Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A234:A252
Extra
PDB:
ATOM 1 O3' C A 233 93.145 111.668 -8.968 1.00 69.47 O
ATOM 2 P G A 234 94.636 112.259 -8.987 1.00 71.55 P
ATOM 3 OP1 G A 234 95.009 112.560 -10.401 1.00 72.86 O
ATOM 4 OP2 G A 234 95.488 111.330 -8.183 1.00 71.05 O
ATOM 5 O5' G A 234 94.442 113.649 -8.235 1.00 70.70 O
ATOM 6 C5' G A 234 93.251 114.425 -8.475 1.00 69.67 C
ATOM 7 C4' G A 234 93.193 115.595 -7.533 1.00 69.31 C
ATOM 8 O4' G A 234 92.986 115.106 -6.173 1.00 68.94 O
ATOM 9 C3' G A 234 94.489 116.395 -7.509 1.00 68.46 C
ATOM 10 O3' G A 234 94.253 117.791 -7.361 1.00 68.30 O
ATOM 11 C2' G A 234 95.228 115.796 -6.321 1.00 68.43 C
ATOM 12 O2' G A 234 96.185 116.682 -5.779 1.00 68.43 O
ATOM 13 C1' G A 234 94.075 115.498 -5.360 1.00 69.05 C
ATOM 14 N9 G A 234 94.375 114.422 -4.415 1.00 69.01 N
ATOM 15 C8 G A 234 94.979 113.216 -4.691 1.00 69.43 C
ATOM 16 N7 G A 234 95.222 112.507 -3.622 1.00 69.78 N
ATOM 17 C5 G A 234 94.732 113.281 -2.578 1.00 69.67 C
ATOM 18 C6 G A 234 94.750 113.051 -1.178 1.00 69.43 C
ATOM 19 O6 G A 234 95.249 112.109 -0.556 1.00 69.49 O
ATOM 20 N1 G A 234 94.122 114.078 -0.486 1.00 69.93 N
ATOM 21 C2 G A 234 93.561 115.193 -1.058 1.00 70.35 C
ATOM 22 N2 G A 234 92.986 116.062 -0.212 1.00 71.66 N
ATOM 23 N3 G A 234 93.562 115.435 -2.357 1.00 70.00 N
ATOM 24 C4 G A 234 94.165 114.445 -3.054 1.00 69.50 C
ATOM 25 P A A 235 94.849 118.799 -8.464 1.00 69.91 P
ATOM 26 OP1 A A 235 94.445 118.264 -9.796 1.00 70.86 O
ATOM 27 OP2 A A 235 96.288 119.055 -8.182 1.00 69.36 O
ATOM 28 O5' A A 235 94.071 120.166 -8.232 1.00 68.36 O
TER
ATOM 1 O3' U B 251 97.047 118.722 7.457 1.00 59.92 O
ATOM 2 P G B 252 95.768 117.924 6.896 1.00 58.60 P
ATOM 3 OP1 G B 252 94.599 118.337 7.720 1.00 59.00 O
ATOM 4 OP2 G B 252 96.134 116.496 6.804 1.00 58.31 O
ATOM 5 O5' G B 252 95.584 118.450 5.409 1.00 58.34 O
ATOM 6 C5' G B 252 95.283 119.826 5.151 1.00 58.69 C
ATOM 7 C4' G B 252 94.234 119.900 4.079 1.00 58.77 C
ATOM 8 O4' G B 252 94.839 119.538 2.808 1.00 59.84 O
ATOM 9 C3' G B 252 93.088 118.919 4.291 1.00 58.75 C
ATOM 10 O3' G B 252 91.840 119.426 3.850 1.00 56.97 O
ATOM 11 C2' G B 252 93.554 117.675 3.542 1.00 59.94 C
ATOM 12 O2' G B 252 92.517 116.853 3.053 1.00 58.75 O
ATOM 13 C1' G B 252 94.383 118.267 2.403 1.00 60.92 C
ATOM 14 N9 G B 252 95.550 117.439 2.127 1.00 61.95 N
ATOM 15 C8 G B 252 96.309 116.741 3.042 1.00 62.49 C
ATOM 16 N7 G B 252 97.245 116.026 2.484 1.00 62.06 N
ATOM 17 C5 G B 252 97.110 116.282 1.119 1.00 62.32 C
ATOM 18 C6 G B 252 97.840 115.776 -0.004 1.00 62.49 C
ATOM 19 O6 G B 252 98.787 114.957 -0.021 1.00 63.75 O
ATOM 20 N1 G B 252 97.365 116.313 -1.197 1.00 61.24 N
ATOM 21 C2 G B 252 96.330 117.211 -1.308 1.00 60.47 C
ATOM 22 N2 G B 252 96.029 117.629 -2.551 1.00 60.54 N
ATOM 23 N3 G B 252 95.643 117.672 -0.286 1.00 60.39 N
ATOM 24 C4 G B 252 96.081 117.170 0.888 1.00 61.66 C
ATOM 25 P U B 253 90.574 119.289 4.828 1.00 55.81 P
ATOM 26 OP1 U B 253 90.971 119.912 6.122 1.00 56.02 O
ATOM 27 OP2 U B 253 90.143 117.869 4.814 1.00 54.99 O
ATOM 28 O5' U B 253 89.455 120.203 4.153 1.00 54.14 O
TER
ATOM 2 P G A 234 94.636 112.259 -8.987 1.00 71.55 P
ATOM 3 OP1 G A 234 95.009 112.560 -10.401 1.00 72.86 O
ATOM 4 OP2 G A 234 95.488 111.330 -8.183 1.00 71.05 O
ATOM 5 O5' G A 234 94.442 113.649 -8.235 1.00 70.70 O
ATOM 6 C5' G A 234 93.251 114.425 -8.475 1.00 69.67 C
ATOM 7 C4' G A 234 93.193 115.595 -7.533 1.00 69.31 C
ATOM 8 O4' G A 234 92.986 115.106 -6.173 1.00 68.94 O
ATOM 9 C3' G A 234 94.489 116.395 -7.509 1.00 68.46 C
ATOM 10 O3' G A 234 94.253 117.791 -7.361 1.00 68.30 O
ATOM 11 C2' G A 234 95.228 115.796 -6.321 1.00 68.43 C
ATOM 12 O2' G A 234 96.185 116.682 -5.779 1.00 68.43 O
ATOM 13 C1' G A 234 94.075 115.498 -5.360 1.00 69.05 C
ATOM 14 N9 G A 234 94.375 114.422 -4.415 1.00 69.01 N
ATOM 15 C8 G A 234 94.979 113.216 -4.691 1.00 69.43 C
ATOM 16 N7 G A 234 95.222 112.507 -3.622 1.00 69.78 N
ATOM 17 C5 G A 234 94.732 113.281 -2.578 1.00 69.67 C
ATOM 18 C6 G A 234 94.750 113.051 -1.178 1.00 69.43 C
ATOM 19 O6 G A 234 95.249 112.109 -0.556 1.00 69.49 O
ATOM 20 N1 G A 234 94.122 114.078 -0.486 1.00 69.93 N
ATOM 21 C2 G A 234 93.561 115.193 -1.058 1.00 70.35 C
ATOM 22 N2 G A 234 92.986 116.062 -0.212 1.00 71.66 N
ATOM 23 N3 G A 234 93.562 115.435 -2.357 1.00 70.00 N
ATOM 24 C4 G A 234 94.165 114.445 -3.054 1.00 69.50 C
ATOM 25 P A A 235 94.849 118.799 -8.464 1.00 69.91 P
ATOM 26 OP1 A A 235 94.445 118.264 -9.796 1.00 70.86 O
ATOM 27 OP2 A A 235 96.288 119.055 -8.182 1.00 69.36 O
ATOM 28 O5' A A 235 94.071 120.166 -8.232 1.00 68.36 O
TER
ATOM 1 O3' U B 251 97.047 118.722 7.457 1.00 59.92 O
ATOM 2 P G B 252 95.768 117.924 6.896 1.00 58.60 P
ATOM 3 OP1 G B 252 94.599 118.337 7.720 1.00 59.00 O
ATOM 4 OP2 G B 252 96.134 116.496 6.804 1.00 58.31 O
ATOM 5 O5' G B 252 95.584 118.450 5.409 1.00 58.34 O
ATOM 6 C5' G B 252 95.283 119.826 5.151 1.00 58.69 C
ATOM 7 C4' G B 252 94.234 119.900 4.079 1.00 58.77 C
ATOM 8 O4' G B 252 94.839 119.538 2.808 1.00 59.84 O
ATOM 9 C3' G B 252 93.088 118.919 4.291 1.00 58.75 C
ATOM 10 O3' G B 252 91.840 119.426 3.850 1.00 56.97 O
ATOM 11 C2' G B 252 93.554 117.675 3.542 1.00 59.94 C
ATOM 12 O2' G B 252 92.517 116.853 3.053 1.00 58.75 O
ATOM 13 C1' G B 252 94.383 118.267 2.403 1.00 60.92 C
ATOM 14 N9 G B 252 95.550 117.439 2.127 1.00 61.95 N
ATOM 15 C8 G B 252 96.309 116.741 3.042 1.00 62.49 C
ATOM 16 N7 G B 252 97.245 116.026 2.484 1.00 62.06 N
ATOM 17 C5 G B 252 97.110 116.282 1.119 1.00 62.32 C
ATOM 18 C6 G B 252 97.840 115.776 -0.004 1.00 62.49 C
ATOM 19 O6 G B 252 98.787 114.957 -0.021 1.00 63.75 O
ATOM 20 N1 G B 252 97.365 116.313 -1.197 1.00 61.24 N
ATOM 21 C2 G B 252 96.330 117.211 -1.308 1.00 60.47 C
ATOM 22 N2 G B 252 96.029 117.629 -2.551 1.00 60.54 N
ATOM 23 N3 G B 252 95.643 117.672 -0.286 1.00 60.39 N
ATOM 24 C4 G B 252 96.081 117.170 0.888 1.00 61.66 C
ATOM 25 P U B 253 90.574 119.289 4.828 1.00 55.81 P
ATOM 26 OP1 U B 253 90.971 119.912 6.122 1.00 56.02 O
ATOM 27 OP2 U B 253 90.143 117.869 4.814 1.00 54.99 O
ATOM 28 O5' U B 253 89.455 120.203 4.153 1.00 54.14 O
TER
Atoms:
OP1: (95.009,112.560,-10.401)
OP2: (95.488,111.330,-8.183)
C3': (94.489,116.395,-7.509)
C1': (94.075,115.498,-5.360)
C5': (93.251,114.425,-8.475)
O6: (95.249,112.109,-0.556)
O4': (92.986,115.106,-6.173)
C8: (94.979,113.216,-4.691)
C2: (93.561,115.193,-1.058)
C6: (94.750,113.051,-1.178)
C5: (94.732,113.281,-2.578)
C4: (94.165,114.445,-3.054)
P: (94.636,112.259,-8.987)
C4': (93.193,115.595,-7.533)
C2': (95.228,115.796,-6.321)
O2': (96.185,116.682,-5.779)
N1: (94.122,114.078,-0.486)
N2: (92.986,116.062,-0.212)
N3: (93.562,115.435,-2.357)
N7: (95.222,112.507,-3.622)
N9: (94.375,114.422,-4.415)
O5': (94.442,113.649,-8.235)
O3': (94.253,117.791,-7.361)
OP2: (95.488,111.330,-8.183)
C3': (94.489,116.395,-7.509)
C1': (94.075,115.498,-5.360)
C5': (93.251,114.425,-8.475)
O6: (95.249,112.109,-0.556)
O4': (92.986,115.106,-6.173)
C8: (94.979,113.216,-4.691)
C2: (93.561,115.193,-1.058)
C6: (94.750,113.051,-1.178)
C5: (94.732,113.281,-2.578)
C4: (94.165,114.445,-3.054)
P: (94.636,112.259,-8.987)
C4': (93.193,115.595,-7.533)
C2': (95.228,115.796,-6.321)
O2': (96.185,116.682,-5.779)
N1: (94.122,114.078,-0.486)
N2: (92.986,116.062,-0.212)
N3: (93.562,115.435,-2.357)
N7: (95.222,112.507,-3.622)
N9: (94.375,114.422,-4.415)
O5': (94.442,113.649,-8.235)
O3': (94.253,117.791,-7.361)
OP1: (94.599,118.337,7.720)
OP2: (96.134,116.496,6.804)
C3': (93.088,118.919,4.291)
C1': (94.383,118.267,2.403)
C5': (95.283,119.826,5.151)
O6: (98.787,114.957,-0.021)
O4': (94.839,119.538,2.808)
C8: (96.309,116.741,3.042)
C2: (96.330,117.211,-1.308)
C6: (97.840,115.776,-0.004)
C5: (97.110,116.282,1.119)
C4: (96.081,117.170,0.888)
P: (95.768,117.924,6.896)
C4': (94.234,119.900,4.079)
C2': (93.554,117.675,3.542)
O2': (92.517,116.853,3.053)
N1: (97.365,116.313,-1.197)
N2: (96.029,117.629,-2.551)
N3: (95.643,117.672,-0.286)
N7: (97.245,116.026,2.484)
N9: (95.550,117.439,2.127)
O5': (95.584,118.450,5.409)
O3': (91.840,119.426,3.850)
OP2: (96.134,116.496,6.804)
C3': (93.088,118.919,4.291)
C1': (94.383,118.267,2.403)
C5': (95.283,119.826,5.151)
O6: (98.787,114.957,-0.021)
O4': (94.839,119.538,2.808)
C8: (96.309,116.741,3.042)
C2: (96.330,117.211,-1.308)
C6: (97.840,115.776,-0.004)
C5: (97.110,116.282,1.119)
C4: (96.081,117.170,0.888)
P: (95.768,117.924,6.896)
C4': (94.234,119.900,4.079)
C2': (93.554,117.675,3.542)
O2': (92.517,116.853,3.053)
N1: (97.365,116.313,-1.197)
N2: (96.029,117.629,-2.551)
N3: (95.643,117.672,-0.286)
N7: (97.245,116.026,2.484)
N9: (95.550,117.439,2.127)
O5': (95.584,118.450,5.409)
O3': (91.840,119.426,3.850)
Image (generated by PyMOL):