ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1920:A1955

Extra

PDB:
ATOM 1 O3' A A1919 122.136 119.587 105.535 1.00 67.26 O
ATOM 2 P G A1920 121.441 120.458 106.715 1.00 68.40 P
ATOM 3 OP1 G A1920 122.059 121.816 106.835 1.00 70.07 O
ATOM 4 OP2 G A1920 121.315 119.616 107.917 1.00 69.10 O
ATOM 5 O5' G A1920 119.978 120.704 106.176 1.00 68.66 O
ATOM 6 C5' G A1920 119.163 121.719 106.719 1.00 65.85 C
ATOM 7 C4' G A1920 118.306 122.280 105.626 1.00 64.95 C
ATOM 8 O4' G A1920 118.109 121.264 104.602 1.00 64.56 O
ATOM 9 C3' G A1920 116.919 122.708 106.057 1.00 63.81 C
ATOM 10 O3' G A1920 116.919 124.031 106.585 1.00 63.71 O
ATOM 11 C2' G A1920 116.119 122.544 104.772 1.00 63.84 C
ATOM 12 O2' G A1920 116.306 123.653 103.912 1.00 61.99 O
ATOM 13 C1' G A1920 116.773 121.295 104.156 1.00 63.96 C
ATOM 14 N9 G A1920 116.144 120.015 104.505 1.00 63.62 N
ATOM 15 C8 G A1920 116.655 118.996 105.289 1.00 62.75 C
ATOM 16 N7 G A1920 115.850 117.970 105.388 1.00 63.19 N
ATOM 17 C5 G A1920 114.744 118.328 104.624 1.00 63.56 C
ATOM 18 C6 G A1920 113.551 117.618 104.343 1.00 63.80 C
ATOM 19 O6 G A1920 113.236 116.471 104.684 1.00 64.65 O
ATOM 20 N1 G A1920 112.680 118.377 103.565 1.00 63.95 N
ATOM 21 C2 G A1920 112.935 119.642 103.092 1.00 62.37 C
ATOM 22 N2 G A1920 111.962 120.216 102.385 1.00 62.92 N
ATOM 23 N3 G A1920 114.055 120.294 103.307 1.00 61.42 N
ATOM 24 C4 G A1920 114.906 119.591 104.085 1.00 62.99 C
ATOM 25 P C A1921 116.228 124.314 108.015 1.00 63.63 P
ATOM 26 OP1 C A1921 116.348 125.738 108.385 1.00 62.46 O
ATOM 27 OP2 C A1921 116.720 123.268 108.942 1.00 63.94 O
ATOM 28 O5' C A1921 114.691 124.057 107.739 1.00 64.00 O
TER

ATOM 1 O3' U B1954 106.305 116.613 100.061 1.00 54.02 O
ATOM 2 P G B1955 106.827 115.985 98.698 1.00 55.51 P
ATOM 3 OP1 G B1955 106.075 116.603 97.599 1.00 55.98 O
ATOM 4 OP2 G B1955 106.791 114.505 98.885 1.00 57.24 O
ATOM 5 O5' G B1955 108.318 116.507 98.625 1.00 56.42 O
ATOM 6 C5' G B1955 108.585 117.909 98.595 1.00 57.12 C
ATOM 7 C4' G B1955 110.057 118.140 98.714 1.00 56.16 C
ATOM 8 O4' G B1955 110.495 117.968 100.091 1.00 56.81 O
ATOM 9 C3' G B1955 110.903 117.169 97.912 1.00 55.52 C
ATOM 10 O3' G B1955 111.000 117.513 96.536 1.00 53.20 O
ATOM 11 C2' G B1955 112.225 117.274 98.637 1.00 56.92 C
ATOM 12 O2' G B1955 112.839 118.490 98.227 1.00 58.16 O
ATOM 13 C1' G B1955 111.767 117.364 100.099 1.00 57.52 C
ATOM 14 N9 G B1955 111.639 116.062 100.748 1.00 59.33 N
ATOM 15 C8 G B1955 110.503 115.278 100.812 1.00 61.20 C
ATOM 16 N7 G B1955 110.693 114.136 101.421 1.00 62.77 N
ATOM 17 C5 G B1955 112.036 114.170 101.798 1.00 62.47 C
ATOM 18 C6 G B1955 112.830 113.204 102.479 1.00 62.75 C
ATOM 19 O6 G B1955 112.501 112.085 102.899 1.00 63.80 O
ATOM 20 N1 G B1955 114.134 113.649 102.646 1.00 62.39 N
ATOM 21 C2 G B1955 114.622 114.859 102.212 1.00 61.64 C
ATOM 22 N2 G B1955 115.916 115.112 102.470 1.00 61.21 N
ATOM 23 N3 G B1955 113.902 115.762 101.571 1.00 61.17 N
ATOM 24 C4 G B1955 112.629 115.359 101.397 1.00 61.34 C
ATOM 25 P A B1956 111.191 116.341 95.444 1.00 54.63 P
ATOM 26 OP1 A B1956 110.770 116.846 94.113 1.00 54.05 O
ATOM 27 OP2 A B1956 110.532 115.139 96.010 1.00 55.64 O
ATOM 28 O5' A B1956 112.764 116.079 95.379 1.00 52.17 O
TER

Atoms:
OP1: (122.059,121.816,106.835)
OP2: (121.315,119.616,107.917)
C3': (116.919,122.708,106.057)
C1': (116.773,121.295,104.156)
C5': (119.163,121.719,106.719)
O6: (113.236,116.471,104.684)
O4': (118.109,121.264,104.602)
C8: (116.655,118.996,105.289)
C2: (112.935,119.642,103.092)
C6: (113.551,117.618,104.343)
C5: (114.744,118.328,104.624)
C4: (114.906,119.591,104.085)
P: (121.441,120.458,106.715)
C4': (118.306,122.280,105.626)
C2': (116.119,122.544,104.772)
O2': (116.306,123.653,103.912)
N1: (112.680,118.377,103.565)
N2: (111.962,120.216,102.385)
N3: (114.055,120.294,103.307)
N7: (115.850,117.970,105.388)
N9: (116.144,120.015,104.505)
O5': (119.978,120.704,106.176)
O3': (116.919,124.031,106.585)
OP1: (106.075,116.603,97.599)
OP2: (106.791,114.505,98.885)
C3': (110.903,117.169,97.912)
C1': (111.767,117.364,100.099)
C5': (108.585,117.909,98.595)
O6: (112.501,112.085,102.899)
O4': (110.495,117.968,100.091)
C8: (110.503,115.278,100.812)
C2: (114.622,114.859,102.212)
C6: (112.830,113.204,102.479)
C5: (112.036,114.170,101.798)
C4: (112.629,115.359,101.397)
P: (106.827,115.985,98.698)
C4': (110.057,118.140,98.714)
C2': (112.225,117.274,98.637)
O2': (112.839,118.490,98.227)
N1: (114.134,113.649,102.646)
N2: (115.916,115.112,102.470)
N3: (113.902,115.762,101.571)
N7: (110.693,114.136,101.421)
N9: (111.639,116.062,100.748)
O5': (108.318,116.507,98.625)
O3': (111.000,117.513,96.536)
Image (generated by PyMOL):
PyMOL image
show in jmol