Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12537:1302
Extra
PDB:
ATOM 1 O3' G A2536 30.124 -61.018 98.217 1.00 50.20 O
ATOM 2 P A A2537 30.429 -60.808 96.649 1.00 45.94 P
ATOM 3 OP1 A A2537 29.330 -59.934 96.108 1.00 45.60 O
ATOM 4 OP2 A A2537 30.641 -62.148 96.074 1.00 46.27 O
ATOM 5 O5' A A2537 31.796 -60.017 96.626 1.00 45.68 O
ATOM 6 C5' A A2537 31.942 -58.797 97.317 1.00 45.43 C
ATOM 7 C4' A A2537 33.388 -58.458 97.473 1.00 45.35 C
ATOM 8 O4' A A2537 34.058 -59.504 98.249 1.00 45.81 O
ATOM 9 C3' A A2537 34.184 -58.427 96.188 1.00 45.11 C
ATOM 10 O3' A A2537 33.977 -57.265 95.412 1.00 44.64 O
ATOM 11 C2' A A2537 35.594 -58.590 96.706 1.00 45.26 C
ATOM 12 O2' A A2537 36.024 -57.401 97.335 1.00 45.02 O
ATOM 13 C1' A A2537 35.384 -59.649 97.787 1.00 45.77 C
ATOM 14 N9 A A2537 35.564 -60.992 97.231 1.00 46.09 N
ATOM 15 C8 A A2537 34.664 -61.939 96.895 1.00 46.33 C
ATOM 16 N7 A A2537 35.210 -62.980 96.323 1.00 46.57 N
ATOM 17 C5 A A2537 36.550 -62.691 96.268 1.00 46.48 C
ATOM 18 C6 A A2537 37.660 -63.402 95.795 1.00 46.65 C
ATOM 19 N6 A A2537 37.604 -64.614 95.257 1.00 46.97 N
ATOM 20 N1 A A2537 38.865 -62.795 95.889 1.00 46.49 N
ATOM 21 C2 A A2537 38.961 -61.578 96.438 1.00 46.20 C
ATOM 22 N3 A A2537 37.989 -60.825 96.940 1.00 46.02 N
ATOM 23 C4 A A2537 36.785 -61.449 96.811 1.00 46.18 C
ATOM 24 P G A2538 34.043 -57.352 93.805 1.00 47.55 P
ATOM 25 OP1 G A2538 33.533 -56.059 93.260 1.00 47.09 O
ATOM 26 OP2 G A2538 33.399 -58.586 93.396 1.00 47.85 O
ATOM 27 O5' G A2538 35.576 -57.483 93.527 1.00 47.55 O
TER
ATOM 1 O3' G B 301 44.798 -54.977 104.282 1.00 47.25 O
ATOM 2 P U B 302 44.117 -56.347 103.843 1.00 44.89 P
ATOM 3 OP1 U B 302 43.531 -56.925 105.060 1.00 45.31 O
ATOM 4 OP2 U B 302 45.140 -57.109 103.082 1.00 44.99 O
ATOM 5 O5' U B 302 42.962 -55.881 102.845 1.00 44.47 O
ATOM 6 C5' U B 302 41.897 -55.056 103.272 1.00 44.29 C
ATOM 7 C4' U B 302 40.556 -55.743 103.141 1.00 44.40 C
ATOM 8 O4' U B 302 40.234 -55.977 101.741 1.00 44.16 O
ATOM 9 C3' U B 302 40.437 -57.088 103.831 1.00 44.94 C
ATOM 10 O3' U B 302 39.216 -57.137 104.533 1.00 45.07 O
ATOM 11 C2' U B 302 40.401 -58.073 102.669 1.00 44.97 C
ATOM 12 O2' U B 302 39.733 -59.300 102.910 1.00 45.37 O
ATOM 13 C1' U B 302 39.709 -57.276 101.608 1.00 44.48 C
ATOM 14 N1 U B 302 40.006 -57.783 100.288 1.00 44.37 N
ATOM 15 C2 U B 302 39.023 -58.424 99.547 1.00 44.39 C
ATOM 16 O2 U B 302 37.846 -58.532 99.858 1.00 44.45 O
ATOM 17 N3 U B 302 39.482 -58.934 98.372 1.00 44.32 N
ATOM 18 C4 U B 302 40.793 -58.859 97.927 1.00 44.26 C
ATOM 19 O4 U B 302 41.105 -59.340 96.834 1.00 44.22 O
ATOM 20 C5 U B 302 41.713 -58.205 98.780 1.00 44.26 C
ATOM 21 C6 U B 302 41.296 -57.724 99.912 1.00 44.32 C
ATOM 22 P A B 303 39.222 -57.342 106.111 1.00 49.04 P
ATOM 23 OP1 A B 303 39.997 -56.222 106.693 1.00 48.89 O
ATOM 24 OP2 A B 303 39.668 -58.719 106.367 1.00 49.52 O
ATOM 25 O5' A B 303 37.691 -57.179 106.468 1.00 49.04 O
TER
ATOM 2 P A A2537 30.429 -60.808 96.649 1.00 45.94 P
ATOM 3 OP1 A A2537 29.330 -59.934 96.108 1.00 45.60 O
ATOM 4 OP2 A A2537 30.641 -62.148 96.074 1.00 46.27 O
ATOM 5 O5' A A2537 31.796 -60.017 96.626 1.00 45.68 O
ATOM 6 C5' A A2537 31.942 -58.797 97.317 1.00 45.43 C
ATOM 7 C4' A A2537 33.388 -58.458 97.473 1.00 45.35 C
ATOM 8 O4' A A2537 34.058 -59.504 98.249 1.00 45.81 O
ATOM 9 C3' A A2537 34.184 -58.427 96.188 1.00 45.11 C
ATOM 10 O3' A A2537 33.977 -57.265 95.412 1.00 44.64 O
ATOM 11 C2' A A2537 35.594 -58.590 96.706 1.00 45.26 C
ATOM 12 O2' A A2537 36.024 -57.401 97.335 1.00 45.02 O
ATOM 13 C1' A A2537 35.384 -59.649 97.787 1.00 45.77 C
ATOM 14 N9 A A2537 35.564 -60.992 97.231 1.00 46.09 N
ATOM 15 C8 A A2537 34.664 -61.939 96.895 1.00 46.33 C
ATOM 16 N7 A A2537 35.210 -62.980 96.323 1.00 46.57 N
ATOM 17 C5 A A2537 36.550 -62.691 96.268 1.00 46.48 C
ATOM 18 C6 A A2537 37.660 -63.402 95.795 1.00 46.65 C
ATOM 19 N6 A A2537 37.604 -64.614 95.257 1.00 46.97 N
ATOM 20 N1 A A2537 38.865 -62.795 95.889 1.00 46.49 N
ATOM 21 C2 A A2537 38.961 -61.578 96.438 1.00 46.20 C
ATOM 22 N3 A A2537 37.989 -60.825 96.940 1.00 46.02 N
ATOM 23 C4 A A2537 36.785 -61.449 96.811 1.00 46.18 C
ATOM 24 P G A2538 34.043 -57.352 93.805 1.00 47.55 P
ATOM 25 OP1 G A2538 33.533 -56.059 93.260 1.00 47.09 O
ATOM 26 OP2 G A2538 33.399 -58.586 93.396 1.00 47.85 O
ATOM 27 O5' G A2538 35.576 -57.483 93.527 1.00 47.55 O
TER
ATOM 1 O3' G B 301 44.798 -54.977 104.282 1.00 47.25 O
ATOM 2 P U B 302 44.117 -56.347 103.843 1.00 44.89 P
ATOM 3 OP1 U B 302 43.531 -56.925 105.060 1.00 45.31 O
ATOM 4 OP2 U B 302 45.140 -57.109 103.082 1.00 44.99 O
ATOM 5 O5' U B 302 42.962 -55.881 102.845 1.00 44.47 O
ATOM 6 C5' U B 302 41.897 -55.056 103.272 1.00 44.29 C
ATOM 7 C4' U B 302 40.556 -55.743 103.141 1.00 44.40 C
ATOM 8 O4' U B 302 40.234 -55.977 101.741 1.00 44.16 O
ATOM 9 C3' U B 302 40.437 -57.088 103.831 1.00 44.94 C
ATOM 10 O3' U B 302 39.216 -57.137 104.533 1.00 45.07 O
ATOM 11 C2' U B 302 40.401 -58.073 102.669 1.00 44.97 C
ATOM 12 O2' U B 302 39.733 -59.300 102.910 1.00 45.37 O
ATOM 13 C1' U B 302 39.709 -57.276 101.608 1.00 44.48 C
ATOM 14 N1 U B 302 40.006 -57.783 100.288 1.00 44.37 N
ATOM 15 C2 U B 302 39.023 -58.424 99.547 1.00 44.39 C
ATOM 16 O2 U B 302 37.846 -58.532 99.858 1.00 44.45 O
ATOM 17 N3 U B 302 39.482 -58.934 98.372 1.00 44.32 N
ATOM 18 C4 U B 302 40.793 -58.859 97.927 1.00 44.26 C
ATOM 19 O4 U B 302 41.105 -59.340 96.834 1.00 44.22 O
ATOM 20 C5 U B 302 41.713 -58.205 98.780 1.00 44.26 C
ATOM 21 C6 U B 302 41.296 -57.724 99.912 1.00 44.32 C
ATOM 22 P A B 303 39.222 -57.342 106.111 1.00 49.04 P
ATOM 23 OP1 A B 303 39.997 -56.222 106.693 1.00 48.89 O
ATOM 24 OP2 A B 303 39.668 -58.719 106.367 1.00 49.52 O
ATOM 25 O5' A B 303 37.691 -57.179 106.468 1.00 49.04 O
TER
Atoms:
OP1: (29.330,-59.934,96.108)
OP2: (30.641,-62.148,96.074)
C3': (34.184,-58.427,96.188)
C1': (35.384,-59.649,97.787)
C5': (31.942,-58.797,97.317)
O4': (34.058,-59.504,98.249)
C8: (34.664,-61.939,96.895)
O2': (36.024,-57.401,97.335)
C6: (37.660,-63.402,95.795)
C5: (36.550,-62.691,96.268)
C4: (36.785,-61.449,96.811)
P: (30.429,-60.808,96.649)
C4': (33.388,-58.458,97.473)
C2': (35.594,-58.590,96.706)
C2: (38.961,-61.578,96.438)
N1: (38.865,-62.795,95.889)
N3: (37.989,-60.825,96.940)
N6: (37.604,-64.614,95.257)
N7: (35.210,-62.980,96.323)
N9: (35.564,-60.992,97.231)
O5': (31.796,-60.017,96.626)
O3': (33.977,-57.265,95.412)
OP2: (30.641,-62.148,96.074)
C3': (34.184,-58.427,96.188)
C1': (35.384,-59.649,97.787)
C5': (31.942,-58.797,97.317)
O4': (34.058,-59.504,98.249)
C8: (34.664,-61.939,96.895)
O2': (36.024,-57.401,97.335)
C6: (37.660,-63.402,95.795)
C5: (36.550,-62.691,96.268)
C4: (36.785,-61.449,96.811)
P: (30.429,-60.808,96.649)
C4': (33.388,-58.458,97.473)
C2': (35.594,-58.590,96.706)
C2: (38.961,-61.578,96.438)
N1: (38.865,-62.795,95.889)
N3: (37.989,-60.825,96.940)
N6: (37.604,-64.614,95.257)
N7: (35.210,-62.980,96.323)
N9: (35.564,-60.992,97.231)
O5': (31.796,-60.017,96.626)
O3': (33.977,-57.265,95.412)
C4: (40.793,-58.859,97.927)
N3: (39.482,-58.934,98.372)
OP1: (43.531,-56.925,105.060)
OP2: (45.140,-57.109,103.082)
C2: (39.023,-58.424,99.547)
C1': (39.709,-57.276,101.608)
C3': (40.437,-57.088,103.831)
O5': (42.962,-55.881,102.845)
O4': (40.234,-55.977,101.741)
C5': (41.897,-55.056,103.272)
P: (44.117,-56.347,103.843)
C4': (40.556,-55.743,103.141)
C2': (40.401,-58.073,102.669)
O2': (39.733,-59.300,102.910)
N1: (40.006,-57.783,100.288)
O4: (41.105,-59.340,96.834)
O2: (37.846,-58.532,99.858)
C6: (41.296,-57.724,99.912)
C5: (41.713,-58.205,98.780)
O3': (39.216,-57.137,104.533)
N3: (39.482,-58.934,98.372)
OP1: (43.531,-56.925,105.060)
OP2: (45.140,-57.109,103.082)
C2: (39.023,-58.424,99.547)
C1': (39.709,-57.276,101.608)
C3': (40.437,-57.088,103.831)
O5': (42.962,-55.881,102.845)
O4': (40.234,-55.977,101.741)
C5': (41.897,-55.056,103.272)
P: (44.117,-56.347,103.843)
C4': (40.556,-55.743,103.141)
C2': (40.401,-58.073,102.669)
O2': (39.733,-59.300,102.910)
N1: (40.006,-57.783,100.288)
O4: (41.105,-59.340,96.834)
O2: (37.846,-58.532,99.858)
C6: (41.296,-57.724,99.912)
C5: (41.713,-58.205,98.780)
O3': (39.216,-57.137,104.533)
Image (generated by PyMOL):