ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CPW:0317:0334

Extra

PDB:
ATOM 1 O3' U A 316 18.549 124.178 21.813 1.00 57.98 O
ATOM 2 P A A 317 18.063 124.039 23.348 1.00 56.80 P
ATOM 3 OP1 A A 317 18.965 123.015 23.938 1.00 57.15 O
ATOM 4 OP2 A A 317 16.594 123.839 23.404 1.00 54.33 O
ATOM 5 O5' A A 317 18.372 125.456 24.016 1.00 56.72 O
ATOM 6 C5' A A 317 19.580 125.684 24.790 1.00 55.06 C
ATOM 7 C4' A A 317 19.583 127.088 25.366 1.00 53.55 C
ATOM 8 O4' A A 317 19.480 128.044 24.277 1.00 54.94 O
ATOM 9 C3' A A 317 18.442 127.417 26.330 1.00 52.42 C
ATOM 10 O3' A A 317 18.860 128.429 27.251 1.00 52.52 O
ATOM 11 C2' A A 317 17.438 128.114 25.425 1.00 52.88 C
ATOM 12 O2' A A 317 16.591 128.989 26.131 1.00 49.63 O
ATOM 13 C1' A A 317 18.374 128.888 24.500 1.00 54.72 C
ATOM 14 N9 A A 317 17.824 129.293 23.208 1.00 57.80 N
ATOM 15 C8 A A 317 17.056 128.579 22.320 1.00 58.90 C
ATOM 16 N7 A A 317 16.721 129.256 21.249 1.00 59.11 N
ATOM 17 C5 A A 317 17.311 130.496 21.443 1.00 59.58 C
ATOM 18 C6 A A 317 17.331 131.660 20.667 1.00 59.51 C
ATOM 19 N6 A A 317 16.722 131.771 19.489 1.00 59.74 N
ATOM 20 N1 A A 317 18.010 132.723 21.146 1.00 60.89 N
ATOM 21 C2 A A 317 18.628 132.612 22.328 1.00 61.24 C
ATOM 22 N3 A A 317 18.683 131.572 23.149 1.00 60.69 N
ATOM 23 C4 A A 317 17.995 130.532 22.643 1.00 59.64 C
ATOM 24 P C A 318 19.686 128.051 28.575 1.00 52.35 P
ATOM 25 OP1 C A 318 19.668 129.281 29.402 1.00 49.23 O
ATOM 26 OP2 C A 318 20.987 127.448 28.177 1.00 49.26 O
ATOM 27 O5' C A 318 18.806 126.941 29.310 1.00 52.76 O
TER

ATOM 1 O3' G B 333 27.448 134.552 26.735 1.00 55.27 O
ATOM 2 P U B 334 27.443 133.316 25.709 1.00 57.34 P
ATOM 3 OP1 U B 334 28.758 132.626 25.825 1.00 58.05 O
ATOM 4 OP2 U B 334 26.983 133.797 24.379 1.00 58.42 O
ATOM 5 O5' U B 334 26.325 132.337 26.278 1.00 57.12 O
ATOM 6 C5' U B 334 26.607 131.416 27.348 1.00 56.07 C
ATOM 7 C4' U B 334 25.456 130.459 27.514 1.00 56.13 C
ATOM 8 O4' U B 334 24.258 131.203 27.851 1.00 55.71 O
ATOM 9 C3' U B 334 25.090 129.696 26.253 1.00 56.71 C
ATOM 10 O3' U B 334 25.880 128.530 26.101 1.00 56.90 O
ATOM 11 C2' U B 334 23.616 129.385 26.459 1.00 57.31 C
ATOM 12 O2' U B 334 23.402 128.256 27.282 1.00 58.03 O
ATOM 13 C1' U B 334 23.140 130.636 27.195 1.00 57.58 C
ATOM 14 N1 U B 334 22.558 131.648 26.297 1.00 59.99 N
ATOM 15 C2 U B 334 21.262 131.447 25.858 1.00 61.08 C
ATOM 16 O2 U B 334 20.598 130.481 26.184 1.00 62.47 O
ATOM 17 N3 U B 334 20.773 132.416 25.018 1.00 62.53 N
ATOM 18 C4 U B 334 21.433 133.538 24.573 1.00 62.90 C
ATOM 19 O4 U B 334 20.875 134.288 23.773 1.00 64.20 O
ATOM 20 C5 U B 334 22.765 133.685 25.074 1.00 61.83 C
ATOM 21 C6 U B 334 23.269 132.759 25.898 1.00 61.39 C
ATOM 22 P A B 335 26.328 128.075 24.630 1.00 58.68 P
ATOM 23 OP1 A B 335 27.261 126.924 24.759 1.00 58.16 O
ATOM 24 OP2 A B 335 26.759 129.284 23.879 1.00 59.04 O
ATOM 25 O5' A B 335 24.969 127.566 23.978 1.00 59.34 O
TER

Atoms:
OP1: (18.965,123.015,23.938)
OP2: (16.594,123.839,23.404)
C3': (18.442,127.417,26.330)
C1': (18.374,128.888,24.500)
C5': (19.580,125.684,24.790)
O4': (19.480,128.044,24.277)
C8: (17.056,128.579,22.320)
O2': (16.591,128.989,26.131)
C6: (17.331,131.660,20.667)
C5: (17.311,130.496,21.443)
C4: (17.995,130.532,22.643)
P: (18.063,124.039,23.348)
C4': (19.583,127.088,25.366)
C2': (17.438,128.114,25.425)
C2: (18.628,132.612,22.328)
N1: (18.010,132.723,21.146)
N3: (18.683,131.572,23.149)
N6: (16.722,131.771,19.489)
N7: (16.721,129.256,21.249)
N9: (17.824,129.293,23.208)
O5': (18.372,125.456,24.016)
O3': (18.860,128.429,27.251)
C4: (21.433,133.538,24.573)
N3: (20.773,132.416,25.018)
OP1: (28.758,132.626,25.825)
OP2: (26.983,133.797,24.379)
C2: (21.262,131.447,25.858)
C1': (23.140,130.636,27.195)
C3': (25.090,129.696,26.253)
O5': (26.325,132.337,26.278)
O4': (24.258,131.203,27.851)
C5': (26.607,131.416,27.348)
P: (27.443,133.316,25.709)
C4': (25.456,130.459,27.514)
C2': (23.616,129.385,26.459)
O2': (23.402,128.256,27.282)
N1: (22.558,131.648,26.297)
O4: (20.875,134.288,23.773)
O2: (20.598,130.481,26.184)
C6: (23.269,132.759,25.898)
C5: (22.765,133.685,25.074)
O3': (25.880,128.530,26.101)
Image (generated by PyMOL):
PyMOL image
show in jmol