Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A234:A252
Extra
PDB:
ATOM 1 O3' C A 233 92.894 111.693 -9.092 1.00 71.67 O
ATOM 2 P G A 234 94.385 112.267 -9.106 1.00 74.79 P
ATOM 3 OP1 G A 234 94.745 112.554 -10.531 1.00 75.44 O
ATOM 4 OP2 G A 234 95.230 111.324 -8.306 1.00 72.97 O
ATOM 5 O5' G A 234 94.203 113.650 -8.326 1.00 73.92 O
ATOM 6 C5' G A 234 93.042 114.482 -8.583 1.00 73.03 C
ATOM 7 C4' G A 234 93.027 115.670 -7.657 1.00 73.09 C
ATOM 8 O4' G A 234 92.804 115.202 -6.296 1.00 73.82 O
ATOM 9 C3' G A 234 94.330 116.452 -7.627 1.00 73.23 C
ATOM 10 O3' G A 234 94.113 117.840 -7.442 1.00 73.43 O
ATOM 11 C2' G A 234 95.053 115.861 -6.430 1.00 73.34 C
ATOM 12 O2' G A 234 95.999 116.770 -5.906 1.00 73.63 O
ATOM 13 C1' G A 234 93.890 115.580 -5.474 1.00 73.65 C
ATOM 14 N9 G A 234 94.167 114.494 -4.532 1.00 73.43 N
ATOM 15 C8 G A 234 94.728 113.270 -4.829 1.00 73.50 C
ATOM 16 N7 G A 234 94.977 112.547 -3.770 1.00 73.68 N
ATOM 17 C5 G A 234 94.538 113.326 -2.706 1.00 73.72 C
ATOM 18 C6 G A 234 94.592 113.082 -1.301 1.00 73.72 C
ATOM 19 O6 G A 234 95.104 112.128 -0.701 1.00 73.29 O
ATOM 20 N1 G A 234 93.994 114.110 -0.582 1.00 73.97 N
ATOM 21 C2 G A 234 93.440 115.242 -1.130 1.00 74.48 C
ATOM 22 N2 G A 234 92.882 116.102 -0.257 1.00 75.43 N
ATOM 23 N3 G A 234 93.424 115.508 -2.434 1.00 74.00 N
ATOM 24 C4 G A 234 93.986 114.512 -3.159 1.00 73.76 C
ATOM 25 P A A 235 94.755 118.869 -8.493 1.00 75.78 P
ATOM 26 OP1 A A 235 94.374 118.330 -9.823 1.00 76.85 O
ATOM 27 OP2 A A 235 96.189 119.128 -8.190 1.00 74.89 O
ATOM 28 O5' A A 235 93.959 120.226 -8.259 1.00 74.17 O
TER
ATOM 1 O3' U B 251 96.899 118.702 7.366 1.00 63.51 O
ATOM 2 P G B 252 95.633 117.878 6.816 1.00 61.44 P
ATOM 3 OP1 G B 252 94.480 118.229 7.684 1.00 61.95 O
ATOM 4 OP2 G B 252 96.047 116.466 6.671 1.00 61.91 O
ATOM 5 O5' G B 252 95.391 118.433 5.346 1.00 61.83 O
ATOM 6 C5' G B 252 95.068 119.815 5.123 1.00 63.41 C
ATOM 7 C4' G B 252 94.017 119.911 4.051 1.00 64.68 C
ATOM 8 O4' G B 252 94.617 119.573 2.764 1.00 66.34 O
ATOM 9 C3' G B 252 92.854 118.941 4.250 1.00 64.53 C
ATOM 10 O3' G B 252 91.602 119.464 3.833 1.00 62.54 O
ATOM 11 C2' G B 252 93.286 117.709 3.451 1.00 66.13 C
ATOM 12 O2' G B 252 92.219 116.960 2.895 1.00 65.20 O
ATOM 13 C1' G B 252 94.151 118.304 2.336 1.00 66.93 C
ATOM 14 N9 G B 252 95.304 117.451 2.050 1.00 67.68 N
ATOM 15 C8 G B 252 96.049 116.728 2.955 1.00 67.66 C
ATOM 16 N7 G B 252 96.982 116.009 2.388 1.00 68.28 N
ATOM 17 C5 G B 252 96.856 116.285 1.027 1.00 68.33 C
ATOM 18 C6 G B 252 97.589 115.791 -0.099 1.00 68.73 C
ATOM 19 O6 G B 252 98.535 114.977 -0.122 1.00 70.22 O
ATOM 20 N1 G B 252 97.118 116.341 -1.288 1.00 67.87 N
ATOM 21 C2 G B 252 96.085 117.245 -1.392 1.00 67.04 C
ATOM 22 N2 G B 252 95.779 117.666 -2.632 1.00 66.77 N
ATOM 23 N3 G B 252 95.404 117.703 -0.366 1.00 67.53 N
ATOM 24 C4 G B 252 95.836 117.185 0.804 1.00 67.78 C
ATOM 25 P U B 253 90.325 119.293 4.798 1.00 59.84 P
ATOM 26 OP1 U B 253 90.723 119.858 6.108 1.00 60.87 O
ATOM 27 OP2 U B 253 89.842 117.894 4.740 1.00 60.66 O
ATOM 28 O5' U B 253 89.223 120.238 4.135 1.00 60.23 O
TER
ATOM 2 P G A 234 94.385 112.267 -9.106 1.00 74.79 P
ATOM 3 OP1 G A 234 94.745 112.554 -10.531 1.00 75.44 O
ATOM 4 OP2 G A 234 95.230 111.324 -8.306 1.00 72.97 O
ATOM 5 O5' G A 234 94.203 113.650 -8.326 1.00 73.92 O
ATOM 6 C5' G A 234 93.042 114.482 -8.583 1.00 73.03 C
ATOM 7 C4' G A 234 93.027 115.670 -7.657 1.00 73.09 C
ATOM 8 O4' G A 234 92.804 115.202 -6.296 1.00 73.82 O
ATOM 9 C3' G A 234 94.330 116.452 -7.627 1.00 73.23 C
ATOM 10 O3' G A 234 94.113 117.840 -7.442 1.00 73.43 O
ATOM 11 C2' G A 234 95.053 115.861 -6.430 1.00 73.34 C
ATOM 12 O2' G A 234 95.999 116.770 -5.906 1.00 73.63 O
ATOM 13 C1' G A 234 93.890 115.580 -5.474 1.00 73.65 C
ATOM 14 N9 G A 234 94.167 114.494 -4.532 1.00 73.43 N
ATOM 15 C8 G A 234 94.728 113.270 -4.829 1.00 73.50 C
ATOM 16 N7 G A 234 94.977 112.547 -3.770 1.00 73.68 N
ATOM 17 C5 G A 234 94.538 113.326 -2.706 1.00 73.72 C
ATOM 18 C6 G A 234 94.592 113.082 -1.301 1.00 73.72 C
ATOM 19 O6 G A 234 95.104 112.128 -0.701 1.00 73.29 O
ATOM 20 N1 G A 234 93.994 114.110 -0.582 1.00 73.97 N
ATOM 21 C2 G A 234 93.440 115.242 -1.130 1.00 74.48 C
ATOM 22 N2 G A 234 92.882 116.102 -0.257 1.00 75.43 N
ATOM 23 N3 G A 234 93.424 115.508 -2.434 1.00 74.00 N
ATOM 24 C4 G A 234 93.986 114.512 -3.159 1.00 73.76 C
ATOM 25 P A A 235 94.755 118.869 -8.493 1.00 75.78 P
ATOM 26 OP1 A A 235 94.374 118.330 -9.823 1.00 76.85 O
ATOM 27 OP2 A A 235 96.189 119.128 -8.190 1.00 74.89 O
ATOM 28 O5' A A 235 93.959 120.226 -8.259 1.00 74.17 O
TER
ATOM 1 O3' U B 251 96.899 118.702 7.366 1.00 63.51 O
ATOM 2 P G B 252 95.633 117.878 6.816 1.00 61.44 P
ATOM 3 OP1 G B 252 94.480 118.229 7.684 1.00 61.95 O
ATOM 4 OP2 G B 252 96.047 116.466 6.671 1.00 61.91 O
ATOM 5 O5' G B 252 95.391 118.433 5.346 1.00 61.83 O
ATOM 6 C5' G B 252 95.068 119.815 5.123 1.00 63.41 C
ATOM 7 C4' G B 252 94.017 119.911 4.051 1.00 64.68 C
ATOM 8 O4' G B 252 94.617 119.573 2.764 1.00 66.34 O
ATOM 9 C3' G B 252 92.854 118.941 4.250 1.00 64.53 C
ATOM 10 O3' G B 252 91.602 119.464 3.833 1.00 62.54 O
ATOM 11 C2' G B 252 93.286 117.709 3.451 1.00 66.13 C
ATOM 12 O2' G B 252 92.219 116.960 2.895 1.00 65.20 O
ATOM 13 C1' G B 252 94.151 118.304 2.336 1.00 66.93 C
ATOM 14 N9 G B 252 95.304 117.451 2.050 1.00 67.68 N
ATOM 15 C8 G B 252 96.049 116.728 2.955 1.00 67.66 C
ATOM 16 N7 G B 252 96.982 116.009 2.388 1.00 68.28 N
ATOM 17 C5 G B 252 96.856 116.285 1.027 1.00 68.33 C
ATOM 18 C6 G B 252 97.589 115.791 -0.099 1.00 68.73 C
ATOM 19 O6 G B 252 98.535 114.977 -0.122 1.00 70.22 O
ATOM 20 N1 G B 252 97.118 116.341 -1.288 1.00 67.87 N
ATOM 21 C2 G B 252 96.085 117.245 -1.392 1.00 67.04 C
ATOM 22 N2 G B 252 95.779 117.666 -2.632 1.00 66.77 N
ATOM 23 N3 G B 252 95.404 117.703 -0.366 1.00 67.53 N
ATOM 24 C4 G B 252 95.836 117.185 0.804 1.00 67.78 C
ATOM 25 P U B 253 90.325 119.293 4.798 1.00 59.84 P
ATOM 26 OP1 U B 253 90.723 119.858 6.108 1.00 60.87 O
ATOM 27 OP2 U B 253 89.842 117.894 4.740 1.00 60.66 O
ATOM 28 O5' U B 253 89.223 120.238 4.135 1.00 60.23 O
TER
Atoms:
OP1: (94.745,112.554,-10.531)
OP2: (95.230,111.324,-8.306)
C3': (94.330,116.452,-7.627)
C1': (93.890,115.580,-5.474)
C5': (93.042,114.482,-8.583)
O6: (95.104,112.128,-0.701)
O4': (92.804,115.202,-6.296)
C8: (94.728,113.270,-4.829)
C2: (93.440,115.242,-1.130)
C6: (94.592,113.082,-1.301)
C5: (94.538,113.326,-2.706)
C4: (93.986,114.512,-3.159)
P: (94.385,112.267,-9.106)
C4': (93.027,115.670,-7.657)
C2': (95.053,115.861,-6.430)
O2': (95.999,116.770,-5.906)
N1: (93.994,114.110,-0.582)
N2: (92.882,116.102,-0.257)
N3: (93.424,115.508,-2.434)
N7: (94.977,112.547,-3.770)
N9: (94.167,114.494,-4.532)
O5': (94.203,113.650,-8.326)
O3': (94.113,117.840,-7.442)
OP2: (95.230,111.324,-8.306)
C3': (94.330,116.452,-7.627)
C1': (93.890,115.580,-5.474)
C5': (93.042,114.482,-8.583)
O6: (95.104,112.128,-0.701)
O4': (92.804,115.202,-6.296)
C8: (94.728,113.270,-4.829)
C2: (93.440,115.242,-1.130)
C6: (94.592,113.082,-1.301)
C5: (94.538,113.326,-2.706)
C4: (93.986,114.512,-3.159)
P: (94.385,112.267,-9.106)
C4': (93.027,115.670,-7.657)
C2': (95.053,115.861,-6.430)
O2': (95.999,116.770,-5.906)
N1: (93.994,114.110,-0.582)
N2: (92.882,116.102,-0.257)
N3: (93.424,115.508,-2.434)
N7: (94.977,112.547,-3.770)
N9: (94.167,114.494,-4.532)
O5': (94.203,113.650,-8.326)
O3': (94.113,117.840,-7.442)
OP1: (94.480,118.229,7.684)
OP2: (96.047,116.466,6.671)
C3': (92.854,118.941,4.250)
C1': (94.151,118.304,2.336)
C5': (95.068,119.815,5.123)
O6: (98.535,114.977,-0.122)
O4': (94.617,119.573,2.764)
C8: (96.049,116.728,2.955)
C2: (96.085,117.245,-1.392)
C6: (97.589,115.791,-0.099)
C5: (96.856,116.285,1.027)
C4: (95.836,117.185,0.804)
P: (95.633,117.878,6.816)
C4': (94.017,119.911,4.051)
C2': (93.286,117.709,3.451)
O2': (92.219,116.960,2.895)
N1: (97.118,116.341,-1.288)
N2: (95.779,117.666,-2.632)
N3: (95.404,117.703,-0.366)
N7: (96.982,116.009,2.388)
N9: (95.304,117.451,2.050)
O5': (95.391,118.433,5.346)
O3': (91.602,119.464,3.833)
OP2: (96.047,116.466,6.671)
C3': (92.854,118.941,4.250)
C1': (94.151,118.304,2.336)
C5': (95.068,119.815,5.123)
O6: (98.535,114.977,-0.122)
O4': (94.617,119.573,2.764)
C8: (96.049,116.728,2.955)
C2: (96.085,117.245,-1.392)
C6: (97.589,115.791,-0.099)
C5: (96.856,116.285,1.027)
C4: (95.836,117.185,0.804)
P: (95.633,117.878,6.816)
C4': (94.017,119.911,4.051)
C2': (93.286,117.709,3.451)
O2': (92.219,116.960,2.895)
N1: (97.118,116.341,-1.288)
N2: (95.779,117.666,-2.632)
N3: (95.404,117.703,-0.366)
N7: (96.982,116.009,2.388)
N9: (95.304,117.451,2.050)
O5': (95.391,118.433,5.346)
O3': (91.602,119.464,3.833)
Image (generated by PyMOL):