Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21098:21112
Extra
PDB:
ATOM 1 O3' U A1097 -39.373 11.071 79.722 1.00 63.83 O
ATOM 2 P A A1098 -38.311 12.178 80.201 1.00 56.97 P
ATOM 3 OP1 A A1098 -36.976 11.590 80.003 1.00 56.85 O
ATOM 4 OP2 A A1098 -38.700 12.619 81.561 1.00 57.05 O
ATOM 5 O5' A A1098 -38.525 13.368 79.166 1.00 57.00 O
ATOM 6 C5' A A1098 -37.805 13.397 77.941 1.00 56.94 C
ATOM 7 C4' A A1098 -37.997 14.690 77.190 1.00 57.01 C
ATOM 8 O4' A A1098 -39.402 14.974 77.063 1.00 57.17 O
ATOM 9 C3' A A1098 -37.447 15.933 77.845 1.00 57.01 C
ATOM 10 O3' A A1098 -36.061 16.074 77.686 1.00 56.90 O
ATOM 11 C2' A A1098 -38.243 17.030 77.175 1.00 57.16 C
ATOM 12 O2' A A1098 -37.768 17.248 75.865 1.00 57.17 O
ATOM 13 C1' A A1098 -39.606 16.373 77.067 1.00 57.27 C
ATOM 14 N9 A A1098 -40.484 16.722 78.194 1.00 57.36 N
ATOM 15 C8 A A1098 -40.944 15.860 79.143 1.00 57.37 C
ATOM 16 N7 A A1098 -41.730 16.406 80.023 1.00 57.49 N
ATOM 17 C5 A A1098 -41.795 17.719 79.603 1.00 57.57 C
ATOM 18 C6 A A1098 -42.482 18.791 80.146 1.00 57.73 C
ATOM 19 N6 A A1098 -43.241 18.644 81.238 1.00 57.84 N
ATOM 20 N1 A A1098 -42.351 19.975 79.533 1.00 57.81 N
ATOM 21 C2 A A1098 -41.590 20.021 78.445 1.00 57.73 C
ATOM 22 N3 A A1098 -40.898 19.084 77.838 1.00 57.58 N
ATOM 23 C4 A A1098 -41.044 17.935 78.483 1.00 57.50 C
ATOM 24 P U A1099 -35.168 16.458 78.953 1.00 54.66 P
ATOM 25 OP1 U A1099 -33.745 16.189 78.604 1.00 54.57 O
ATOM 26 OP2 U A1099 -35.774 15.754 80.102 1.00 54.68 O
ATOM 27 O5' U A1099 -35.387 18.029 79.086 1.00 54.75 O
TER
ATOM 1 O3' U B1111 -47.680 21.706 88.767 1.00 53.27 O
ATOM 2 P G B1112 -48.802 20.862 87.957 1.00 58.15 P
ATOM 3 OP1 G B1112 -50.035 21.706 87.830 1.00 58.47 O
ATOM 4 OP2 G B1112 -48.919 19.548 88.617 1.00 58.14 O
ATOM 5 O5' G B1112 -48.131 20.681 86.530 1.00 57.93 O
ATOM 6 C5' G B1112 -47.348 21.713 85.960 1.00 57.81 C
ATOM 7 C4' G B1112 -46.562 21.203 84.787 1.00 57.59 C
ATOM 8 O4' G B1112 -45.376 20.531 85.258 1.00 57.34 O
ATOM 9 C3' G B1112 -47.248 20.154 83.914 1.00 57.63 C
ATOM 10 O3' G B1112 -48.145 20.721 83.006 1.00 57.85 O
ATOM 11 C2' G B1112 -46.066 19.530 83.234 1.00 57.35 C
ATOM 12 O2' G B1112 -45.557 20.416 82.257 1.00 57.31 O
ATOM 13 C1' G B1112 -45.079 19.455 84.404 1.00 57.20 C
ATOM 14 N9 G B1112 -45.283 18.211 85.144 1.00 57.19 N
ATOM 15 C8 G B1112 -46.086 17.952 86.213 1.00 57.37 C
ATOM 16 N7 G B1112 -46.086 16.695 86.527 1.00 57.34 N
ATOM 17 C5 G B1112 -45.256 16.112 85.592 1.00 57.13 C
ATOM 18 C6 G B1112 -44.855 14.779 85.423 1.00 57.02 C
ATOM 19 O6 G B1112 -45.175 13.796 86.087 1.00 57.09 O
ATOM 20 N1 G B1112 -44.013 14.647 84.342 1.00 56.82 N
ATOM 21 C2 G B1112 -43.595 15.657 83.527 1.00 56.76 C
ATOM 22 N2 G B1112 -42.770 15.322 82.531 1.00 56.59 N
ATOM 23 N3 G B1112 -43.950 16.906 83.672 1.00 56.86 N
ATOM 24 C4 G B1112 -44.770 17.039 84.721 1.00 57.04 C
ATOM 25 P A B1113 -49.245 19.838 82.251 1.00 55.74 P
ATOM 26 OP1 A B1113 -50.139 20.802 81.593 1.00 56.02 O
ATOM 27 OP2 A B1113 -49.804 18.892 83.223 1.00 55.81 O
ATOM 28 O5' A B1113 -48.425 19.038 81.158 1.00 55.51 O
TER
ATOM 2 P A A1098 -38.311 12.178 80.201 1.00 56.97 P
ATOM 3 OP1 A A1098 -36.976 11.590 80.003 1.00 56.85 O
ATOM 4 OP2 A A1098 -38.700 12.619 81.561 1.00 57.05 O
ATOM 5 O5' A A1098 -38.525 13.368 79.166 1.00 57.00 O
ATOM 6 C5' A A1098 -37.805 13.397 77.941 1.00 56.94 C
ATOM 7 C4' A A1098 -37.997 14.690 77.190 1.00 57.01 C
ATOM 8 O4' A A1098 -39.402 14.974 77.063 1.00 57.17 O
ATOM 9 C3' A A1098 -37.447 15.933 77.845 1.00 57.01 C
ATOM 10 O3' A A1098 -36.061 16.074 77.686 1.00 56.90 O
ATOM 11 C2' A A1098 -38.243 17.030 77.175 1.00 57.16 C
ATOM 12 O2' A A1098 -37.768 17.248 75.865 1.00 57.17 O
ATOM 13 C1' A A1098 -39.606 16.373 77.067 1.00 57.27 C
ATOM 14 N9 A A1098 -40.484 16.722 78.194 1.00 57.36 N
ATOM 15 C8 A A1098 -40.944 15.860 79.143 1.00 57.37 C
ATOM 16 N7 A A1098 -41.730 16.406 80.023 1.00 57.49 N
ATOM 17 C5 A A1098 -41.795 17.719 79.603 1.00 57.57 C
ATOM 18 C6 A A1098 -42.482 18.791 80.146 1.00 57.73 C
ATOM 19 N6 A A1098 -43.241 18.644 81.238 1.00 57.84 N
ATOM 20 N1 A A1098 -42.351 19.975 79.533 1.00 57.81 N
ATOM 21 C2 A A1098 -41.590 20.021 78.445 1.00 57.73 C
ATOM 22 N3 A A1098 -40.898 19.084 77.838 1.00 57.58 N
ATOM 23 C4 A A1098 -41.044 17.935 78.483 1.00 57.50 C
ATOM 24 P U A1099 -35.168 16.458 78.953 1.00 54.66 P
ATOM 25 OP1 U A1099 -33.745 16.189 78.604 1.00 54.57 O
ATOM 26 OP2 U A1099 -35.774 15.754 80.102 1.00 54.68 O
ATOM 27 O5' U A1099 -35.387 18.029 79.086 1.00 54.75 O
TER
ATOM 1 O3' U B1111 -47.680 21.706 88.767 1.00 53.27 O
ATOM 2 P G B1112 -48.802 20.862 87.957 1.00 58.15 P
ATOM 3 OP1 G B1112 -50.035 21.706 87.830 1.00 58.47 O
ATOM 4 OP2 G B1112 -48.919 19.548 88.617 1.00 58.14 O
ATOM 5 O5' G B1112 -48.131 20.681 86.530 1.00 57.93 O
ATOM 6 C5' G B1112 -47.348 21.713 85.960 1.00 57.81 C
ATOM 7 C4' G B1112 -46.562 21.203 84.787 1.00 57.59 C
ATOM 8 O4' G B1112 -45.376 20.531 85.258 1.00 57.34 O
ATOM 9 C3' G B1112 -47.248 20.154 83.914 1.00 57.63 C
ATOM 10 O3' G B1112 -48.145 20.721 83.006 1.00 57.85 O
ATOM 11 C2' G B1112 -46.066 19.530 83.234 1.00 57.35 C
ATOM 12 O2' G B1112 -45.557 20.416 82.257 1.00 57.31 O
ATOM 13 C1' G B1112 -45.079 19.455 84.404 1.00 57.20 C
ATOM 14 N9 G B1112 -45.283 18.211 85.144 1.00 57.19 N
ATOM 15 C8 G B1112 -46.086 17.952 86.213 1.00 57.37 C
ATOM 16 N7 G B1112 -46.086 16.695 86.527 1.00 57.34 N
ATOM 17 C5 G B1112 -45.256 16.112 85.592 1.00 57.13 C
ATOM 18 C6 G B1112 -44.855 14.779 85.423 1.00 57.02 C
ATOM 19 O6 G B1112 -45.175 13.796 86.087 1.00 57.09 O
ATOM 20 N1 G B1112 -44.013 14.647 84.342 1.00 56.82 N
ATOM 21 C2 G B1112 -43.595 15.657 83.527 1.00 56.76 C
ATOM 22 N2 G B1112 -42.770 15.322 82.531 1.00 56.59 N
ATOM 23 N3 G B1112 -43.950 16.906 83.672 1.00 56.86 N
ATOM 24 C4 G B1112 -44.770 17.039 84.721 1.00 57.04 C
ATOM 25 P A B1113 -49.245 19.838 82.251 1.00 55.74 P
ATOM 26 OP1 A B1113 -50.139 20.802 81.593 1.00 56.02 O
ATOM 27 OP2 A B1113 -49.804 18.892 83.223 1.00 55.81 O
ATOM 28 O5' A B1113 -48.425 19.038 81.158 1.00 55.51 O
TER
Atoms:
OP1: (-36.976,11.590,80.003)
OP2: (-38.700,12.619,81.561)
C3': (-37.447,15.933,77.845)
C1': (-39.606,16.373,77.067)
C5': (-37.805,13.397,77.941)
O4': (-39.402,14.974,77.063)
C8: (-40.944,15.860,79.143)
O2': (-37.768,17.248,75.865)
C6: (-42.482,18.791,80.146)
C5: (-41.795,17.719,79.603)
C4: (-41.044,17.935,78.483)
P: (-38.311,12.178,80.201)
C4': (-37.997,14.690,77.190)
C2': (-38.243,17.030,77.175)
C2: (-41.590,20.021,78.445)
N1: (-42.351,19.975,79.533)
N3: (-40.898,19.084,77.838)
N6: (-43.241,18.644,81.238)
N7: (-41.730,16.406,80.023)
N9: (-40.484,16.722,78.194)
O5': (-38.525,13.368,79.166)
O3': (-36.061,16.074,77.686)
OP2: (-38.700,12.619,81.561)
C3': (-37.447,15.933,77.845)
C1': (-39.606,16.373,77.067)
C5': (-37.805,13.397,77.941)
O4': (-39.402,14.974,77.063)
C8: (-40.944,15.860,79.143)
O2': (-37.768,17.248,75.865)
C6: (-42.482,18.791,80.146)
C5: (-41.795,17.719,79.603)
C4: (-41.044,17.935,78.483)
P: (-38.311,12.178,80.201)
C4': (-37.997,14.690,77.190)
C2': (-38.243,17.030,77.175)
C2: (-41.590,20.021,78.445)
N1: (-42.351,19.975,79.533)
N3: (-40.898,19.084,77.838)
N6: (-43.241,18.644,81.238)
N7: (-41.730,16.406,80.023)
N9: (-40.484,16.722,78.194)
O5': (-38.525,13.368,79.166)
O3': (-36.061,16.074,77.686)
OP1: (-50.035,21.706,87.830)
OP2: (-48.919,19.548,88.617)
C3': (-47.248,20.154,83.914)
C1': (-45.079,19.455,84.404)
C5': (-47.348,21.713,85.960)
O6: (-45.175,13.796,86.087)
O4': (-45.376,20.531,85.258)
C8: (-46.086,17.952,86.213)
C2: (-43.595,15.657,83.527)
C6: (-44.855,14.779,85.423)
C5: (-45.256,16.112,85.592)
C4: (-44.770,17.039,84.721)
P: (-48.802,20.862,87.957)
C4': (-46.562,21.203,84.787)
C2': (-46.066,19.530,83.234)
O2': (-45.557,20.416,82.257)
N1: (-44.013,14.647,84.342)
N2: (-42.770,15.322,82.531)
N3: (-43.950,16.906,83.672)
N7: (-46.086,16.695,86.527)
N9: (-45.283,18.211,85.144)
O5': (-48.131,20.681,86.530)
O3': (-48.145,20.721,83.006)
OP2: (-48.919,19.548,88.617)
C3': (-47.248,20.154,83.914)
C1': (-45.079,19.455,84.404)
C5': (-47.348,21.713,85.960)
O6: (-45.175,13.796,86.087)
O4': (-45.376,20.531,85.258)
C8: (-46.086,17.952,86.213)
C2: (-43.595,15.657,83.527)
C6: (-44.855,14.779,85.423)
C5: (-45.256,16.112,85.592)
C4: (-44.770,17.039,84.721)
P: (-48.802,20.862,87.957)
C4': (-46.562,21.203,84.787)
C2': (-46.066,19.530,83.234)
O2': (-45.557,20.416,82.257)
N1: (-44.013,14.647,84.342)
N2: (-42.770,15.322,82.531)
N3: (-43.950,16.906,83.672)
N7: (-46.086,16.695,86.527)
N9: (-45.283,18.211,85.144)
O5': (-48.131,20.681,86.530)
O3': (-48.145,20.721,83.006)
Image (generated by PyMOL):