Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A321:A338
Extra
PDB:
ATOM 1 O3' U A 320 -49.617-104.191 74.414 1.00 0.01 O
ATOM 2 P A A 321 -50.126-104.668 72.976 1.00 1.99 P
ATOM 3 OP1 A A 321 -51.203-103.752 72.571 1.00 1.99 O
ATOM 4 OP2 A A 321 -50.422-106.127 73.060 1.00 1.99 O
ATOM 5 O5' A A 321 -48.863-104.402 72.069 1.00 1.99 O
ATOM 6 C5' A A 321 -48.527-103.072 71.696 1.00 1.99 C
ATOM 7 C4' A A 321 -47.438-103.043 70.664 1.00 1.99 C
ATOM 8 O4' A A 321 -46.179-103.394 71.306 1.00 1.99 O
ATOM 9 C3' A A 321 -47.613-104.038 69.524 1.00 1.99 C
ATOM 10 O3' A A 321 -47.017-103.510 68.323 1.00 1.99 O
ATOM 11 C2' A A 321 -46.817-105.240 70.044 1.00 1.99 C
ATOM 12 O2' A A 321 -46.408-106.158 69.067 1.00 1.99 O
ATOM 13 C1' A A 321 -45.638-104.540 70.687 1.00 1.99 C
ATOM 14 N9 A A 321 -44.958-105.308 71.705 1.00 1.89 N
ATOM 15 C8 A A 321 -45.443-106.138 72.672 1.00 1.89 C
ATOM 16 N7 A A 321 -44.479-106.621 73.442 1.00 1.89 N
ATOM 17 C5 A A 321 -43.296-106.045 72.956 1.00 1.89 C
ATOM 18 C6 A A 321 -41.927-106.124 73.310 1.00 1.89 C
ATOM 19 N6 A A 321 -41.380-106.835 74.290 1.00 1.89 N
ATOM 20 N1 A A 321 -41.073-105.412 72.569 1.00 1.89 N
ATOM 21 C2 A A 321 -41.538-104.673 71.559 1.00 1.89 C
ATOM 22 N3 A A 321 -42.780-104.509 71.125 1.00 1.89 N
ATOM 23 C4 A A 321 -43.611-105.228 71.878 1.00 1.89 C
ATOM 24 P C A 322 -47.932-102.760 67.218 1.00 0.01 P
ATOM 25 OP1 C A 322 -47.179-102.736 65.965 1.00 0.01 O
ATOM 26 OP2 C A 322 -48.353-101.487 67.798 1.00 0.01 O
ATOM 27 O5' C A 322 -49.176-103.732 67.062 1.00 0.01 O
TER
ATOM 1 O3' G B 337 -40.383 -96.279 66.707 1.00 0.01 O
ATOM 2 P U B 338 -41.265 -96.051 68.039 1.00 0.12 P
ATOM 3 OP1 U B 338 -41.775 -94.665 67.953 1.00 0.12 O
ATOM 4 OP2 U B 338 -40.435 -96.437 69.202 1.00 0.12 O
ATOM 5 O5' U B 338 -42.472 -97.067 67.881 1.00 0.12 O
ATOM 6 C5' U B 338 -43.715 -96.635 67.359 1.00 0.12 C
ATOM 7 C4' U B 338 -44.761 -97.712 67.453 1.00 0.12 C
ATOM 8 O4' U B 338 -44.274 -98.919 66.809 1.00 0.12 O
ATOM 9 C3' U B 338 -45.123 -98.149 68.866 1.00 0.12 C
ATOM 10 O3' U B 338 -46.093 -97.310 69.474 1.00 0.12 O
ATOM 11 C2' U B 338 -45.588 -99.584 68.660 1.00 0.12 C
ATOM 12 O2' U B 338 -46.907 -99.631 68.153 1.00 0.12 O
ATOM 13 C1' U B 338 -44.637-100.045 67.566 1.00 0.12 C
ATOM 14 N1 U B 338 -43.434-100.621 68.133 1.00 0.01 N
ATOM 15 C2 U B 338 -43.663-101.831 68.724 1.00 0.01 C
ATOM 16 O2 U B 338 -44.783-102.349 68.727 1.00 0.01 O
ATOM 17 N3 U B 338 -42.532-102.383 69.275 1.00 0.01 N
ATOM 18 C4 U B 338 -41.271-101.849 69.289 1.00 0.01 C
ATOM 19 O4 U B 338 -40.375-102.483 69.819 1.00 0.01 O
ATOM 20 C5 U B 338 -41.138-100.581 68.661 1.00 0.01 C
ATOM 21 C6 U B 338 -42.211-100.019 68.114 1.00 0.01 C
ATOM 22 P A B 339 -45.740 -96.484 70.818 1.00 1.35 P
ATOM 23 OP1 A B 339 -46.131 -95.077 70.579 1.00 1.35 O
ATOM 24 OP2 A B 339 -44.338 -96.764 71.168 1.00 1.35 O
ATOM 25 O5' A B 339 -46.697 -97.155 71.896 1.00 1.35 O
TER
ATOM 2 P A A 321 -50.126-104.668 72.976 1.00 1.99 P
ATOM 3 OP1 A A 321 -51.203-103.752 72.571 1.00 1.99 O
ATOM 4 OP2 A A 321 -50.422-106.127 73.060 1.00 1.99 O
ATOM 5 O5' A A 321 -48.863-104.402 72.069 1.00 1.99 O
ATOM 6 C5' A A 321 -48.527-103.072 71.696 1.00 1.99 C
ATOM 7 C4' A A 321 -47.438-103.043 70.664 1.00 1.99 C
ATOM 8 O4' A A 321 -46.179-103.394 71.306 1.00 1.99 O
ATOM 9 C3' A A 321 -47.613-104.038 69.524 1.00 1.99 C
ATOM 10 O3' A A 321 -47.017-103.510 68.323 1.00 1.99 O
ATOM 11 C2' A A 321 -46.817-105.240 70.044 1.00 1.99 C
ATOM 12 O2' A A 321 -46.408-106.158 69.067 1.00 1.99 O
ATOM 13 C1' A A 321 -45.638-104.540 70.687 1.00 1.99 C
ATOM 14 N9 A A 321 -44.958-105.308 71.705 1.00 1.89 N
ATOM 15 C8 A A 321 -45.443-106.138 72.672 1.00 1.89 C
ATOM 16 N7 A A 321 -44.479-106.621 73.442 1.00 1.89 N
ATOM 17 C5 A A 321 -43.296-106.045 72.956 1.00 1.89 C
ATOM 18 C6 A A 321 -41.927-106.124 73.310 1.00 1.89 C
ATOM 19 N6 A A 321 -41.380-106.835 74.290 1.00 1.89 N
ATOM 20 N1 A A 321 -41.073-105.412 72.569 1.00 1.89 N
ATOM 21 C2 A A 321 -41.538-104.673 71.559 1.00 1.89 C
ATOM 22 N3 A A 321 -42.780-104.509 71.125 1.00 1.89 N
ATOM 23 C4 A A 321 -43.611-105.228 71.878 1.00 1.89 C
ATOM 24 P C A 322 -47.932-102.760 67.218 1.00 0.01 P
ATOM 25 OP1 C A 322 -47.179-102.736 65.965 1.00 0.01 O
ATOM 26 OP2 C A 322 -48.353-101.487 67.798 1.00 0.01 O
ATOM 27 O5' C A 322 -49.176-103.732 67.062 1.00 0.01 O
TER
ATOM 1 O3' G B 337 -40.383 -96.279 66.707 1.00 0.01 O
ATOM 2 P U B 338 -41.265 -96.051 68.039 1.00 0.12 P
ATOM 3 OP1 U B 338 -41.775 -94.665 67.953 1.00 0.12 O
ATOM 4 OP2 U B 338 -40.435 -96.437 69.202 1.00 0.12 O
ATOM 5 O5' U B 338 -42.472 -97.067 67.881 1.00 0.12 O
ATOM 6 C5' U B 338 -43.715 -96.635 67.359 1.00 0.12 C
ATOM 7 C4' U B 338 -44.761 -97.712 67.453 1.00 0.12 C
ATOM 8 O4' U B 338 -44.274 -98.919 66.809 1.00 0.12 O
ATOM 9 C3' U B 338 -45.123 -98.149 68.866 1.00 0.12 C
ATOM 10 O3' U B 338 -46.093 -97.310 69.474 1.00 0.12 O
ATOM 11 C2' U B 338 -45.588 -99.584 68.660 1.00 0.12 C
ATOM 12 O2' U B 338 -46.907 -99.631 68.153 1.00 0.12 O
ATOM 13 C1' U B 338 -44.637-100.045 67.566 1.00 0.12 C
ATOM 14 N1 U B 338 -43.434-100.621 68.133 1.00 0.01 N
ATOM 15 C2 U B 338 -43.663-101.831 68.724 1.00 0.01 C
ATOM 16 O2 U B 338 -44.783-102.349 68.727 1.00 0.01 O
ATOM 17 N3 U B 338 -42.532-102.383 69.275 1.00 0.01 N
ATOM 18 C4 U B 338 -41.271-101.849 69.289 1.00 0.01 C
ATOM 19 O4 U B 338 -40.375-102.483 69.819 1.00 0.01 O
ATOM 20 C5 U B 338 -41.138-100.581 68.661 1.00 0.01 C
ATOM 21 C6 U B 338 -42.211-100.019 68.114 1.00 0.01 C
ATOM 22 P A B 339 -45.740 -96.484 70.818 1.00 1.35 P
ATOM 23 OP1 A B 339 -46.131 -95.077 70.579 1.00 1.35 O
ATOM 24 OP2 A B 339 -44.338 -96.764 71.168 1.00 1.35 O
ATOM 25 O5' A B 339 -46.697 -97.155 71.896 1.00 1.35 O
TER
Atoms:
OP1: (-51.203,-103.752,72.571)
OP2: (-50.422,-106.127,73.060)
C3': (-47.613,-104.038,69.524)
C1': (-45.638,-104.540,70.687)
C5': (-48.527,-103.072,71.696)
O4': (-46.179,-103.394,71.306)
C8: (-45.443,-106.138,72.672)
O2': (-46.408,-106.158,69.067)
C6: (-41.927,-106.124,73.310)
C5: (-43.296,-106.045,72.956)
C4: (-43.611,-105.228,71.878)
P: (-50.126,-104.668,72.976)
C4': (-47.438,-103.043,70.664)
C2': (-46.817,-105.240,70.044)
C2: (-41.538,-104.673,71.559)
N1: (-41.073,-105.412,72.569)
N3: (-42.780,-104.509,71.125)
N6: (-41.380,-106.835,74.290)
N7: (-44.479,-106.621,73.442)
N9: (-44.958,-105.308,71.705)
O5': (-48.863,-104.402,72.069)
O3': (-47.017,-103.510,68.323)
OP2: (-50.422,-106.127,73.060)
C3': (-47.613,-104.038,69.524)
C1': (-45.638,-104.540,70.687)
C5': (-48.527,-103.072,71.696)
O4': (-46.179,-103.394,71.306)
C8: (-45.443,-106.138,72.672)
O2': (-46.408,-106.158,69.067)
C6: (-41.927,-106.124,73.310)
C5: (-43.296,-106.045,72.956)
C4: (-43.611,-105.228,71.878)
P: (-50.126,-104.668,72.976)
C4': (-47.438,-103.043,70.664)
C2': (-46.817,-105.240,70.044)
C2: (-41.538,-104.673,71.559)
N1: (-41.073,-105.412,72.569)
N3: (-42.780,-104.509,71.125)
N6: (-41.380,-106.835,74.290)
N7: (-44.479,-106.621,73.442)
N9: (-44.958,-105.308,71.705)
O5': (-48.863,-104.402,72.069)
O3': (-47.017,-103.510,68.323)
C4: (-41.271,-101.849,69.289)
N3: (-42.532,-102.383,69.275)
OP1: (-41.775,-94.665,67.953)
OP2: (-40.435,-96.437,69.202)
C2: (-43.663,-101.831,68.724)
C1': (-44.637,-100.045,67.566)
C3': (-45.123,-98.149,68.866)
O5': (-42.472,-97.067,67.881)
O4': (-44.274,-98.919,66.809)
C5': (-43.715,-96.635,67.359)
P: (-41.265,-96.051,68.039)
C4': (-44.761,-97.712,67.453)
C2': (-45.588,-99.584,68.660)
O2': (-46.907,-99.631,68.153)
N1: (-43.434,-100.621,68.133)
O4: (-40.375,-102.483,69.819)
O2: (-44.783,-102.349,68.727)
C6: (-42.211,-100.019,68.114)
C5: (-41.138,-100.581,68.661)
O3': (-46.093,-97.310,69.474)
N3: (-42.532,-102.383,69.275)
OP1: (-41.775,-94.665,67.953)
OP2: (-40.435,-96.437,69.202)
C2: (-43.663,-101.831,68.724)
C1': (-44.637,-100.045,67.566)
C3': (-45.123,-98.149,68.866)
O5': (-42.472,-97.067,67.881)
O4': (-44.274,-98.919,66.809)
C5': (-43.715,-96.635,67.359)
P: (-41.265,-96.051,68.039)
C4': (-44.761,-97.712,67.453)
C2': (-45.588,-99.584,68.660)
O2': (-46.907,-99.631,68.153)
N1: (-43.434,-100.621,68.133)
O4: (-40.375,-102.483,69.819)
O2: (-44.783,-102.349,68.727)
C6: (-42.211,-100.019,68.114)
C5: (-41.138,-100.581,68.661)
O3': (-46.093,-97.310,69.474)
Image (generated by PyMOL):