Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:0234:0252
Extra
PDB:
ATOM 1 O3' C A 233 92.608 111.790 -9.638 1.00 44.32 O
ATOM 2 P G A 234 94.089 112.411 -9.675 1.00 47.68 P
ATOM 3 OP1 G A 234 94.440 112.751 -11.084 1.00 49.44 O
ATOM 4 OP2 G A 234 94.975 111.502 -8.898 1.00 44.04 O
ATOM 5 O5' G A 234 93.903 113.778 -8.888 1.00 44.40 O
ATOM 6 C5' G A 234 92.728 114.575 -9.101 1.00 45.95 C
ATOM 7 C4' G A 234 92.716 115.734 -8.149 1.00 48.60 C
ATOM 8 O4' G A 234 92.501 115.237 -6.795 1.00 50.66 O
ATOM 9 C3' G A 234 94.029 116.503 -8.123 1.00 48.15 C
ATOM 10 O3' G A 234 93.798 117.885 -7.985 1.00 47.61 O
ATOM 11 C2' G A 234 94.744 115.927 -6.910 1.00 48.82 C
ATOM 12 O2' G A 234 95.677 116.817 -6.333 1.00 48.93 O
ATOM 13 C1' G A 234 93.577 115.632 -5.968 1.00 49.13 C
ATOM 14 N9 G A 234 93.888 114.541 -5.048 1.00 49.37 N
ATOM 15 C8 G A 234 94.507 113.351 -5.354 1.00 49.82 C
ATOM 16 N7 G A 234 94.754 112.618 -4.305 1.00 50.48 N
ATOM 17 C5 G A 234 94.249 113.356 -3.243 1.00 50.46 C
ATOM 18 C6 G A 234 94.258 113.087 -1.848 1.00 50.30 C
ATOM 19 O6 G A 234 94.762 112.131 -1.250 1.00 50.19 O
ATOM 20 N1 G A 234 93.613 114.088 -1.131 1.00 50.76 N
ATOM 21 C2 G A 234 93.050 115.214 -1.676 1.00 50.36 C
ATOM 22 N2 G A 234 92.455 116.052 -0.814 1.00 49.72 N
ATOM 23 N3 G A 234 93.064 115.494 -2.970 1.00 49.70 N
ATOM 24 C4 G A 234 93.676 114.528 -3.689 1.00 49.44 C
ATOM 25 P A A 235 94.398 118.884 -9.087 1.00 47.99 P
ATOM 26 OP1 A A 235 93.986 118.371 -10.421 1.00 47.50 O
ATOM 27 OP2 A A 235 95.844 119.073 -8.784 1.00 44.77 O
ATOM 28 O5' A A 235 93.613 120.240 -8.825 1.00 46.81 O
TER
ATOM 1 O3' U B 251 96.634 118.608 6.788 1.00 33.24 O
ATOM 2 P G B 252 95.331 117.893 6.186 1.00 33.30 P
ATOM 3 OP1 G B 252 94.161 118.296 7.000 1.00 34.27 O
ATOM 4 OP2 G B 252 95.619 116.464 5.971 1.00 32.81 O
ATOM 5 O5' G B 252 95.190 118.548 4.753 1.00 35.27 O
ATOM 6 C5' G B 252 94.731 119.889 4.598 1.00 34.34 C
ATOM 7 C4' G B 252 93.729 119.927 3.488 1.00 36.17 C
ATOM 8 O4' G B 252 94.408 119.544 2.259 1.00 36.14 O
ATOM 9 C3' G B 252 92.596 118.929 3.684 1.00 35.59 C
ATOM 10 O3' G B 252 91.358 119.444 3.242 1.00 34.57 O
ATOM 11 C2' G B 252 93.062 117.694 2.915 1.00 36.95 C
ATOM 12 O2' G B 252 92.005 116.911 2.388 1.00 37.21 O
ATOM 13 C1' G B 252 93.924 118.294 1.802 1.00 37.45 C
ATOM 14 N9 G B 252 95.077 117.445 1.500 1.00 37.93 N
ATOM 15 C8 G B 252 95.863 116.758 2.400 1.00 37.76 C
ATOM 16 N7 G B 252 96.786 116.035 1.828 1.00 36.34 N
ATOM 17 C5 G B 252 96.611 116.264 0.470 1.00 37.97 C
ATOM 18 C6 G B 252 97.318 115.741 -0.654 1.00 39.20 C
ATOM 19 O6 G B 252 98.269 114.932 -0.670 1.00 37.04 O
ATOM 20 N1 G B 252 96.820 116.254 -1.850 1.00 38.90 N
ATOM 21 C2 G B 252 95.790 117.159 -1.954 1.00 40.59 C
ATOM 22 N2 G B 252 95.478 117.573 -3.196 1.00 39.42 N
ATOM 23 N3 G B 252 95.118 117.637 -0.919 1.00 39.49 N
ATOM 24 C4 G B 252 95.576 117.149 0.252 1.00 37.83 C
ATOM 25 P U B 253 90.076 119.307 4.201 1.00 34.20 P
ATOM 26 OP1 U B 253 90.445 119.898 5.507 1.00 33.35 O
ATOM 27 OP2 U B 253 89.618 117.901 4.139 1.00 34.12 O
ATOM 28 O5' U B 253 88.977 120.236 3.521 1.00 35.30 O
TER
ATOM 2 P G A 234 94.089 112.411 -9.675 1.00 47.68 P
ATOM 3 OP1 G A 234 94.440 112.751 -11.084 1.00 49.44 O
ATOM 4 OP2 G A 234 94.975 111.502 -8.898 1.00 44.04 O
ATOM 5 O5' G A 234 93.903 113.778 -8.888 1.00 44.40 O
ATOM 6 C5' G A 234 92.728 114.575 -9.101 1.00 45.95 C
ATOM 7 C4' G A 234 92.716 115.734 -8.149 1.00 48.60 C
ATOM 8 O4' G A 234 92.501 115.237 -6.795 1.00 50.66 O
ATOM 9 C3' G A 234 94.029 116.503 -8.123 1.00 48.15 C
ATOM 10 O3' G A 234 93.798 117.885 -7.985 1.00 47.61 O
ATOM 11 C2' G A 234 94.744 115.927 -6.910 1.00 48.82 C
ATOM 12 O2' G A 234 95.677 116.817 -6.333 1.00 48.93 O
ATOM 13 C1' G A 234 93.577 115.632 -5.968 1.00 49.13 C
ATOM 14 N9 G A 234 93.888 114.541 -5.048 1.00 49.37 N
ATOM 15 C8 G A 234 94.507 113.351 -5.354 1.00 49.82 C
ATOM 16 N7 G A 234 94.754 112.618 -4.305 1.00 50.48 N
ATOM 17 C5 G A 234 94.249 113.356 -3.243 1.00 50.46 C
ATOM 18 C6 G A 234 94.258 113.087 -1.848 1.00 50.30 C
ATOM 19 O6 G A 234 94.762 112.131 -1.250 1.00 50.19 O
ATOM 20 N1 G A 234 93.613 114.088 -1.131 1.00 50.76 N
ATOM 21 C2 G A 234 93.050 115.214 -1.676 1.00 50.36 C
ATOM 22 N2 G A 234 92.455 116.052 -0.814 1.00 49.72 N
ATOM 23 N3 G A 234 93.064 115.494 -2.970 1.00 49.70 N
ATOM 24 C4 G A 234 93.676 114.528 -3.689 1.00 49.44 C
ATOM 25 P A A 235 94.398 118.884 -9.087 1.00 47.99 P
ATOM 26 OP1 A A 235 93.986 118.371 -10.421 1.00 47.50 O
ATOM 27 OP2 A A 235 95.844 119.073 -8.784 1.00 44.77 O
ATOM 28 O5' A A 235 93.613 120.240 -8.825 1.00 46.81 O
TER
ATOM 1 O3' U B 251 96.634 118.608 6.788 1.00 33.24 O
ATOM 2 P G B 252 95.331 117.893 6.186 1.00 33.30 P
ATOM 3 OP1 G B 252 94.161 118.296 7.000 1.00 34.27 O
ATOM 4 OP2 G B 252 95.619 116.464 5.971 1.00 32.81 O
ATOM 5 O5' G B 252 95.190 118.548 4.753 1.00 35.27 O
ATOM 6 C5' G B 252 94.731 119.889 4.598 1.00 34.34 C
ATOM 7 C4' G B 252 93.729 119.927 3.488 1.00 36.17 C
ATOM 8 O4' G B 252 94.408 119.544 2.259 1.00 36.14 O
ATOM 9 C3' G B 252 92.596 118.929 3.684 1.00 35.59 C
ATOM 10 O3' G B 252 91.358 119.444 3.242 1.00 34.57 O
ATOM 11 C2' G B 252 93.062 117.694 2.915 1.00 36.95 C
ATOM 12 O2' G B 252 92.005 116.911 2.388 1.00 37.21 O
ATOM 13 C1' G B 252 93.924 118.294 1.802 1.00 37.45 C
ATOM 14 N9 G B 252 95.077 117.445 1.500 1.00 37.93 N
ATOM 15 C8 G B 252 95.863 116.758 2.400 1.00 37.76 C
ATOM 16 N7 G B 252 96.786 116.035 1.828 1.00 36.34 N
ATOM 17 C5 G B 252 96.611 116.264 0.470 1.00 37.97 C
ATOM 18 C6 G B 252 97.318 115.741 -0.654 1.00 39.20 C
ATOM 19 O6 G B 252 98.269 114.932 -0.670 1.00 37.04 O
ATOM 20 N1 G B 252 96.820 116.254 -1.850 1.00 38.90 N
ATOM 21 C2 G B 252 95.790 117.159 -1.954 1.00 40.59 C
ATOM 22 N2 G B 252 95.478 117.573 -3.196 1.00 39.42 N
ATOM 23 N3 G B 252 95.118 117.637 -0.919 1.00 39.49 N
ATOM 24 C4 G B 252 95.576 117.149 0.252 1.00 37.83 C
ATOM 25 P U B 253 90.076 119.307 4.201 1.00 34.20 P
ATOM 26 OP1 U B 253 90.445 119.898 5.507 1.00 33.35 O
ATOM 27 OP2 U B 253 89.618 117.901 4.139 1.00 34.12 O
ATOM 28 O5' U B 253 88.977 120.236 3.521 1.00 35.30 O
TER
Atoms:
OP1: (94.440,112.751,-11.084)
OP2: (94.975,111.502,-8.898)
C3': (94.029,116.503,-8.123)
C1': (93.577,115.632,-5.968)
C5': (92.728,114.575,-9.101)
O6: (94.762,112.131,-1.250)
O4': (92.501,115.237,-6.795)
C8: (94.507,113.351,-5.354)
C2: (93.050,115.214,-1.676)
C6: (94.258,113.087,-1.848)
C5: (94.249,113.356,-3.243)
C4: (93.676,114.528,-3.689)
P: (94.089,112.411,-9.675)
C4': (92.716,115.734,-8.149)
C2': (94.744,115.927,-6.910)
O2': (95.677,116.817,-6.333)
N1: (93.613,114.088,-1.131)
N2: (92.455,116.052,-0.814)
N3: (93.064,115.494,-2.970)
N7: (94.754,112.618,-4.305)
N9: (93.888,114.541,-5.048)
O5': (93.903,113.778,-8.888)
O3': (93.798,117.885,-7.985)
OP2: (94.975,111.502,-8.898)
C3': (94.029,116.503,-8.123)
C1': (93.577,115.632,-5.968)
C5': (92.728,114.575,-9.101)
O6: (94.762,112.131,-1.250)
O4': (92.501,115.237,-6.795)
C8: (94.507,113.351,-5.354)
C2: (93.050,115.214,-1.676)
C6: (94.258,113.087,-1.848)
C5: (94.249,113.356,-3.243)
C4: (93.676,114.528,-3.689)
P: (94.089,112.411,-9.675)
C4': (92.716,115.734,-8.149)
C2': (94.744,115.927,-6.910)
O2': (95.677,116.817,-6.333)
N1: (93.613,114.088,-1.131)
N2: (92.455,116.052,-0.814)
N3: (93.064,115.494,-2.970)
N7: (94.754,112.618,-4.305)
N9: (93.888,114.541,-5.048)
O5': (93.903,113.778,-8.888)
O3': (93.798,117.885,-7.985)
OP1: (94.161,118.296,7.000)
OP2: (95.619,116.464,5.971)
C3': (92.596,118.929,3.684)
C1': (93.924,118.294,1.802)
C5': (94.731,119.889,4.598)
O6: (98.269,114.932,-0.670)
O4': (94.408,119.544,2.259)
C8: (95.863,116.758,2.400)
C2: (95.790,117.159,-1.954)
C6: (97.318,115.741,-0.654)
C5: (96.611,116.264,0.470)
C4: (95.576,117.149,0.252)
P: (95.331,117.893,6.186)
C4': (93.729,119.927,3.488)
C2': (93.062,117.694,2.915)
O2': (92.005,116.911,2.388)
N1: (96.820,116.254,-1.850)
N2: (95.478,117.573,-3.196)
N3: (95.118,117.637,-0.919)
N7: (96.786,116.035,1.828)
N9: (95.077,117.445,1.500)
O5': (95.190,118.548,4.753)
O3': (91.358,119.444,3.242)
OP2: (95.619,116.464,5.971)
C3': (92.596,118.929,3.684)
C1': (93.924,118.294,1.802)
C5': (94.731,119.889,4.598)
O6: (98.269,114.932,-0.670)
O4': (94.408,119.544,2.259)
C8: (95.863,116.758,2.400)
C2: (95.790,117.159,-1.954)
C6: (97.318,115.741,-0.654)
C5: (96.611,116.264,0.470)
C4: (95.576,117.149,0.252)
P: (95.331,117.893,6.186)
C4': (93.729,119.927,3.488)
C2': (93.062,117.694,2.915)
O2': (92.005,116.911,2.388)
N1: (96.820,116.254,-1.850)
N2: (95.478,117.573,-3.196)
N3: (95.118,117.637,-0.919)
N7: (96.786,116.035,1.828)
N9: (95.077,117.445,1.500)
O5': (95.190,118.548,4.753)
O3': (91.358,119.444,3.242)
Image (generated by PyMOL):