Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X55:X7
Extra
PDB:
ATOM 1 O3' C A 54 44.186 18.337 11.936 1.00 33.42 O
ATOM 2 P A A 55 45.640 18.825 11.400 1.00 32.92 P
ATOM 3 OP1 A A 55 45.395 20.190 10.865 1.00 34.35 O
ATOM 4 OP2 A A 55 46.205 17.805 10.485 1.00 35.70 O
ATOM 5 O5' A A 55 46.446 18.863 12.773 1.00 28.01 O
ATOM 6 C5' A A 55 47.752 19.418 12.818 1.00 33.77 C
ATOM 7 C4' A A 55 47.967 20.226 14.073 1.00 30.22 C
ATOM 8 O4' A A 55 47.227 21.466 13.991 1.00 26.39 O
ATOM 9 C3' A A 55 47.505 19.582 15.374 1.00 29.35 C
ATOM 10 O3' A A 55 48.477 18.707 15.913 1.00 34.01 O
ATOM 11 C2' A A 55 47.252 20.782 16.269 1.00 28.32 C
ATOM 12 O2' A A 55 48.475 21.294 16.780 1.00 29.22 O
ATOM 13 C1' A A 55 46.727 21.801 15.261 1.00 27.13 C
ATOM 14 N9 A A 55 45.261 21.826 15.141 1.00 23.85 N
ATOM 15 C8 A A 55 44.503 21.255 14.148 1.00 25.79 C
ATOM 16 N7 A A 55 43.214 21.477 14.280 1.00 24.26 N
ATOM 17 C5 A A 55 43.138 22.272 15.418 1.00 24.59 C
ATOM 18 C6 A A 55 42.052 22.843 16.100 1.00 24.54 C
ATOM 19 N6 A A 55 40.788 22.712 15.703 1.00 22.61 N
ATOM 20 N1 A A 55 42.311 23.570 17.206 1.00 23.98 N
ATOM 21 C2 A A 55 43.581 23.700 17.612 1.00 26.41 C
ATOM 22 N3 A A 55 44.690 23.201 17.067 1.00 25.44 N
ATOM 23 C4 A A 55 44.395 22.495 15.959 1.00 25.42 C
ATOM 24 P A A 56 48.088 17.384 16.729 1.00 30.73 P
ATOM 25 OP1 A A 56 49.415 16.782 17.022 1.00 34.35 O
ATOM 26 OP2 A A 56 47.123 16.606 15.917 1.00 29.73 O
ATOM 27 O5' A A 56 47.452 17.896 18.092 1.00 29.63 O
TER
ATOM 1 O3' C B 6 36.828 31.193 18.378 1.00 25.47 O
ATOM 2 P G B 7 37.397 30.180 19.504 1.00 23.62 P
ATOM 3 OP1 G B 7 36.207 29.510 20.100 1.00 23.28 O
ATOM 4 OP2 G B 7 38.321 30.913 20.410 1.00 26.60 O
ATOM 5 O5' G B 7 38.243 29.156 18.652 1.00 22.21 O
ATOM 6 C5' G B 7 37.712 28.398 17.574 1.00 22.67 C
ATOM 7 C4' G B 7 38.157 26.956 17.639 1.00 21.87 C
ATOM 8 O4' G B 7 39.605 26.852 17.698 1.00 21.91 O
ATOM 9 C3' G B 7 37.693 26.172 18.856 1.00 20.81 C
ATOM 10 O3' G B 7 36.352 25.728 18.732 1.00 20.99 O
ATOM 11 C2' G B 7 38.701 25.037 18.911 1.00 21.28 C
ATOM 12 O2' G B 7 38.443 24.082 17.886 1.00 19.70 O
ATOM 13 C1' G B 7 39.978 25.781 18.538 1.00 23.25 C
ATOM 14 N9 G B 7 40.617 26.373 19.723 1.00 23.43 N
ATOM 15 C8 G B 7 40.503 27.683 20.106 1.00 22.37 C
ATOM 16 N7 G B 7 41.183 27.947 21.189 1.00 25.05 N
ATOM 17 C5 G B 7 41.787 26.738 21.524 1.00 25.74 C
ATOM 18 C6 G B 7 42.651 26.406 22.607 1.00 26.68 C
ATOM 19 O6 G B 7 43.057 27.146 23.510 1.00 29.42 O
ATOM 20 N1 G B 7 43.036 25.073 22.587 1.00 23.79 N
ATOM 21 C2 G B 7 42.634 24.165 21.638 1.00 23.38 C
ATOM 22 N2 G B 7 43.096 22.918 21.772 1.00 22.94 N
ATOM 23 N3 G B 7 41.826 24.459 20.622 1.00 25.61 N
ATOM 24 C4 G B 7 41.438 25.754 20.629 1.00 23.11 C
ATOM 25 P U B 8 35.459 25.516 20.049 1.00 20.20 P
ATOM 26 OP1 U B 8 34.052 25.476 19.563 1.00 20.96 O
ATOM 27 OP2 U B 8 35.810 26.511 21.080 1.00 20.91 O
ATOM 28 O5' U B 8 35.942 24.077 20.538 1.00 19.19 O
TER
ATOM 2 P A A 55 45.640 18.825 11.400 1.00 32.92 P
ATOM 3 OP1 A A 55 45.395 20.190 10.865 1.00 34.35 O
ATOM 4 OP2 A A 55 46.205 17.805 10.485 1.00 35.70 O
ATOM 5 O5' A A 55 46.446 18.863 12.773 1.00 28.01 O
ATOM 6 C5' A A 55 47.752 19.418 12.818 1.00 33.77 C
ATOM 7 C4' A A 55 47.967 20.226 14.073 1.00 30.22 C
ATOM 8 O4' A A 55 47.227 21.466 13.991 1.00 26.39 O
ATOM 9 C3' A A 55 47.505 19.582 15.374 1.00 29.35 C
ATOM 10 O3' A A 55 48.477 18.707 15.913 1.00 34.01 O
ATOM 11 C2' A A 55 47.252 20.782 16.269 1.00 28.32 C
ATOM 12 O2' A A 55 48.475 21.294 16.780 1.00 29.22 O
ATOM 13 C1' A A 55 46.727 21.801 15.261 1.00 27.13 C
ATOM 14 N9 A A 55 45.261 21.826 15.141 1.00 23.85 N
ATOM 15 C8 A A 55 44.503 21.255 14.148 1.00 25.79 C
ATOM 16 N7 A A 55 43.214 21.477 14.280 1.00 24.26 N
ATOM 17 C5 A A 55 43.138 22.272 15.418 1.00 24.59 C
ATOM 18 C6 A A 55 42.052 22.843 16.100 1.00 24.54 C
ATOM 19 N6 A A 55 40.788 22.712 15.703 1.00 22.61 N
ATOM 20 N1 A A 55 42.311 23.570 17.206 1.00 23.98 N
ATOM 21 C2 A A 55 43.581 23.700 17.612 1.00 26.41 C
ATOM 22 N3 A A 55 44.690 23.201 17.067 1.00 25.44 N
ATOM 23 C4 A A 55 44.395 22.495 15.959 1.00 25.42 C
ATOM 24 P A A 56 48.088 17.384 16.729 1.00 30.73 P
ATOM 25 OP1 A A 56 49.415 16.782 17.022 1.00 34.35 O
ATOM 26 OP2 A A 56 47.123 16.606 15.917 1.00 29.73 O
ATOM 27 O5' A A 56 47.452 17.896 18.092 1.00 29.63 O
TER
ATOM 1 O3' C B 6 36.828 31.193 18.378 1.00 25.47 O
ATOM 2 P G B 7 37.397 30.180 19.504 1.00 23.62 P
ATOM 3 OP1 G B 7 36.207 29.510 20.100 1.00 23.28 O
ATOM 4 OP2 G B 7 38.321 30.913 20.410 1.00 26.60 O
ATOM 5 O5' G B 7 38.243 29.156 18.652 1.00 22.21 O
ATOM 6 C5' G B 7 37.712 28.398 17.574 1.00 22.67 C
ATOM 7 C4' G B 7 38.157 26.956 17.639 1.00 21.87 C
ATOM 8 O4' G B 7 39.605 26.852 17.698 1.00 21.91 O
ATOM 9 C3' G B 7 37.693 26.172 18.856 1.00 20.81 C
ATOM 10 O3' G B 7 36.352 25.728 18.732 1.00 20.99 O
ATOM 11 C2' G B 7 38.701 25.037 18.911 1.00 21.28 C
ATOM 12 O2' G B 7 38.443 24.082 17.886 1.00 19.70 O
ATOM 13 C1' G B 7 39.978 25.781 18.538 1.00 23.25 C
ATOM 14 N9 G B 7 40.617 26.373 19.723 1.00 23.43 N
ATOM 15 C8 G B 7 40.503 27.683 20.106 1.00 22.37 C
ATOM 16 N7 G B 7 41.183 27.947 21.189 1.00 25.05 N
ATOM 17 C5 G B 7 41.787 26.738 21.524 1.00 25.74 C
ATOM 18 C6 G B 7 42.651 26.406 22.607 1.00 26.68 C
ATOM 19 O6 G B 7 43.057 27.146 23.510 1.00 29.42 O
ATOM 20 N1 G B 7 43.036 25.073 22.587 1.00 23.79 N
ATOM 21 C2 G B 7 42.634 24.165 21.638 1.00 23.38 C
ATOM 22 N2 G B 7 43.096 22.918 21.772 1.00 22.94 N
ATOM 23 N3 G B 7 41.826 24.459 20.622 1.00 25.61 N
ATOM 24 C4 G B 7 41.438 25.754 20.629 1.00 23.11 C
ATOM 25 P U B 8 35.459 25.516 20.049 1.00 20.20 P
ATOM 26 OP1 U B 8 34.052 25.476 19.563 1.00 20.96 O
ATOM 27 OP2 U B 8 35.810 26.511 21.080 1.00 20.91 O
ATOM 28 O5' U B 8 35.942 24.077 20.538 1.00 19.19 O
TER
Atoms:
OP1: (45.395,20.190,10.865)
OP2: (46.205,17.805,10.485)
C3': (47.505,19.582,15.374)
C1': (46.727,21.801,15.261)
C5': (47.752,19.418,12.818)
O4': (47.227,21.466,13.991)
C8: (44.503,21.255,14.148)
O2': (48.475,21.294,16.780)
C6: (42.052,22.843,16.100)
C5: (43.138,22.272,15.418)
C4: (44.395,22.495,15.959)
P: (45.640,18.825,11.400)
C4': (47.967,20.226,14.073)
C2': (47.252,20.782,16.269)
C2: (43.581,23.700,17.612)
N1: (42.311,23.570,17.206)
N3: (44.690,23.201,17.067)
N6: (40.788,22.712,15.703)
N7: (43.214,21.477,14.280)
N9: (45.261,21.826,15.141)
O5': (46.446,18.863,12.773)
O3': (48.477,18.707,15.913)
OP2: (46.205,17.805,10.485)
C3': (47.505,19.582,15.374)
C1': (46.727,21.801,15.261)
C5': (47.752,19.418,12.818)
O4': (47.227,21.466,13.991)
C8: (44.503,21.255,14.148)
O2': (48.475,21.294,16.780)
C6: (42.052,22.843,16.100)
C5: (43.138,22.272,15.418)
C4: (44.395,22.495,15.959)
P: (45.640,18.825,11.400)
C4': (47.967,20.226,14.073)
C2': (47.252,20.782,16.269)
C2: (43.581,23.700,17.612)
N1: (42.311,23.570,17.206)
N3: (44.690,23.201,17.067)
N6: (40.788,22.712,15.703)
N7: (43.214,21.477,14.280)
N9: (45.261,21.826,15.141)
O5': (46.446,18.863,12.773)
O3': (48.477,18.707,15.913)
OP1: (36.207,29.510,20.100)
OP2: (38.321,30.913,20.410)
C3': (37.693,26.172,18.856)
C1': (39.978,25.781,18.538)
C5': (37.712,28.398,17.574)
O6: (43.057,27.146,23.510)
O4': (39.605,26.852,17.698)
C8: (40.503,27.683,20.106)
C2: (42.634,24.165,21.638)
C6: (42.651,26.406,22.607)
C5: (41.787,26.738,21.524)
C4: (41.438,25.754,20.629)
P: (37.397,30.180,19.504)
C4': (38.157,26.956,17.639)
C2': (38.701,25.037,18.911)
O2': (38.443,24.082,17.886)
N1: (43.036,25.073,22.587)
N2: (43.096,22.918,21.772)
N3: (41.826,24.459,20.622)
N7: (41.183,27.947,21.189)
N9: (40.617,26.373,19.723)
O5': (38.243,29.156,18.652)
O3': (36.352,25.728,18.732)
OP2: (38.321,30.913,20.410)
C3': (37.693,26.172,18.856)
C1': (39.978,25.781,18.538)
C5': (37.712,28.398,17.574)
O6: (43.057,27.146,23.510)
O4': (39.605,26.852,17.698)
C8: (40.503,27.683,20.106)
C2: (42.634,24.165,21.638)
C6: (42.651,26.406,22.607)
C5: (41.787,26.738,21.524)
C4: (41.438,25.754,20.629)
P: (37.397,30.180,19.504)
C4': (38.157,26.956,17.639)
C2': (38.701,25.037,18.911)
O2': (38.443,24.082,17.886)
N1: (43.036,25.073,22.587)
N2: (43.096,22.918,21.772)
N3: (41.826,24.459,20.622)
N7: (41.183,27.947,21.189)
N9: (40.617,26.373,19.723)
O5': (38.243,29.156,18.652)
O3': (36.352,25.728,18.732)
Image (generated by PyMOL):