Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOT:A61:A34
Extra
PDB:
ATOM 1 O3' U A 60 -5.424 -11.971 14.314 1.00 42.65 O
ATOM 2 P A A 61 -4.010 -11.217 14.175 1.00 43.75 P
ATOM 3 OP1 A A 61 -3.044 -12.063 14.906 1.00 43.76 O
ATOM 4 OP2 A A 61 -4.163 -9.779 14.533 1.00 42.76 O
ATOM 5 O5' A A 61 -3.686 -11.270 12.608 1.00 43.24 O
ATOM 6 C5' A A 61 -3.386 -12.495 11.952 1.00 42.68 C
ATOM 7 C4' A A 61 -3.165 -12.257 10.469 1.00 42.71 C
ATOM 8 O4' A A 61 -4.390 -11.794 9.833 1.00 42.95 O
ATOM 9 C3' A A 61 -2.164 -11.176 10.103 1.00 44.44 C
ATOM 10 O3' A A 61 -0.832 -11.648 10.183 1.00 46.71 O
ATOM 11 C2' A A 61 -2.545 -10.884 8.661 1.00 43.66 C
ATOM 12 O2' A A 61 -2.091 -11.913 7.808 1.00 43.37 O
ATOM 13 C1' A A 61 -4.069 -10.909 8.765 1.00 41.43 C
ATOM 14 N9 A A 61 -4.644 -9.603 9.070 1.00 40.81 N
ATOM 15 C8 A A 61 -4.968 -9.100 10.311 1.00 40.08 C
ATOM 16 N7 A A 61 -5.502 -7.902 10.272 1.00 39.09 N
ATOM 17 C5 A A 61 -5.525 -7.589 8.919 1.00 38.87 C
ATOM 18 C6 A A 61 -5.968 -6.456 8.229 1.00 38.76 C
ATOM 19 N6 A A 61 -6.532 -5.399 8.829 1.00 38.89 N
ATOM 20 N1 A A 61 -5.829 -6.444 6.881 1.00 39.56 N
ATOM 21 C2 A A 61 -5.312 -7.530 6.281 1.00 39.52 C
ATOM 22 N3 A A 61 -4.871 -8.664 6.827 1.00 39.82 N
ATOM 23 C4 A A 61 -4.998 -8.625 8.166 1.00 39.22 C
ATOM 24 P U A 62 0.307 -10.676 10.748 1.00 49.16 P
ATOM 25 OP1 U A 62 1.470 -11.547 11.037 1.00 49.93 O
ATOM 26 OP2 U A 62 -0.224 -9.785 11.809 1.00 49.77 O
ATOM 27 O5' U A 62 0.635 -9.716 9.526 1.00 49.68 O
TER
ATOM 1 O3' U B 33 -3.200 -15.234 -1.924 1.00 52.67 O
ATOM 2 P U B 34 -4.424 -16.017 -1.200 1.00 51.35 P
ATOM 3 OP1 U B 34 -4.033 -17.457 -1.215 1.00 49.95 O
ATOM 4 OP2 U B 34 -5.757 -15.609 -1.752 1.00 49.85 O
ATOM 5 O5' U B 34 -4.378 -15.520 0.321 1.00 48.74 O
ATOM 6 C5' U B 34 -3.317 -15.907 1.192 1.00 46.39 C
ATOM 7 C4' U B 34 -3.712 -15.681 2.632 1.00 45.00 C
ATOM 8 O4' U B 34 -3.584 -14.274 2.948 1.00 44.04 O
ATOM 9 C3' U B 34 -5.146 -16.084 2.979 1.00 45.36 C
ATOM 10 O3' U B 34 -5.140 -16.870 4.162 1.00 46.59 O
ATOM 11 C2' U B 34 -5.865 -14.744 3.161 1.00 44.21 C
ATOM 12 O2' U B 34 -6.913 -14.755 4.121 1.00 44.78 O
ATOM 13 C1' U B 34 -4.725 -13.863 3.657 1.00 43.59 C
ATOM 14 N1 U B 34 -4.917 -12.416 3.474 1.00 41.93 N
ATOM 15 C2 U B 34 -4.587 -11.617 4.547 1.00 40.51 C
ATOM 16 O2 U B 34 -4.175 -12.066 5.597 1.00 41.45 O
ATOM 17 N3 U B 34 -4.766 -10.283 4.359 1.00 40.56 N
ATOM 18 C4 U B 34 -5.240 -9.659 3.228 1.00 40.35 C
ATOM 19 O4 U B 34 -5.320 -8.428 3.217 1.00 40.72 O
ATOM 20 C5 U B 34 -5.583 -10.554 2.147 1.00 40.45 C
ATOM 21 C6 U B 34 -5.407 -11.873 2.306 1.00 41.32 C
ATOM 22 P C B 35 -6.330 -17.919 4.431 1.00 49.27 P
ATOM 23 OP1 C B 35 -6.163 -19.100 3.534 1.00 48.38 O
ATOM 24 OP2 C B 35 -7.620 -17.173 4.426 1.00 47.38 O
ATOM 25 O5' C B 35 -6.059 -18.396 5.918 1.00 47.63 O
TER
ATOM 2 P A A 61 -4.010 -11.217 14.175 1.00 43.75 P
ATOM 3 OP1 A A 61 -3.044 -12.063 14.906 1.00 43.76 O
ATOM 4 OP2 A A 61 -4.163 -9.779 14.533 1.00 42.76 O
ATOM 5 O5' A A 61 -3.686 -11.270 12.608 1.00 43.24 O
ATOM 6 C5' A A 61 -3.386 -12.495 11.952 1.00 42.68 C
ATOM 7 C4' A A 61 -3.165 -12.257 10.469 1.00 42.71 C
ATOM 8 O4' A A 61 -4.390 -11.794 9.833 1.00 42.95 O
ATOM 9 C3' A A 61 -2.164 -11.176 10.103 1.00 44.44 C
ATOM 10 O3' A A 61 -0.832 -11.648 10.183 1.00 46.71 O
ATOM 11 C2' A A 61 -2.545 -10.884 8.661 1.00 43.66 C
ATOM 12 O2' A A 61 -2.091 -11.913 7.808 1.00 43.37 O
ATOM 13 C1' A A 61 -4.069 -10.909 8.765 1.00 41.43 C
ATOM 14 N9 A A 61 -4.644 -9.603 9.070 1.00 40.81 N
ATOM 15 C8 A A 61 -4.968 -9.100 10.311 1.00 40.08 C
ATOM 16 N7 A A 61 -5.502 -7.902 10.272 1.00 39.09 N
ATOM 17 C5 A A 61 -5.525 -7.589 8.919 1.00 38.87 C
ATOM 18 C6 A A 61 -5.968 -6.456 8.229 1.00 38.76 C
ATOM 19 N6 A A 61 -6.532 -5.399 8.829 1.00 38.89 N
ATOM 20 N1 A A 61 -5.829 -6.444 6.881 1.00 39.56 N
ATOM 21 C2 A A 61 -5.312 -7.530 6.281 1.00 39.52 C
ATOM 22 N3 A A 61 -4.871 -8.664 6.827 1.00 39.82 N
ATOM 23 C4 A A 61 -4.998 -8.625 8.166 1.00 39.22 C
ATOM 24 P U A 62 0.307 -10.676 10.748 1.00 49.16 P
ATOM 25 OP1 U A 62 1.470 -11.547 11.037 1.00 49.93 O
ATOM 26 OP2 U A 62 -0.224 -9.785 11.809 1.00 49.77 O
ATOM 27 O5' U A 62 0.635 -9.716 9.526 1.00 49.68 O
TER
ATOM 1 O3' U B 33 -3.200 -15.234 -1.924 1.00 52.67 O
ATOM 2 P U B 34 -4.424 -16.017 -1.200 1.00 51.35 P
ATOM 3 OP1 U B 34 -4.033 -17.457 -1.215 1.00 49.95 O
ATOM 4 OP2 U B 34 -5.757 -15.609 -1.752 1.00 49.85 O
ATOM 5 O5' U B 34 -4.378 -15.520 0.321 1.00 48.74 O
ATOM 6 C5' U B 34 -3.317 -15.907 1.192 1.00 46.39 C
ATOM 7 C4' U B 34 -3.712 -15.681 2.632 1.00 45.00 C
ATOM 8 O4' U B 34 -3.584 -14.274 2.948 1.00 44.04 O
ATOM 9 C3' U B 34 -5.146 -16.084 2.979 1.00 45.36 C
ATOM 10 O3' U B 34 -5.140 -16.870 4.162 1.00 46.59 O
ATOM 11 C2' U B 34 -5.865 -14.744 3.161 1.00 44.21 C
ATOM 12 O2' U B 34 -6.913 -14.755 4.121 1.00 44.78 O
ATOM 13 C1' U B 34 -4.725 -13.863 3.657 1.00 43.59 C
ATOM 14 N1 U B 34 -4.917 -12.416 3.474 1.00 41.93 N
ATOM 15 C2 U B 34 -4.587 -11.617 4.547 1.00 40.51 C
ATOM 16 O2 U B 34 -4.175 -12.066 5.597 1.00 41.45 O
ATOM 17 N3 U B 34 -4.766 -10.283 4.359 1.00 40.56 N
ATOM 18 C4 U B 34 -5.240 -9.659 3.228 1.00 40.35 C
ATOM 19 O4 U B 34 -5.320 -8.428 3.217 1.00 40.72 O
ATOM 20 C5 U B 34 -5.583 -10.554 2.147 1.00 40.45 C
ATOM 21 C6 U B 34 -5.407 -11.873 2.306 1.00 41.32 C
ATOM 22 P C B 35 -6.330 -17.919 4.431 1.00 49.27 P
ATOM 23 OP1 C B 35 -6.163 -19.100 3.534 1.00 48.38 O
ATOM 24 OP2 C B 35 -7.620 -17.173 4.426 1.00 47.38 O
ATOM 25 O5' C B 35 -6.059 -18.396 5.918 1.00 47.63 O
TER
Atoms:
OP1: (-3.044,-12.063,14.906)
OP2: (-4.163,-9.779,14.533)
C3': (-2.164,-11.176,10.103)
C1': (-4.069,-10.909,8.765)
C5': (-3.386,-12.495,11.952)
O4': (-4.390,-11.794,9.833)
C8: (-4.968,-9.100,10.311)
O2': (-2.091,-11.913,7.808)
C6: (-5.968,-6.456,8.229)
C5: (-5.525,-7.589,8.919)
C4: (-4.998,-8.625,8.166)
P: (-4.010,-11.217,14.175)
C4': (-3.165,-12.257,10.469)
C2': (-2.545,-10.884,8.661)
C2: (-5.312,-7.530,6.281)
N1: (-5.829,-6.444,6.881)
N3: (-4.871,-8.664,6.827)
N6: (-6.532,-5.399,8.829)
N7: (-5.502,-7.902,10.272)
N9: (-4.644,-9.603,9.070)
O5': (-3.686,-11.270,12.608)
O3': (-0.832,-11.648,10.183)
OP2: (-4.163,-9.779,14.533)
C3': (-2.164,-11.176,10.103)
C1': (-4.069,-10.909,8.765)
C5': (-3.386,-12.495,11.952)
O4': (-4.390,-11.794,9.833)
C8: (-4.968,-9.100,10.311)
O2': (-2.091,-11.913,7.808)
C6: (-5.968,-6.456,8.229)
C5: (-5.525,-7.589,8.919)
C4: (-4.998,-8.625,8.166)
P: (-4.010,-11.217,14.175)
C4': (-3.165,-12.257,10.469)
C2': (-2.545,-10.884,8.661)
C2: (-5.312,-7.530,6.281)
N1: (-5.829,-6.444,6.881)
N3: (-4.871,-8.664,6.827)
N6: (-6.532,-5.399,8.829)
N7: (-5.502,-7.902,10.272)
N9: (-4.644,-9.603,9.070)
O5': (-3.686,-11.270,12.608)
O3': (-0.832,-11.648,10.183)
C4: (-5.240,-9.659,3.228)
N3: (-4.766,-10.283,4.359)
OP1: (-4.033,-17.457,-1.215)
OP2: (-5.757,-15.609,-1.752)
C2: (-4.587,-11.617,4.547)
C1': (-4.725,-13.863,3.657)
C3': (-5.146,-16.084,2.979)
O5': (-4.378,-15.520,0.321)
O4': (-3.584,-14.274,2.948)
C5': (-3.317,-15.907,1.192)
P: (-4.424,-16.017,-1.200)
C4': (-3.712,-15.681,2.632)
C2': (-5.865,-14.744,3.161)
O2': (-6.913,-14.755,4.121)
N1: (-4.917,-12.416,3.474)
O4: (-5.320,-8.428,3.217)
O2: (-4.175,-12.066,5.597)
C6: (-5.407,-11.873,2.306)
C5: (-5.583,-10.554,2.147)
O3': (-5.140,-16.870,4.162)
N3: (-4.766,-10.283,4.359)
OP1: (-4.033,-17.457,-1.215)
OP2: (-5.757,-15.609,-1.752)
C2: (-4.587,-11.617,4.547)
C1': (-4.725,-13.863,3.657)
C3': (-5.146,-16.084,2.979)
O5': (-4.378,-15.520,0.321)
O4': (-3.584,-14.274,2.948)
C5': (-3.317,-15.907,1.192)
P: (-4.424,-16.017,-1.200)
C4': (-3.712,-15.681,2.632)
C2': (-5.865,-14.744,3.161)
O2': (-6.913,-14.755,4.121)
N1: (-4.917,-12.416,3.474)
O4: (-5.320,-8.428,3.217)
O2: (-4.175,-12.066,5.597)
C6: (-5.407,-11.873,2.306)
C5: (-5.583,-10.554,2.147)
O3': (-5.140,-16.870,4.162)
Image (generated by PyMOL):