22.421 1.00 51.26 C
ATOM 22 N3 A A 317 18.906 132.193 23.249 1.00 52.04 N
ATOM 23 C4 A A 317 18.238 131.147 22.735 1.00 51.42 C
ATOM 24 P C A 318 19.892 128.759 28.699 1.00 42.35 P
ATOM 25 OP1 C A 318 19.857 130.017 29.497 1.00 38.13 O
ATOM 26 OP2 C A 318 21.204 128.138 28.340 1.00 35.98 O
ATOM 27 O5' C A 318 19.023 127.658 29.462 1.00 42.54 O
TER

ATOM 1 O3' G B 333 27.580 135.313 26.769 1.00 42.69 O
ATOM 2 P U B 334 27.637 134.019 25.833 1.00 45.23 P
ATOM 3 OP1 U B 334 28.967 133.398 26.044 1.00 43.71 O
ATOM 4 OP2 U B 334 27.223 134.408 24.466 1.00 46.36 O
ATOM 5 O5' U B 334 26.520 133.057 26.439 1.00 47.59 O
ATOM 6 C5' U B 334 26.819 132.141 27.515 1.00 47.55 C
ATOM 7 C4' U B 334 25.686 131.163 27.692 1.00 46.55 C
ATOM 8 O4' U B 334 24.489 131.902 28.036 1.00 48.88 O
ATOM 9 C3' U B 334 25.307 130.386 26.446 1.00 46.22 C
ATOM 10 O3' U B 334 26.127 129.232 26.289 1.00 43.90 O
ATOM 11 C2' U B 334 23.844 130.050 26.703 1.00 48.88 C
ATOM 12 O2' U B 334 23.665 128.964 27.590 1.00 51.05 O
ATOM 13 C1' U B 334 23.366 131.321 27.403 1.00 49.68 C
ATOM 14 N1 U B 334 22.776 132.324 26.504 1.00 53.60 N
ATOM 15 C2 U B 334 21.505 132.090 26.029 1.00 54.57 C
ATOM 16 O2 U B 334 20.882 131.079 26.290 1.00 55.93 O
ATOM 17 N3 U B 334 20.992 133.081 25.229 1.00 55.49 N
ATOM 18 C4 U B 334 21.613 134.253 24.854 1.00 55.90 C
ATOM 19 O4 U B 334 20.992 135.085 24.189 1.00 55.09 O
ATOM 20 C5 U B 334 22.937 134.409 25.363 1.00 56.24 C
ATOM 21 C6 U B 334 23.459 133.466 26.152 1.00 55.51 C
ATOM 22 P A B 335 26.674 128.843 24.832 1.00 44.27 P
ATOM 23 OP1 A B 335 27.680 127.764 24.959 1.00 43.30 O
ATOM 24 OP2 A B 335 27.044 130.101 24.139 1.00 47.51 O
ATOM 25 O5' A B 335 25.393 128.245 24.100 1.00 47.72 O
TER

Atoms:
OP1: (19.196,123.580,24.120)
OP2: (16.903,124.506,23.454)
C3': (18.682,128.051,26.440)
C1': (18.597,129.491,24.600)
C5': (19.853,126.300,24.924)
O4': (19.720,128.660,24.388)
C8: (17.314,129.189,22.405)
O2': (16.754,129.525,26.158)
C6: (17.624,132.260,20.733)
C5: (17.586,131.100,21.518)
C4: (18.238,131.147,22.735)
P: (18.377,124.626,23.462)
C4': (19.829,127.711,25.486)
C2': (17.668,128.680,25.496)
C2: (18.866,133.227,22.421)
N1: (18.282,133.329,21.226)
N3: (18.906,132.193,23.249)
N6: (17.056,132.361,19.533)
N7: (17.003,129.857,21.321)
N9: (18.063,129.907,23.303)
O5': (18.704,126.069,24.069)
O3': (19.075,129.096,27.350)
C4: (21.613,134.253,24.854)
N3: (20.992,133.081,25.229)
OP1: (28.967,133.398,26.044)
OP2: (27.223,134.408,24.466)
C2: (21.505,132.090,26.029)
C1': (23.366,131.321,27.403)
C3': (25.307,130.386,26.446)
O5': (26.520,133.057,26.439)
O4': (24.489,131.902,28.036)
C5': (26.819,132.141,27.515)
P: (27.637,134.019,25.833)
C4': (25.686,131.163,27.692)
C2': (23.844,130.050,26.703)
O2': (23.665,128.964,27.590)
N1: (22.776,132.324,26.504)
O4: (20.992,135.085,24.189)
O2: (20.882,131.079,26.290)
C6: (23.459,133.466,26.152)
C5: (22.937,134.409,25.363)
O3': (26.127,129.232,26.289)
Image (generated by PyMOL):
PyMOL image
show in jmol