Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A61:A34
Extra
PDB:
ATOM 1 O3' U A 60 10.806 -31.015 -10.516 1.00 58.31 O
ATOM 2 P A A 61 11.447 -31.725 -9.220 1.00 53.07 P
ATOM 3 OP1 A A 61 11.047 -33.150 -9.260 1.00 39.33 O
ATOM 4 OP2 A A 61 11.062 -30.911 -8.042 1.00 53.89 O
ATOM 5 O5' A A 61 13.015 -31.597 -9.480 1.00 52.47 O
ATOM 6 C5' A A 61 13.689 -32.495 -10.352 1.00 49.82 C
ATOM 7 C4' A A 61 15.187 -32.363 -10.229 1.00 47.03 C
ATOM 8 O4' A A 61 15.598 -31.038 -10.654 1.00 49.46 O
ATOM 9 C3' A A 61 15.751 -32.498 -8.822 1.00 51.42 C
ATOM 10 O3' A A 61 15.938 -33.846 -8.432 1.00 55.74 O
ATOM 11 C2' A A 61 17.044 -31.698 -8.895 1.00 50.43 C
ATOM 12 O2' A A 61 18.069 -32.453 -9.524 1.00 49.87 O
ATOM 13 C1' A A 61 16.639 -30.562 -9.830 1.00 46.05 C
ATOM 14 N9 A A 61 16.140 -29.392 -9.090 1.00 47.37 N
ATOM 15 C8 A A 61 14.836 -29.111 -8.770 1.00 46.81 C
ATOM 16 N7 A A 61 14.685 -27.992 -8.108 1.00 46.61 N
ATOM 17 C5 A A 61 15.979 -27.508 -7.987 1.00 43.73 C
ATOM 18 C6 A A 61 16.500 -26.353 -7.387 1.00 44.34 C
ATOM 19 N6 A A 61 15.747 -25.442 -6.769 1.00 42.18 N
ATOM 20 N1 A A 61 17.836 -26.165 -7.442 1.00 45.26 N
ATOM 21 C2 A A 61 18.593 -27.079 -8.061 1.00 47.45 C
ATOM 22 N3 A A 61 18.219 -28.204 -8.663 1.00 47.92 N
ATOM 23 C4 A A 61 16.887 -28.358 -8.589 1.00 45.60 C
ATOM 24 P U A 62 15.705 -34.283 -6.906 1.00 55.22 P
ATOM 25 OP1 U A 62 15.615 -35.762 -6.885 1.00 66.25 O
ATOM 26 OP2 U A 62 14.560 -33.495 -6.399 1.00 49.14 O
ATOM 27 O5' U A 62 17.049 -33.810 -6.191 1.00 53.70 O
TER
ATOM 1 O3' U B 33 26.841 -32.130 -13.730 1.00 74.47 O
ATOM 2 P U B 34 25.969 -31.630 -14.987 1.00 74.86 P
ATOM 3 OP1 U B 34 26.094 -32.666 -16.041 1.00 65.77 O
ATOM 4 OP2 U B 34 26.403 -30.248 -15.297 1.00 65.97 O
ATOM 5 O5' U B 34 24.481 -31.624 -14.414 1.00 65.85 O
ATOM 6 C5' U B 34 23.815 -32.849 -14.120 1.00 64.22 C
ATOM 7 C4' U B 34 22.310 -32.711 -14.177 1.00 59.37 C
ATOM 8 O4' U B 34 21.829 -32.131 -12.934 1.00 56.39 O
ATOM 9 C3' U B 34 21.763 -31.831 -15.304 1.00 56.95 C
ATOM 10 O3' U B 34 20.539 -32.391 -15.782 1.00 54.28 O
ATOM 11 C2' U B 34 21.470 -30.514 -14.590 1.00 50.74 C
ATOM 12 O2' U B 34 20.482 -29.718 -15.210 1.00 50.22 O
ATOM 13 C1' U B 34 21.017 -31.011 -13.221 1.00 50.03 C
ATOM 14 N1 U B 34 21.177 -30.028 -12.129 1.00 50.14 N
ATOM 15 C2 U B 34 20.210 -30.052 -11.145 1.00 50.55 C
ATOM 16 O2 U B 34 19.279 -30.836 -11.159 1.00 52.68 O
ATOM 17 N3 U B 34 20.373 -29.134 -10.142 1.00 50.47 N
ATOM 18 C4 U B 34 21.387 -28.207 -10.030 1.00 53.25 C
ATOM 19 O4 U B 34 21.397 -27.442 -9.064 1.00 50.61 O
ATOM 20 C5 U B 34 22.348 -28.243 -11.090 1.00 52.38 C
ATOM 21 C6 U B 34 22.215 -29.129 -12.084 1.00 52.32 C
ATOM 22 P C B 35 20.153 -32.298 -17.341 1.00 61.95 P
ATOM 23 OP1 C B 35 21.014 -33.267 -18.066 1.00 60.88 O
ATOM 24 OP2 C B 35 20.216 -30.865 -17.721 1.00 59.17 O
ATOM 25 O5' C B 35 18.639 -32.798 -17.359 1.00 54.57 O
TER
ATOM 2 P A A 61 11.447 -31.725 -9.220 1.00 53.07 P
ATOM 3 OP1 A A 61 11.047 -33.150 -9.260 1.00 39.33 O
ATOM 4 OP2 A A 61 11.062 -30.911 -8.042 1.00 53.89 O
ATOM 5 O5' A A 61 13.015 -31.597 -9.480 1.00 52.47 O
ATOM 6 C5' A A 61 13.689 -32.495 -10.352 1.00 49.82 C
ATOM 7 C4' A A 61 15.187 -32.363 -10.229 1.00 47.03 C
ATOM 8 O4' A A 61 15.598 -31.038 -10.654 1.00 49.46 O
ATOM 9 C3' A A 61 15.751 -32.498 -8.822 1.00 51.42 C
ATOM 10 O3' A A 61 15.938 -33.846 -8.432 1.00 55.74 O
ATOM 11 C2' A A 61 17.044 -31.698 -8.895 1.00 50.43 C
ATOM 12 O2' A A 61 18.069 -32.453 -9.524 1.00 49.87 O
ATOM 13 C1' A A 61 16.639 -30.562 -9.830 1.00 46.05 C
ATOM 14 N9 A A 61 16.140 -29.392 -9.090 1.00 47.37 N
ATOM 15 C8 A A 61 14.836 -29.111 -8.770 1.00 46.81 C
ATOM 16 N7 A A 61 14.685 -27.992 -8.108 1.00 46.61 N
ATOM 17 C5 A A 61 15.979 -27.508 -7.987 1.00 43.73 C
ATOM 18 C6 A A 61 16.500 -26.353 -7.387 1.00 44.34 C
ATOM 19 N6 A A 61 15.747 -25.442 -6.769 1.00 42.18 N
ATOM 20 N1 A A 61 17.836 -26.165 -7.442 1.00 45.26 N
ATOM 21 C2 A A 61 18.593 -27.079 -8.061 1.00 47.45 C
ATOM 22 N3 A A 61 18.219 -28.204 -8.663 1.00 47.92 N
ATOM 23 C4 A A 61 16.887 -28.358 -8.589 1.00 45.60 C
ATOM 24 P U A 62 15.705 -34.283 -6.906 1.00 55.22 P
ATOM 25 OP1 U A 62 15.615 -35.762 -6.885 1.00 66.25 O
ATOM 26 OP2 U A 62 14.560 -33.495 -6.399 1.00 49.14 O
ATOM 27 O5' U A 62 17.049 -33.810 -6.191 1.00 53.70 O
TER
ATOM 1 O3' U B 33 26.841 -32.130 -13.730 1.00 74.47 O
ATOM 2 P U B 34 25.969 -31.630 -14.987 1.00 74.86 P
ATOM 3 OP1 U B 34 26.094 -32.666 -16.041 1.00 65.77 O
ATOM 4 OP2 U B 34 26.403 -30.248 -15.297 1.00 65.97 O
ATOM 5 O5' U B 34 24.481 -31.624 -14.414 1.00 65.85 O
ATOM 6 C5' U B 34 23.815 -32.849 -14.120 1.00 64.22 C
ATOM 7 C4' U B 34 22.310 -32.711 -14.177 1.00 59.37 C
ATOM 8 O4' U B 34 21.829 -32.131 -12.934 1.00 56.39 O
ATOM 9 C3' U B 34 21.763 -31.831 -15.304 1.00 56.95 C
ATOM 10 O3' U B 34 20.539 -32.391 -15.782 1.00 54.28 O
ATOM 11 C2' U B 34 21.470 -30.514 -14.590 1.00 50.74 C
ATOM 12 O2' U B 34 20.482 -29.718 -15.210 1.00 50.22 O
ATOM 13 C1' U B 34 21.017 -31.011 -13.221 1.00 50.03 C
ATOM 14 N1 U B 34 21.177 -30.028 -12.129 1.00 50.14 N
ATOM 15 C2 U B 34 20.210 -30.052 -11.145 1.00 50.55 C
ATOM 16 O2 U B 34 19.279 -30.836 -11.159 1.00 52.68 O
ATOM 17 N3 U B 34 20.373 -29.134 -10.142 1.00 50.47 N
ATOM 18 C4 U B 34 21.387 -28.207 -10.030 1.00 53.25 C
ATOM 19 O4 U B 34 21.397 -27.442 -9.064 1.00 50.61 O
ATOM 20 C5 U B 34 22.348 -28.243 -11.090 1.00 52.38 C
ATOM 21 C6 U B 34 22.215 -29.129 -12.084 1.00 52.32 C
ATOM 22 P C B 35 20.153 -32.298 -17.341 1.00 61.95 P
ATOM 23 OP1 C B 35 21.014 -33.267 -18.066 1.00 60.88 O
ATOM 24 OP2 C B 35 20.216 -30.865 -17.721 1.00 59.17 O
ATOM 25 O5' C B 35 18.639 -32.798 -17.359 1.00 54.57 O
TER
Atoms:
OP1: (11.047,-33.150,-9.260)
OP2: (11.062,-30.911,-8.042)
C3': (15.751,-32.498,-8.822)
C1': (16.639,-30.562,-9.830)
C5': (13.689,-32.495,-10.352)
O4': (15.598,-31.038,-10.654)
C8: (14.836,-29.111,-8.770)
O2': (18.069,-32.453,-9.524)
C6: (16.500,-26.353,-7.387)
C5: (15.979,-27.508,-7.987)
C4: (16.887,-28.358,-8.589)
P: (11.447,-31.725,-9.220)
C4': (15.187,-32.363,-10.229)
C2': (17.044,-31.698,-8.895)
C2: (18.593,-27.079,-8.061)
N1: (17.836,-26.165,-7.442)
N3: (18.219,-28.204,-8.663)
N6: (15.747,-25.442,-6.769)
N7: (14.685,-27.992,-8.108)
N9: (16.140,-29.392,-9.090)
O5': (13.015,-31.597,-9.480)
O3': (15.938,-33.846,-8.432)
OP2: (11.062,-30.911,-8.042)
C3': (15.751,-32.498,-8.822)
C1': (16.639,-30.562,-9.830)
C5': (13.689,-32.495,-10.352)
O4': (15.598,-31.038,-10.654)
C8: (14.836,-29.111,-8.770)
O2': (18.069,-32.453,-9.524)
C6: (16.500,-26.353,-7.387)
C5: (15.979,-27.508,-7.987)
C4: (16.887,-28.358,-8.589)
P: (11.447,-31.725,-9.220)
C4': (15.187,-32.363,-10.229)
C2': (17.044,-31.698,-8.895)
C2: (18.593,-27.079,-8.061)
N1: (17.836,-26.165,-7.442)
N3: (18.219,-28.204,-8.663)
N6: (15.747,-25.442,-6.769)
N7: (14.685,-27.992,-8.108)
N9: (16.140,-29.392,-9.090)
O5': (13.015,-31.597,-9.480)
O3': (15.938,-33.846,-8.432)
C4: (21.387,-28.207,-10.030)
N3: (20.373,-29.134,-10.142)
OP1: (26.094,-32.666,-16.041)
OP2: (26.403,-30.248,-15.297)
C2: (20.210,-30.052,-11.145)
C1': (21.017,-31.011,-13.221)
C3': (21.763,-31.831,-15.304)
O5': (24.481,-31.624,-14.414)
O4': (21.829,-32.131,-12.934)
C5': (23.815,-32.849,-14.120)
P: (25.969,-31.630,-14.987)
C4': (22.310,-32.711,-14.177)
C2': (21.470,-30.514,-14.590)
O2': (20.482,-29.718,-15.210)
N1: (21.177,-30.028,-12.129)
O4: (21.397,-27.442,-9.064)
O2: (19.279,-30.836,-11.159)
C6: (22.215,-29.129,-12.084)
C5: (22.348,-28.243,-11.090)
O3': (20.539,-32.391,-15.782)
N3: (20.373,-29.134,-10.142)
OP1: (26.094,-32.666,-16.041)
OP2: (26.403,-30.248,-15.297)
C2: (20.210,-30.052,-11.145)
C1': (21.017,-31.011,-13.221)
C3': (21.763,-31.831,-15.304)
O5': (24.481,-31.624,-14.414)
O4': (21.829,-32.131,-12.934)
C5': (23.815,-32.849,-14.120)
P: (25.969,-31.630,-14.987)
C4': (22.310,-32.711,-14.177)
C2': (21.470,-30.514,-14.590)
O2': (20.482,-29.718,-15.210)
N1: (21.177,-30.028,-12.129)
O4: (21.397,-27.442,-9.064)
O2: (19.279,-30.836,-11.159)
C6: (22.215,-29.129,-12.084)
C5: (22.348,-28.243,-11.090)
O3': (20.539,-32.391,-15.782)
Image (generated by PyMOL):