ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A1929:A755

Extra

PDB:
ATOM 1 O3' A A1928 56.189 -76.514 -11.504 1.00 30.15 O
ATOM 2 P A A1929 57.675 -76.938 -11.872 1.00 37.49 P
ATOM 3 OP1 A A1929 57.718 -77.062 -13.348 1.00 44.51 O
ATOM 4 OP2 A A1929 58.058 -78.096 -11.013 1.00 38.69 O
ATOM 5 O5' A A1929 58.518 -75.665 -11.428 1.00 36.59 O
ATOM 6 C5' A A1929 58.181 -74.363 -11.898 1.00 32.65 C
ATOM 7 C4' A A1929 59.048 -73.352 -11.218 1.00 34.67 C
ATOM 8 O4' A A1929 58.656 -73.231 -9.833 1.00 38.88 O
ATOM 9 C3' A A1929 60.491 -73.796 -11.185 1.00 41.32 C
ATOM 10 O3' A A1929 61.085 -73.394 -12.411 1.00 38.81 O
ATOM 11 C2' A A1929 61.037 -73.118 -9.926 1.00 37.74 C
ATOM 12 O2' A A1929 61.409 -71.774 -10.093 1.00 41.72 O
ATOM 13 C1' A A1929 59.807 -73.089 -9.020 1.00 34.21 C
ATOM 14 N9 A A1929 59.796 -74.131 -7.996 1.00 32.03 N
ATOM 15 C8 A A1929 59.299 -75.405 -8.113 1.00 35.37 C
ATOM 16 N7 A A1929 59.421 -76.120 -7.025 1.00 34.35 N
ATOM 17 C5 A A1929 60.036 -75.263 -6.130 1.00 31.71 C
ATOM 18 C6 A A1929 60.430 -75.434 -4.815 1.00 31.05 C
ATOM 19 N6 A A1929 60.226 -76.568 -4.156 1.00 33.50 N
ATOM 20 N1 A A1929 61.037 -74.401 -4.187 1.00 29.82 N
ATOM 21 C2 A A1929 61.215 -73.263 -4.861 1.00 31.35 C
ATOM 22 N3 A A1929 60.876 -72.972 -6.117 1.00 34.08 N
ATOM 23 C4 A A1929 60.280 -74.034 -6.708 1.00 34.85 C
ATOM 24 P A A1930 62.177 -74.330 -13.136 1.00 40.74 P
ATOM 25 OP1 A A1930 61.788 -74.304 -14.569 1.00 26.17 O
ATOM 26 OP2 A A1930 62.326 -75.639 -12.450 1.00 35.44 O
ATOM 27 O5' A A1930 63.539 -73.519 -12.911 1.00 38.50 O
TER

ATOM 1 O3' A B 754 59.482 -62.325 -4.875 1.00 52.79 O
ATOM 2 P U B 755 60.665 -63.363 -5.127 1.00 49.38 P
ATOM 3 OP1 U B 755 60.964 -64.071 -3.838 1.00 44.36 O
ATOM 4 OP2 U B 755 61.734 -62.609 -5.838 1.00 51.08 O
ATOM 5 O5' U B 755 60.031 -64.374 -6.190 1.00 48.59 O
ATOM 6 C5' U B 755 59.213 -63.909 -7.280 1.00 47.60 C
ATOM 7 C4' U B 755 58.613 -65.092 -8.023 1.00 54.35 C
ATOM 8 O4' U B 755 59.700 -66.019 -8.238 1.00 59.44 O
ATOM 9 C3' U B 755 57.526 -65.915 -7.319 1.00 51.45 C
ATOM 10 O3' U B 755 56.206 -65.479 -7.634 1.00 51.02 O
ATOM 11 C2' U B 755 57.725 -67.321 -7.870 1.00 48.61 C
ATOM 12 O2' U B 755 57.040 -67.573 -9.080 1.00 48.53 O
ATOM 13 C1' U B 755 59.234 -67.346 -8.100 1.00 54.58 C
ATOM 14 N1 U B 755 59.964 -67.974 -6.994 1.00 53.29 N
ATOM 15 C2 U B 755 59.768 -69.320 -6.814 1.00 50.49 C
ATOM 16 O2 U B 755 58.957 -69.954 -7.470 1.00 43.71 O
ATOM 17 N3 U B 755 60.547 -69.895 -5.838 1.00 51.46 N
ATOM 18 C4 U B 755 61.470 -69.259 -5.025 1.00 55.69 C
ATOM 19 O4 U B 755 62.195 -69.935 -4.287 1.00 53.50 O
ATOM 20 C5 U B 755 61.566 -67.844 -5.231 1.00 53.43 C
ATOM 21 C6 U B 755 60.833 -67.263 -6.184 1.00 49.71 C
ATOM 22 P G B 756 54.974 -65.914 -6.704 1.00 53.31 P
ATOM 23 OP1 G B 756 55.500 -66.667 -5.546 1.00 46.38 O
ATOM 24 OP2 G B 756 53.929 -66.531 -7.542 1.00 53.70 O
ATOM 25 O5' G B 756 54.386 -64.524 -6.206 1.00 45.92 O
TER

Atoms:
OP1: (57.718,-77.062,-13.348)
OP2: (58.058,-78.096,-11.013)
C3': (60.491,-73.796,-11.185)
C1': (59.807,-73.089,-9.020)
C5': (58.181,-74.363,-11.898)
O4': (58.656,-73.231,-9.833)
C8: (59.299,-75.405,-8.113)
O2': (61.409,-71.774,-10.093)
C6: (60.430,-75.434,-4.815)
C5: (60.036,-75.263,-6.130)
C4: (60.280,-74.034,-6.708)
P: (57.675,-76.938,-11.872)
C4': (59.048,-73.352,-11.218)
C2': (61.037,-73.118,-9.926)
C2: (61.215,-73.263,-4.861)
N1: (61.037,-74.401,-4.187)
N3: (60.876,-72.972,-6.117)
N6: (60.226,-76.568,-4.156)
N7: (59.421,-76.120,-7.025)
N9: (59.796,-74.131,-7.996)
O5': (58.518,-75.665,-11.428)
O3': (61.085,-73.394,-12.411)
C4: (61.470,-69.259,-5.025)
N3: (60.547,-69.895,-5.838)
OP1: (60.964,-64.071,-3.838)
OP2: (61.734,-62.609,-5.838)
C2: (59.768,-69.320,-6.814)
C1': (59.234,-67.346,-8.100)
C3': (57.526,-65.915,-7.319)
O5': (60.031,-64.374,-6.190)
O4': (59.700,-66.019,-8.238)
C5': (59.213,-63.909,-7.280)
P: (60.665,-63.363,-5.127)
C4': (58.613,-65.092,-8.023)
C2': (57.725,-67.321,-7.870)
O2': (57.040,-67.573,-9.080)
N1: (59.964,-67.974,-6.994)
O4: (62.195,-69.935,-4.287)
O2: (58.957,-69.954,-7.470)
C6: (60.833,-67.263,-6.184)
C5: (61.566,-67.844,-5.231)
O3': (56.206,-65.479,-7.634)
Image (generated by PyMOL):
PyMOL image
show in jmol