Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2649:A2513
Extra
PDB:
ATOM 1 O3' G A2648 39.198 148.515 127.471 1.00 41.51 O
ATOM 2 P G A2649 37.810 149.288 127.631 1.00 43.30 P
ATOM 3 OP1 G A2649 37.563 149.946 126.332 1.00 41.68 O
ATOM 4 OP2 G A2649 37.851 150.098 128.869 1.00 41.57 O
ATOM 5 O5' G A2649 36.721 148.139 127.852 1.00 43.60 O
ATOM 6 C5' G A2649 36.344 147.262 126.781 1.00 43.47 C
ATOM 7 C4' G A2649 35.534 146.111 127.299 1.00 43.46 C
ATOM 8 O4' G A2649 36.308 145.384 128.284 1.00 43.81 O
ATOM 9 C3' G A2649 34.256 146.465 128.027 1.00 44.54 C
ATOM 10 O3' G A2649 33.212 146.722 127.097 1.00 48.52 O
ATOM 11 C2' G A2649 34.012 145.192 128.832 1.00 44.89 C
ATOM 12 O2' G A2649 33.529 144.131 128.036 1.00 42.81 O
ATOM 13 C1' G A2649 35.437 144.828 129.260 1.00 45.73 C
ATOM 14 N9 G A2649 35.788 145.378 130.567 1.00 46.70 N
ATOM 15 C8 G A2649 36.585 146.470 130.809 1.00 47.36 C
ATOM 16 N7 G A2649 36.651 146.785 132.072 1.00 48.15 N
ATOM 17 C5 G A2649 35.865 145.833 132.704 1.00 47.15 C
ATOM 18 C6 G A2649 35.534 145.696 134.059 1.00 48.54 C
ATOM 19 O6 G A2649 35.838 146.439 134.999 1.00 51.52 O
ATOM 20 N1 G A2649 34.737 144.577 134.280 1.00 48.51 N
ATOM 21 C2 G A2649 34.291 143.725 133.305 1.00 47.19 C
ATOM 22 N2 G A2649 33.561 142.682 133.719 1.00 47.13 N
ATOM 23 N3 G A2649 34.551 143.878 132.023 1.00 46.75 N
ATOM 24 C4 G A2649 35.347 144.940 131.796 1.00 46.16 C
ATOM 25 P A A2650 31.983 147.680 127.497 1.00 50.70 P
ATOM 26 OP1 A A2650 32.536 149.036 127.744 1.00 50.05 O
ATOM 27 OP2 A A2650 31.193 147.000 128.561 1.00 48.92 O
ATOM 28 O5' A A2650 31.109 147.719 126.162 1.00 47.77 O
TER
ATOM 1 O3' U B2512 28.748 145.605 139.777 1.00 46.57 O
ATOM 2 P G B2513 29.934 144.550 140.080 1.00 47.36 P
ATOM 3 OP1 G B2513 29.385 143.670 141.144 1.00 47.23 O
ATOM 4 OP2 G B2513 31.251 145.208 140.283 1.00 44.14 O
ATOM 5 O5' G B2513 30.026 143.699 138.744 1.00 47.06 O
ATOM 6 C5' G B2513 28.899 142.939 138.280 1.00 49.52 C
ATOM 7 C4' G B2513 29.280 142.130 137.059 1.00 51.40 C
ATOM 8 O4' G B2513 29.491 143.012 135.920 1.00 51.10 O
ATOM 9 C3' G B2513 30.564 141.331 137.213 1.00 50.19 C
ATOM 10 O3' G B2513 30.473 140.122 136.476 1.00 50.58 O
ATOM 11 C2' G B2513 31.596 142.272 136.614 1.00 49.55 C
ATOM 12 O2' G B2513 32.797 141.651 136.214 1.00 47.52 O
ATOM 13 C1' G B2513 30.806 142.863 135.446 1.00 50.52 C
ATOM 14 N9 G B2513 31.278 144.169 134.998 1.00 50.94 N
ATOM 15 C8 G B2513 31.892 145.135 135.756 1.00 49.44 C
ATOM 16 N7 G B2513 32.280 146.165 135.058 1.00 49.40 N
ATOM 17 C5 G B2513 31.879 145.873 133.762 1.00 50.65 C
ATOM 18 C6 G B2513 32.055 146.602 132.558 1.00 51.10 C
ATOM 19 O6 G B2513 32.633 147.686 132.388 1.00 51.15 O
ATOM 20 N1 G B2513 31.495 145.937 131.469 1.00 51.95 N
ATOM 21 C2 G B2513 30.864 144.722 131.522 1.00 51.95 C
ATOM 22 N2 G B2513 30.423 144.233 130.351 1.00 51.18 N
ATOM 23 N3 G B2513 30.691 144.031 132.640 1.00 52.05 N
ATOM 24 C4 G B2513 31.231 144.659 133.712 1.00 51.31 C
ATOM 25 P A B2514 31.229 138.819 137.012 1.00 50.67 P
ATOM 26 OP1 A B2514 30.541 138.368 138.247 1.00 50.09 O
ATOM 27 OP2 A B2514 32.668 139.162 137.051 1.00 48.87 O
ATOM 28 O5' A B2514 30.953 137.730 135.892 1.00 49.10 O
TER
ATOM 2 P G A2649 37.810 149.288 127.631 1.00 43.30 P
ATOM 3 OP1 G A2649 37.563 149.946 126.332 1.00 41.68 O
ATOM 4 OP2 G A2649 37.851 150.098 128.869 1.00 41.57 O
ATOM 5 O5' G A2649 36.721 148.139 127.852 1.00 43.60 O
ATOM 6 C5' G A2649 36.344 147.262 126.781 1.00 43.47 C
ATOM 7 C4' G A2649 35.534 146.111 127.299 1.00 43.46 C
ATOM 8 O4' G A2649 36.308 145.384 128.284 1.00 43.81 O
ATOM 9 C3' G A2649 34.256 146.465 128.027 1.00 44.54 C
ATOM 10 O3' G A2649 33.212 146.722 127.097 1.00 48.52 O
ATOM 11 C2' G A2649 34.012 145.192 128.832 1.00 44.89 C
ATOM 12 O2' G A2649 33.529 144.131 128.036 1.00 42.81 O
ATOM 13 C1' G A2649 35.437 144.828 129.260 1.00 45.73 C
ATOM 14 N9 G A2649 35.788 145.378 130.567 1.00 46.70 N
ATOM 15 C8 G A2649 36.585 146.470 130.809 1.00 47.36 C
ATOM 16 N7 G A2649 36.651 146.785 132.072 1.00 48.15 N
ATOM 17 C5 G A2649 35.865 145.833 132.704 1.00 47.15 C
ATOM 18 C6 G A2649 35.534 145.696 134.059 1.00 48.54 C
ATOM 19 O6 G A2649 35.838 146.439 134.999 1.00 51.52 O
ATOM 20 N1 G A2649 34.737 144.577 134.280 1.00 48.51 N
ATOM 21 C2 G A2649 34.291 143.725 133.305 1.00 47.19 C
ATOM 22 N2 G A2649 33.561 142.682 133.719 1.00 47.13 N
ATOM 23 N3 G A2649 34.551 143.878 132.023 1.00 46.75 N
ATOM 24 C4 G A2649 35.347 144.940 131.796 1.00 46.16 C
ATOM 25 P A A2650 31.983 147.680 127.497 1.00 50.70 P
ATOM 26 OP1 A A2650 32.536 149.036 127.744 1.00 50.05 O
ATOM 27 OP2 A A2650 31.193 147.000 128.561 1.00 48.92 O
ATOM 28 O5' A A2650 31.109 147.719 126.162 1.00 47.77 O
TER
ATOM 1 O3' U B2512 28.748 145.605 139.777 1.00 46.57 O
ATOM 2 P G B2513 29.934 144.550 140.080 1.00 47.36 P
ATOM 3 OP1 G B2513 29.385 143.670 141.144 1.00 47.23 O
ATOM 4 OP2 G B2513 31.251 145.208 140.283 1.00 44.14 O
ATOM 5 O5' G B2513 30.026 143.699 138.744 1.00 47.06 O
ATOM 6 C5' G B2513 28.899 142.939 138.280 1.00 49.52 C
ATOM 7 C4' G B2513 29.280 142.130 137.059 1.00 51.40 C
ATOM 8 O4' G B2513 29.491 143.012 135.920 1.00 51.10 O
ATOM 9 C3' G B2513 30.564 141.331 137.213 1.00 50.19 C
ATOM 10 O3' G B2513 30.473 140.122 136.476 1.00 50.58 O
ATOM 11 C2' G B2513 31.596 142.272 136.614 1.00 49.55 C
ATOM 12 O2' G B2513 32.797 141.651 136.214 1.00 47.52 O
ATOM 13 C1' G B2513 30.806 142.863 135.446 1.00 50.52 C
ATOM 14 N9 G B2513 31.278 144.169 134.998 1.00 50.94 N
ATOM 15 C8 G B2513 31.892 145.135 135.756 1.00 49.44 C
ATOM 16 N7 G B2513 32.280 146.165 135.058 1.00 49.40 N
ATOM 17 C5 G B2513 31.879 145.873 133.762 1.00 50.65 C
ATOM 18 C6 G B2513 32.055 146.602 132.558 1.00 51.10 C
ATOM 19 O6 G B2513 32.633 147.686 132.388 1.00 51.15 O
ATOM 20 N1 G B2513 31.495 145.937 131.469 1.00 51.95 N
ATOM 21 C2 G B2513 30.864 144.722 131.522 1.00 51.95 C
ATOM 22 N2 G B2513 30.423 144.233 130.351 1.00 51.18 N
ATOM 23 N3 G B2513 30.691 144.031 132.640 1.00 52.05 N
ATOM 24 C4 G B2513 31.231 144.659 133.712 1.00 51.31 C
ATOM 25 P A B2514 31.229 138.819 137.012 1.00 50.67 P
ATOM 26 OP1 A B2514 30.541 138.368 138.247 1.00 50.09 O
ATOM 27 OP2 A B2514 32.668 139.162 137.051 1.00 48.87 O
ATOM 28 O5' A B2514 30.953 137.730 135.892 1.00 49.10 O
TER
Atoms:
OP1: (37.563,149.946,126.332)
OP2: (37.851,150.098,128.869)
C3': (34.256,146.465,128.027)
C1': (35.437,144.828,129.260)
C5': (36.344,147.262,126.781)
O6: (35.838,146.439,134.999)
O4': (36.308,145.384,128.284)
C8: (36.585,146.470,130.809)
C2: (34.291,143.725,133.305)
C6: (35.534,145.696,134.059)
C5: (35.865,145.833,132.704)
C4: (35.347,144.940,131.796)
P: (37.810,149.288,127.631)
C4': (35.534,146.111,127.299)
C2': (34.012,145.192,128.832)
O2': (33.529,144.131,128.036)
N1: (34.737,144.577,134.280)
N2: (33.561,142.682,133.719)
N3: (34.551,143.878,132.023)
N7: (36.651,146.785,132.072)
N9: (35.788,145.378,130.567)
O5': (36.721,148.139,127.852)
O3': (33.212,146.722,127.097)
OP2: (37.851,150.098,128.869)
C3': (34.256,146.465,128.027)
C1': (35.437,144.828,129.260)
C5': (36.344,147.262,126.781)
O6: (35.838,146.439,134.999)
O4': (36.308,145.384,128.284)
C8: (36.585,146.470,130.809)
C2: (34.291,143.725,133.305)
C6: (35.534,145.696,134.059)
C5: (35.865,145.833,132.704)
C4: (35.347,144.940,131.796)
P: (37.810,149.288,127.631)
C4': (35.534,146.111,127.299)
C2': (34.012,145.192,128.832)
O2': (33.529,144.131,128.036)
N1: (34.737,144.577,134.280)
N2: (33.561,142.682,133.719)
N3: (34.551,143.878,132.023)
N7: (36.651,146.785,132.072)
N9: (35.788,145.378,130.567)
O5': (36.721,148.139,127.852)
O3': (33.212,146.722,127.097)
OP1: (29.385,143.670,141.144)
OP2: (31.251,145.208,140.283)
C3': (30.564,141.331,137.213)
C1': (30.806,142.863,135.446)
C5': (28.899,142.939,138.280)
O6: (32.633,147.686,132.388)
O4': (29.491,143.012,135.920)
C8: (31.892,145.135,135.756)
C2: (30.864,144.722,131.522)
C6: (32.055,146.602,132.558)
C5: (31.879,145.873,133.762)
C4: (31.231,144.659,133.712)
P: (29.934,144.550,140.080)
C4': (29.280,142.130,137.059)
C2': (31.596,142.272,136.614)
O2': (32.797,141.651,136.214)
N1: (31.495,145.937,131.469)
N2: (30.423,144.233,130.351)
N3: (30.691,144.031,132.640)
N7: (32.280,146.165,135.058)
N9: (31.278,144.169,134.998)
O5': (30.026,143.699,138.744)
O3': (30.473,140.122,136.476)
OP2: (31.251,145.208,140.283)
C3': (30.564,141.331,137.213)
C1': (30.806,142.863,135.446)
C5': (28.899,142.939,138.280)
O6: (32.633,147.686,132.388)
O4': (29.491,143.012,135.920)
C8: (31.892,145.135,135.756)
C2: (30.864,144.722,131.522)
C6: (32.055,146.602,132.558)
C5: (31.879,145.873,133.762)
C4: (31.231,144.659,133.712)
P: (29.934,144.550,140.080)
C4': (29.280,142.130,137.059)
C2': (31.596,142.272,136.614)
O2': (32.797,141.651,136.214)
N1: (31.495,145.937,131.469)
N2: (30.423,144.233,130.351)
N3: (30.691,144.031,132.640)
N7: (32.280,146.165,135.058)
N9: (31.278,144.169,134.998)
O5': (30.026,143.699,138.744)
O3': (30.473,140.122,136.476)
Image (generated by PyMOL):