Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A298:A563
Extra
PDB:
ATOM 1 O3' G A 297 -63.468 38.168 -55.135 1.00 15.80 O
ATOM 2 P A A 298 -62.412 37.104 -54.576 1.00 23.44 P
ATOM 3 OP1 A A 298 -61.120 37.366 -55.238 1.00 23.44 O
ATOM 4 OP2 A A 298 -63.028 35.754 -54.714 1.00 23.44 O
ATOM 5 O5' A A 298 -62.303 37.496 -53.064 1.00 23.44 O
ATOM 6 C5' A A 298 -61.051 37.505 -52.433 1.00 23.44 C
ATOM 7 C4' A A 298 -61.196 37.406 -50.945 1.00 23.44 C
ATOM 8 O4' A A 298 -62.517 37.873 -50.532 1.00 23.44 O
ATOM 9 C3' A A 298 -61.120 36.015 -50.376 1.00 23.44 C
ATOM 10 O3' A A 298 -59.806 35.530 -50.296 1.00 23.44 O
ATOM 11 C2' A A 298 -61.815 36.187 -49.033 1.00 23.44 C
ATOM 12 O2' A A 298 -60.991 36.910 -48.123 1.00 23.44 O
ATOM 13 C1' A A 298 -62.978 37.087 -49.446 1.00 23.44 C
ATOM 14 N9 A A 298 -64.138 36.307 -49.913 1.00 23.38 N
ATOM 15 C8 A A 298 -64.258 35.764 -51.162 1.00 23.38 C
ATOM 16 N7 A A 298 -65.375 35.125 -51.362 1.00 23.38 N
ATOM 17 C5 A A 298 -66.035 35.256 -50.168 1.00 23.38 C
ATOM 18 C6 A A 298 -67.275 34.772 -49.778 1.00 23.38 C
ATOM 19 N6 A A 298 -68.058 34.064 -50.598 1.00 23.38 N
ATOM 20 N1 A A 298 -67.656 35.060 -48.519 1.00 23.38 N
ATOM 21 C2 A A 298 -66.834 35.783 -47.745 1.00 23.38 C
ATOM 22 N3 A A 298 -65.642 36.291 -48.011 1.00 23.38 N
ATOM 23 C4 A A 298 -65.296 35.985 -49.259 1.00 23.38 C
ATOM 24 P G A 299 -59.534 33.989 -50.605 1.00 24.82 P
ATOM 25 OP1 G A 299 -58.072 33.812 -50.718 1.00 24.82 O
ATOM 26 OP2 G A 299 -60.396 33.614 -51.755 1.00 24.82 O
ATOM 27 O5' G A 299 -60.046 33.290 -49.285 1.00 24.82 O
TER
ATOM 1 O3' C B 562 -60.319 39.745 -40.196 1.00 20.38 O
ATOM 2 P U B 563 -61.674 40.564 -39.910 1.00 23.31 P
ATOM 3 OP1 U B 563 -61.320 41.749 -39.085 1.00 23.31 O
ATOM 4 OP2 U B 563 -62.664 39.599 -39.365 1.00 23.31 O
ATOM 5 O5' U B 563 -62.109 41.026 -41.368 1.00 23.31 O
ATOM 6 C5' U B 563 -61.255 41.829 -42.164 1.00 23.31 C
ATOM 7 C4' U B 563 -61.761 41.929 -43.581 1.00 23.31 C
ATOM 8 O4' U B 563 -61.568 40.663 -44.271 1.00 23.31 O
ATOM 9 C3' U B 563 -63.247 42.217 -43.737 1.00 23.31 C
ATOM 10 O3' U B 563 -63.548 43.583 -43.595 1.00 23.31 O
ATOM 11 C2' U B 563 -63.550 41.677 -45.122 1.00 23.31 C
ATOM 12 O2' U B 563 -63.171 42.612 -46.109 1.00 23.31 O
ATOM 13 C1' U B 563 -62.612 40.465 -45.204 1.00 23.31 C
ATOM 14 N1 U B 563 -63.310 39.195 -44.883 1.00 23.39 N
ATOM 15 C2 U B 563 -63.848 38.491 -45.944 1.00 23.39 C
ATOM 16 O2 U B 563 -63.745 38.875 -47.102 1.00 23.39 O
ATOM 17 N3 U B 563 -64.501 37.319 -45.598 1.00 23.39 N
ATOM 18 C4 U B 563 -64.671 36.775 -44.335 1.00 23.39 C
ATOM 19 O4 U B 563 -65.286 35.698 -44.193 1.00 23.39 O
ATOM 20 C5 U B 563 -64.075 37.574 -43.296 1.00 23.39 C
ATOM 21 C6 U B 563 -63.434 38.717 -43.595 1.00 23.39 C
ATOM 22 P G B 564 -64.929 44.049 -42.913 1.00 9.79 P
ATOM 23 OP1 G B 564 -66.024 43.685 -43.850 1.00 9.79 O
ATOM 24 OP2 G B 564 -64.770 45.480 -42.521 1.00 9.79 O
ATOM 25 O5' G B 564 -65.003 43.156 -41.601 1.00 9.79 O
TER
ATOM 2 P A A 298 -62.412 37.104 -54.576 1.00 23.44 P
ATOM 3 OP1 A A 298 -61.120 37.366 -55.238 1.00 23.44 O
ATOM 4 OP2 A A 298 -63.028 35.754 -54.714 1.00 23.44 O
ATOM 5 O5' A A 298 -62.303 37.496 -53.064 1.00 23.44 O
ATOM 6 C5' A A 298 -61.051 37.505 -52.433 1.00 23.44 C
ATOM 7 C4' A A 298 -61.196 37.406 -50.945 1.00 23.44 C
ATOM 8 O4' A A 298 -62.517 37.873 -50.532 1.00 23.44 O
ATOM 9 C3' A A 298 -61.120 36.015 -50.376 1.00 23.44 C
ATOM 10 O3' A A 298 -59.806 35.530 -50.296 1.00 23.44 O
ATOM 11 C2' A A 298 -61.815 36.187 -49.033 1.00 23.44 C
ATOM 12 O2' A A 298 -60.991 36.910 -48.123 1.00 23.44 O
ATOM 13 C1' A A 298 -62.978 37.087 -49.446 1.00 23.44 C
ATOM 14 N9 A A 298 -64.138 36.307 -49.913 1.00 23.38 N
ATOM 15 C8 A A 298 -64.258 35.764 -51.162 1.00 23.38 C
ATOM 16 N7 A A 298 -65.375 35.125 -51.362 1.00 23.38 N
ATOM 17 C5 A A 298 -66.035 35.256 -50.168 1.00 23.38 C
ATOM 18 C6 A A 298 -67.275 34.772 -49.778 1.00 23.38 C
ATOM 19 N6 A A 298 -68.058 34.064 -50.598 1.00 23.38 N
ATOM 20 N1 A A 298 -67.656 35.060 -48.519 1.00 23.38 N
ATOM 21 C2 A A 298 -66.834 35.783 -47.745 1.00 23.38 C
ATOM 22 N3 A A 298 -65.642 36.291 -48.011 1.00 23.38 N
ATOM 23 C4 A A 298 -65.296 35.985 -49.259 1.00 23.38 C
ATOM 24 P G A 299 -59.534 33.989 -50.605 1.00 24.82 P
ATOM 25 OP1 G A 299 -58.072 33.812 -50.718 1.00 24.82 O
ATOM 26 OP2 G A 299 -60.396 33.614 -51.755 1.00 24.82 O
ATOM 27 O5' G A 299 -60.046 33.290 -49.285 1.00 24.82 O
TER
ATOM 1 O3' C B 562 -60.319 39.745 -40.196 1.00 20.38 O
ATOM 2 P U B 563 -61.674 40.564 -39.910 1.00 23.31 P
ATOM 3 OP1 U B 563 -61.320 41.749 -39.085 1.00 23.31 O
ATOM 4 OP2 U B 563 -62.664 39.599 -39.365 1.00 23.31 O
ATOM 5 O5' U B 563 -62.109 41.026 -41.368 1.00 23.31 O
ATOM 6 C5' U B 563 -61.255 41.829 -42.164 1.00 23.31 C
ATOM 7 C4' U B 563 -61.761 41.929 -43.581 1.00 23.31 C
ATOM 8 O4' U B 563 -61.568 40.663 -44.271 1.00 23.31 O
ATOM 9 C3' U B 563 -63.247 42.217 -43.737 1.00 23.31 C
ATOM 10 O3' U B 563 -63.548 43.583 -43.595 1.00 23.31 O
ATOM 11 C2' U B 563 -63.550 41.677 -45.122 1.00 23.31 C
ATOM 12 O2' U B 563 -63.171 42.612 -46.109 1.00 23.31 O
ATOM 13 C1' U B 563 -62.612 40.465 -45.204 1.00 23.31 C
ATOM 14 N1 U B 563 -63.310 39.195 -44.883 1.00 23.39 N
ATOM 15 C2 U B 563 -63.848 38.491 -45.944 1.00 23.39 C
ATOM 16 O2 U B 563 -63.745 38.875 -47.102 1.00 23.39 O
ATOM 17 N3 U B 563 -64.501 37.319 -45.598 1.00 23.39 N
ATOM 18 C4 U B 563 -64.671 36.775 -44.335 1.00 23.39 C
ATOM 19 O4 U B 563 -65.286 35.698 -44.193 1.00 23.39 O
ATOM 20 C5 U B 563 -64.075 37.574 -43.296 1.00 23.39 C
ATOM 21 C6 U B 563 -63.434 38.717 -43.595 1.00 23.39 C
ATOM 22 P G B 564 -64.929 44.049 -42.913 1.00 9.79 P
ATOM 23 OP1 G B 564 -66.024 43.685 -43.850 1.00 9.79 O
ATOM 24 OP2 G B 564 -64.770 45.480 -42.521 1.00 9.79 O
ATOM 25 O5' G B 564 -65.003 43.156 -41.601 1.00 9.79 O
TER
Atoms:
OP1: (-61.120,37.366,-55.238)
OP2: (-63.028,35.754,-54.714)
C3': (-61.120,36.015,-50.376)
C1': (-62.978,37.087,-49.446)
C5': (-61.051,37.505,-52.433)
O4': (-62.517,37.873,-50.532)
C8: (-64.258,35.764,-51.162)
O2': (-60.991,36.910,-48.123)
C6: (-67.275,34.772,-49.778)
C5: (-66.035,35.256,-50.168)
C4: (-65.296,35.985,-49.259)
P: (-62.412,37.104,-54.576)
C4': (-61.196,37.406,-50.945)
C2': (-61.815,36.187,-49.033)
C2: (-66.834,35.783,-47.745)
N1: (-67.656,35.060,-48.519)
N3: (-65.642,36.291,-48.011)
N6: (-68.058,34.064,-50.598)
N7: (-65.375,35.125,-51.362)
N9: (-64.138,36.307,-49.913)
O5': (-62.303,37.496,-53.064)
O3': (-59.806,35.530,-50.296)
OP2: (-63.028,35.754,-54.714)
C3': (-61.120,36.015,-50.376)
C1': (-62.978,37.087,-49.446)
C5': (-61.051,37.505,-52.433)
O4': (-62.517,37.873,-50.532)
C8: (-64.258,35.764,-51.162)
O2': (-60.991,36.910,-48.123)
C6: (-67.275,34.772,-49.778)
C5: (-66.035,35.256,-50.168)
C4: (-65.296,35.985,-49.259)
P: (-62.412,37.104,-54.576)
C4': (-61.196,37.406,-50.945)
C2': (-61.815,36.187,-49.033)
C2: (-66.834,35.783,-47.745)
N1: (-67.656,35.060,-48.519)
N3: (-65.642,36.291,-48.011)
N6: (-68.058,34.064,-50.598)
N7: (-65.375,35.125,-51.362)
N9: (-64.138,36.307,-49.913)
O5': (-62.303,37.496,-53.064)
O3': (-59.806,35.530,-50.296)
C4: (-64.671,36.775,-44.335)
N3: (-64.501,37.319,-45.598)
OP1: (-61.320,41.749,-39.085)
OP2: (-62.664,39.599,-39.365)
C2: (-63.848,38.491,-45.944)
C1': (-62.612,40.465,-45.204)
C3': (-63.247,42.217,-43.737)
O5': (-62.109,41.026,-41.368)
O4': (-61.568,40.663,-44.271)
C5': (-61.255,41.829,-42.164)
P: (-61.674,40.564,-39.910)
C4': (-61.761,41.929,-43.581)
C2': (-63.550,41.677,-45.122)
O2': (-63.171,42.612,-46.109)
N1: (-63.310,39.195,-44.883)
O4: (-65.286,35.698,-44.193)
O2: (-63.745,38.875,-47.102)
C6: (-63.434,38.717,-43.595)
C5: (-64.075,37.574,-43.296)
O3': (-63.548,43.583,-43.595)
N3: (-64.501,37.319,-45.598)
OP1: (-61.320,41.749,-39.085)
OP2: (-62.664,39.599,-39.365)
C2: (-63.848,38.491,-45.944)
C1': (-62.612,40.465,-45.204)
C3': (-63.247,42.217,-43.737)
O5': (-62.109,41.026,-41.368)
O4': (-61.568,40.663,-44.271)
C5': (-61.255,41.829,-42.164)
P: (-61.674,40.564,-39.910)
C4': (-61.761,41.929,-43.581)
C2': (-63.550,41.677,-45.122)
O2': (-63.171,42.612,-46.109)
N1: (-63.310,39.195,-44.883)
O4: (-65.286,35.698,-44.193)
O2: (-63.745,38.875,-47.102)
C6: (-63.434,38.717,-43.595)
C5: (-64.075,37.574,-43.296)
O3': (-63.548,43.583,-43.595)
Image (generated by PyMOL):