ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3I56:0317:0334

Extra

PDB:
ATOM 1 O3' U A 316 18.977 124.998 21.681 1.00 43.04 O
ATOM 2 P A A 317 18.545 124.900 23.229 1.00 43.47 P
ATOM 3 OP1 A A 317 19.422 123.878 23.865 1.00 39.12 O
ATOM 4 OP2 A A 317 17.070 124.717 23.242 1.00 43.01 O
ATOM 5 O5' A A 317 18.858 126.341 23.844 1.00 40.18 O
ATOM 6 C5' A A 317 20.058 126.573 24.601 1.00 39.31 C
ATOM 7 C4' A A 317 20.041 127.949 25.223 1.00 38.33 C
ATOM 8 O4' A A 317 19.973 128.946 24.167 1.00 38.84 O
ATOM 9 C3' A A 317 18.885 128.248 26.168 1.00 37.93 C
ATOM 10 O3' A A 317 19.301 129.186 27.169 1.00 39.37 O
ATOM 11 C2' A A 317 17.904 128.955 25.240 1.00 38.07 C
ATOM 12 O2' A A 317 17.005 129.798 25.924 1.00 36.97 O
ATOM 13 C1' A A 317 18.861 129.780 24.383 1.00 39.29 C
ATOM 14 N9 A A 317 18.345 130.221 23.085 1.00 41.33 N
ATOM 15 C8 A A 317 17.631 129.505 22.156 1.00 42.53 C
ATOM 16 N7 A A 317 17.289 130.201 21.099 1.00 43.46 N
ATOM 17 C5 A A 317 17.819 131.460 21.344 1.00 44.01 C
ATOM 18 C6 A A 317 17.795 132.662 20.606 1.00 44.55 C
ATOM 19 N6 A A 317 17.195 132.799 19.420 1.00 43.05 N
ATOM 20 N1 A A 317 18.418 133.735 21.138 1.00 45.72 N
ATOM 21 C2 A A 317 19.021 133.602 22.324 1.00 45.64 C
ATOM 22 N3 A A 317 19.112 132.532 23.110 1.00 44.90 N
ATOM 23 C4 A A 317 18.481 131.483 22.558 1.00 43.19 C
ATOM 24 P C A 318 20.120 128.694 28.471 1.00 39.82 P
ATOM 25 OP1 C A 318 20.253 129.879 29.350 1.00 38.93 O
ATOM 26 OP2 C A 318 21.337 127.960 28.035 1.00 38.33 O
ATOM 27 O5' C A 318 19.164 127.666 29.221 1.00 40.59 O
TER

ATOM 1 O3' G B 333 27.663 135.305 26.796 1.00 40.97 O
ATOM 2 P U B 334 27.728 134.152 25.678 1.00 42.35 P
ATOM 3 OP1 U B 334 29.053 133.483 25.771 1.00 43.16 O
ATOM 4 OP2 U B 334 27.297 134.730 24.385 1.00 42.23 O
ATOM 5 O5' U B 334 26.649 133.083 26.154 1.00 42.57 O
ATOM 6 C5' U B 334 26.935 132.183 27.244 1.00 43.29 C
ATOM 7 C4' U B 334 25.773 131.252 27.472 1.00 42.78 C
ATOM 8 O4' U B 334 24.614 132.027 27.866 1.00 42.69 O
ATOM 9 C3' U B 334 25.332 130.483 26.240 1.00 41.69 C
ATOM 10 O3' U B 334 26.124 129.307 26.080 1.00 40.95 O
ATOM 11 C2' U B 334 23.868 130.200 26.543 1.00 42.68 C
ATOM 12 O2' U B 334 23.676 129.117 27.427 1.00 42.87 O
ATOM 13 C1' U B 334 23.456 131.488 27.262 1.00 44.06 C
ATOM 14 N1 U B 334 22.890 132.510 26.371 1.00 46.97 N
ATOM 15 C2 U B 334 21.580 132.353 25.959 1.00 48.72 C
ATOM 16 O2 U B 334 20.880 131.422 26.320 1.00 50.97 O
ATOM 17 N3 U B 334 21.119 133.328 25.110 1.00 48.40 N
ATOM 18 C4 U B 334 21.817 134.419 24.645 1.00 48.62 C
ATOM 19 O4 U B 334 21.286 135.173 23.832 1.00 49.05 O
ATOM 20 C5 U B 334 23.156 134.521 25.130 1.00 48.98 C
ATOM 21 C6 U B 334 23.636 133.587 25.954 1.00 48.14 C
ATOM 22 P A B 335 26.790 128.979 24.654 1.00 41.06 P
ATOM 23 OP1 A B 335 27.837 127.943 24.842 1.00 40.80 O
ATOM 24 OP2 A B 335 27.147 130.270 24.018 1.00 41.79 O
ATOM 25 O5' A B 335 25.607 128.308 23.822 1.00 42.74 O
TER

Atoms:
OP1: (19.422,123.878,23.865)
OP2: (17.070,124.717,23.242)
C3': (18.885,128.248,26.168)
C1': (18.861,129.780,24.383)
C5': (20.058,126.573,24.601)
O4': (19.973,128.946,24.167)
C8: (17.631,129.505,22.156)
O2': (17.005,129.798,25.924)
C6: (17.795,132.662,20.606)
C5: (17.819,131.460,21.344)
C4: (18.481,131.483,22.558)
P: (18.545,124.900,23.229)
C4': (20.041,127.949,25.223)
C2': (17.904,128.955,25.240)
C2: (19.021,133.602,22.324)
N1: (18.418,133.735,21.138)
N3: (19.112,132.532,23.110)
N6: (17.195,132.799,19.420)
N7: (17.289,130.201,21.099)
N9: (18.345,130.221,23.085)
O5': (18.858,126.341,23.844)
O3': (19.301,129.186,27.169)
C4: (21.817,134.419,24.645)
N3: (21.119,133.328,25.110)
OP1: (29.053,133.483,25.771)
OP2: (27.297,134.730,24.385)
C2: (21.580,132.353,25.959)
C1': (23.456,131.488,27.262)
C3': (25.332,130.483,26.240)
O5': (26.649,133.083,26.154)
O4': (24.614,132.027,27.866)
C5': (26.935,132.183,27.244)
P: (27.728,134.152,25.678)
C4': (25.773,131.252,27.472)
C2': (23.868,130.200,26.543)
O2': (23.676,129.117,27.427)
N1: (22.890,132.510,26.371)
O4: (21.286,135.173,23.832)
O2: (20.880,131.422,26.320)
C6: (23.636,133.587,25.954)
C5: (23.156,134.521,25.130)
O3': (26.124,129.307,26.080)
Image (generated by PyMOL):
PyMOL image
show in jmol