Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A298:A563
Extra
PDB:
ATOM 1 O3' G A 297 -14.048 58.514 76.167 1.00 19.48 O
ATOM 2 P A A 298 -13.494 58.286 77.666 1.00 21.64 P
ATOM 3 OP1 A A 298 -12.339 57.377 77.559 1.00 21.64 O
ATOM 4 OP2 A A 298 -14.642 57.876 78.517 1.00 21.64 O
ATOM 5 O5' A A 298 -12.985 59.736 78.071 1.00 21.64 O
ATOM 6 C5' A A 298 -12.172 60.489 77.181 1.00 21.64 C
ATOM 7 C4' A A 298 -12.313 61.972 77.425 1.00 21.64 C
ATOM 8 O4' A A 298 -13.434 62.502 76.668 1.00 21.64 O
ATOM 9 C3' A A 298 -12.609 62.375 78.856 1.00 21.64 C
ATOM 10 O3' A A 298 -11.455 62.398 79.663 1.00 21.64 O
ATOM 11 C2' A A 298 -13.264 63.731 78.683 1.00 21.64 C
ATOM 12 O2' A A 298 -12.293 64.725 78.418 1.00 21.64 O
ATOM 13 C1' A A 298 -14.093 63.496 77.421 1.00 21.64 C
ATOM 14 N9 A A 298 -15.427 62.991 77.747 1.00 21.55 N
ATOM 15 C8 A A 298 -15.668 61.673 77.967 1.00 21.55 C
ATOM 16 N7 A A 298 -16.905 61.415 78.263 1.00 21.55 N
ATOM 17 C5 A A 298 -17.527 62.661 78.245 1.00 21.55 C
ATOM 18 C6 A A 298 -18.862 63.044 78.477 1.00 21.55 C
ATOM 19 N6 A A 298 -19.827 62.174 78.777 1.00 21.55 N
ATOM 20 N1 A A 298 -19.168 64.342 78.380 1.00 21.55 N
ATOM 21 C2 A A 298 -18.180 65.174 78.064 1.00 21.55 C
ATOM 22 N3 A A 298 -16.894 64.932 77.815 1.00 21.55 N
ATOM 23 C4 A A 298 -16.620 63.640 77.922 1.00 21.55 C
ATOM 24 P G A 299 -11.591 62.484 81.248 1.00 21.65 P
ATOM 25 OP1 G A 299 -10.239 62.739 81.776 1.00 21.65 O
ATOM 26 OP2 G A 299 -12.324 61.272 81.699 1.00 21.65 O
ATOM 27 O5' G A 299 -12.497 63.776 81.431 1.00 21.65 O
TER
ATOM 1 O3' C B 562 -10.552 72.088 75.024 1.00 18.49 O
ATOM 2 P U B 563 -11.725 72.648 74.111 1.00 19.80 P
ATOM 3 OP1 U B 563 -11.175 73.777 73.319 1.00 19.80 O
ATOM 4 OP2 U B 563 -12.870 72.902 75.014 1.00 19.80 O
ATOM 5 O5' U B 563 -12.052 71.421 73.161 1.00 19.80 O
ATOM 6 C5' U B 563 -11.053 70.477 72.818 1.00 19.80 C
ATOM 7 C4' U B 563 -11.660 69.132 72.521 1.00 19.80 C
ATOM 8 O4' U B 563 -11.861 68.407 73.763 1.00 19.80 O
ATOM 9 C3' U B 563 -13.029 69.161 71.867 1.00 19.80 C
ATOM 10 O3' U B 563 -12.962 69.312 70.462 1.00 19.80 O
ATOM 11 C2' U B 563 -13.653 67.845 72.301 1.00 19.80 C
ATOM 12 O2' U B 563 -13.264 66.789 71.441 1.00 19.80 O
ATOM 13 C1' U B 563 -13.026 67.619 73.681 1.00 19.80 C
ATOM 14 N1 U B 563 -13.957 67.994 74.796 1.00 19.87 N
ATOM 15 C2 U B 563 -14.733 67.000 75.363 1.00 19.87 C
ATOM 16 O2 U B 563 -14.702 65.835 75.030 1.00 19.87 O
ATOM 17 N3 U B 563 -15.576 67.394 76.345 1.00 19.87 N
ATOM 18 C4 U B 563 -15.745 68.653 76.832 1.00 19.87 C
ATOM 19 O4 U B 563 -16.558 68.819 77.743 1.00 19.87 O
ATOM 20 C5 U B 563 -14.927 69.642 76.213 1.00 19.87 C
ATOM 21 C6 U B 563 -14.086 69.285 75.242 1.00 19.87 C
ATOM 22 P G B 564 -14.283 69.725 69.630 1.00 18.97 P
ATOM 23 OP1 G B 564 -15.308 68.673 69.880 1.00 18.97 O
ATOM 24 OP2 G B 564 -13.864 69.984 68.233 1.00 18.97 O
ATOM 25 O5' G B 564 -14.716 71.093 70.340 1.00 18.97 O
TER
ATOM 2 P A A 298 -13.494 58.286 77.666 1.00 21.64 P
ATOM 3 OP1 A A 298 -12.339 57.377 77.559 1.00 21.64 O
ATOM 4 OP2 A A 298 -14.642 57.876 78.517 1.00 21.64 O
ATOM 5 O5' A A 298 -12.985 59.736 78.071 1.00 21.64 O
ATOM 6 C5' A A 298 -12.172 60.489 77.181 1.00 21.64 C
ATOM 7 C4' A A 298 -12.313 61.972 77.425 1.00 21.64 C
ATOM 8 O4' A A 298 -13.434 62.502 76.668 1.00 21.64 O
ATOM 9 C3' A A 298 -12.609 62.375 78.856 1.00 21.64 C
ATOM 10 O3' A A 298 -11.455 62.398 79.663 1.00 21.64 O
ATOM 11 C2' A A 298 -13.264 63.731 78.683 1.00 21.64 C
ATOM 12 O2' A A 298 -12.293 64.725 78.418 1.00 21.64 O
ATOM 13 C1' A A 298 -14.093 63.496 77.421 1.00 21.64 C
ATOM 14 N9 A A 298 -15.427 62.991 77.747 1.00 21.55 N
ATOM 15 C8 A A 298 -15.668 61.673 77.967 1.00 21.55 C
ATOM 16 N7 A A 298 -16.905 61.415 78.263 1.00 21.55 N
ATOM 17 C5 A A 298 -17.527 62.661 78.245 1.00 21.55 C
ATOM 18 C6 A A 298 -18.862 63.044 78.477 1.00 21.55 C
ATOM 19 N6 A A 298 -19.827 62.174 78.777 1.00 21.55 N
ATOM 20 N1 A A 298 -19.168 64.342 78.380 1.00 21.55 N
ATOM 21 C2 A A 298 -18.180 65.174 78.064 1.00 21.55 C
ATOM 22 N3 A A 298 -16.894 64.932 77.815 1.00 21.55 N
ATOM 23 C4 A A 298 -16.620 63.640 77.922 1.00 21.55 C
ATOM 24 P G A 299 -11.591 62.484 81.248 1.00 21.65 P
ATOM 25 OP1 G A 299 -10.239 62.739 81.776 1.00 21.65 O
ATOM 26 OP2 G A 299 -12.324 61.272 81.699 1.00 21.65 O
ATOM 27 O5' G A 299 -12.497 63.776 81.431 1.00 21.65 O
TER
ATOM 1 O3' C B 562 -10.552 72.088 75.024 1.00 18.49 O
ATOM 2 P U B 563 -11.725 72.648 74.111 1.00 19.80 P
ATOM 3 OP1 U B 563 -11.175 73.777 73.319 1.00 19.80 O
ATOM 4 OP2 U B 563 -12.870 72.902 75.014 1.00 19.80 O
ATOM 5 O5' U B 563 -12.052 71.421 73.161 1.00 19.80 O
ATOM 6 C5' U B 563 -11.053 70.477 72.818 1.00 19.80 C
ATOM 7 C4' U B 563 -11.660 69.132 72.521 1.00 19.80 C
ATOM 8 O4' U B 563 -11.861 68.407 73.763 1.00 19.80 O
ATOM 9 C3' U B 563 -13.029 69.161 71.867 1.00 19.80 C
ATOM 10 O3' U B 563 -12.962 69.312 70.462 1.00 19.80 O
ATOM 11 C2' U B 563 -13.653 67.845 72.301 1.00 19.80 C
ATOM 12 O2' U B 563 -13.264 66.789 71.441 1.00 19.80 O
ATOM 13 C1' U B 563 -13.026 67.619 73.681 1.00 19.80 C
ATOM 14 N1 U B 563 -13.957 67.994 74.796 1.00 19.87 N
ATOM 15 C2 U B 563 -14.733 67.000 75.363 1.00 19.87 C
ATOM 16 O2 U B 563 -14.702 65.835 75.030 1.00 19.87 O
ATOM 17 N3 U B 563 -15.576 67.394 76.345 1.00 19.87 N
ATOM 18 C4 U B 563 -15.745 68.653 76.832 1.00 19.87 C
ATOM 19 O4 U B 563 -16.558 68.819 77.743 1.00 19.87 O
ATOM 20 C5 U B 563 -14.927 69.642 76.213 1.00 19.87 C
ATOM 21 C6 U B 563 -14.086 69.285 75.242 1.00 19.87 C
ATOM 22 P G B 564 -14.283 69.725 69.630 1.00 18.97 P
ATOM 23 OP1 G B 564 -15.308 68.673 69.880 1.00 18.97 O
ATOM 24 OP2 G B 564 -13.864 69.984 68.233 1.00 18.97 O
ATOM 25 O5' G B 564 -14.716 71.093 70.340 1.00 18.97 O
TER
Atoms:
OP1: (-12.339,57.377,77.559)
OP2: (-14.642,57.876,78.517)
C3': (-12.609,62.375,78.856)
C1': (-14.093,63.496,77.421)
C5': (-12.172,60.489,77.181)
O4': (-13.434,62.502,76.668)
C8: (-15.668,61.673,77.967)
O2': (-12.293,64.725,78.418)
C6: (-18.862,63.044,78.477)
C5: (-17.527,62.661,78.245)
C4: (-16.620,63.640,77.922)
P: (-13.494,58.286,77.666)
C4': (-12.313,61.972,77.425)
C2': (-13.264,63.731,78.683)
C2: (-18.180,65.174,78.064)
N1: (-19.168,64.342,78.380)
N3: (-16.894,64.932,77.815)
N6: (-19.827,62.174,78.777)
N7: (-16.905,61.415,78.263)
N9: (-15.427,62.991,77.747)
O5': (-12.985,59.736,78.071)
O3': (-11.455,62.398,79.663)
OP2: (-14.642,57.876,78.517)
C3': (-12.609,62.375,78.856)
C1': (-14.093,63.496,77.421)
C5': (-12.172,60.489,77.181)
O4': (-13.434,62.502,76.668)
C8: (-15.668,61.673,77.967)
O2': (-12.293,64.725,78.418)
C6: (-18.862,63.044,78.477)
C5: (-17.527,62.661,78.245)
C4: (-16.620,63.640,77.922)
P: (-13.494,58.286,77.666)
C4': (-12.313,61.972,77.425)
C2': (-13.264,63.731,78.683)
C2: (-18.180,65.174,78.064)
N1: (-19.168,64.342,78.380)
N3: (-16.894,64.932,77.815)
N6: (-19.827,62.174,78.777)
N7: (-16.905,61.415,78.263)
N9: (-15.427,62.991,77.747)
O5': (-12.985,59.736,78.071)
O3': (-11.455,62.398,79.663)
C4: (-15.745,68.653,76.832)
N3: (-15.576,67.394,76.345)
OP1: (-11.175,73.777,73.319)
OP2: (-12.870,72.902,75.014)
C2: (-14.733,67.000,75.363)
C1': (-13.026,67.619,73.681)
C3': (-13.029,69.161,71.867)
O5': (-12.052,71.421,73.161)
O4': (-11.861,68.407,73.763)
C5': (-11.053,70.477,72.818)
P: (-11.725,72.648,74.111)
C4': (-11.660,69.132,72.521)
C2': (-13.653,67.845,72.301)
O2': (-13.264,66.789,71.441)
N1: (-13.957,67.994,74.796)
O4: (-16.558,68.819,77.743)
O2: (-14.702,65.835,75.030)
C6: (-14.086,69.285,75.242)
C5: (-14.927,69.642,76.213)
O3': (-12.962,69.312,70.462)
N3: (-15.576,67.394,76.345)
OP1: (-11.175,73.777,73.319)
OP2: (-12.870,72.902,75.014)
C2: (-14.733,67.000,75.363)
C1': (-13.026,67.619,73.681)
C3': (-13.029,69.161,71.867)
O5': (-12.052,71.421,73.161)
O4': (-11.861,68.407,73.763)
C5': (-11.053,70.477,72.818)
P: (-11.725,72.648,74.111)
C4': (-11.660,69.132,72.521)
C2': (-13.653,67.845,72.301)
O2': (-13.264,66.789,71.441)
N1: (-13.957,67.994,74.796)
O4: (-16.558,68.819,77.743)
O2: (-14.702,65.835,75.030)
C6: (-14.086,69.285,75.242)
C5: (-14.927,69.642,76.213)
O3': (-12.962,69.312,70.462)
Image (generated by PyMOL):