Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A446:A452
Extra
PDB:
ATOM 1 O3' U A 445 50.091 130.070 53.656 1.00 33.83 O
ATOM 2 P G A 446 50.544 130.068 55.195 1.00 35.59 P
ATOM 3 OP1 G A 446 51.748 129.217 55.196 1.00 33.44 O
ATOM 4 OP2 G A 446 49.391 129.721 56.077 1.00 35.27 O
ATOM 5 O5' G A 446 50.978 131.568 55.490 1.00 34.40 O
ATOM 6 C5' G A 446 50.928 132.086 56.825 1.00 33.46 C
ATOM 7 C4' G A 446 51.097 133.577 56.806 1.00 33.72 C
ATOM 8 O4' G A 446 52.401 133.890 56.251 1.00 34.71 O
ATOM 9 C3' G A 446 50.109 134.331 55.929 1.00 32.97 C
ATOM 10 O3' G A 446 48.921 134.651 56.648 1.00 32.43 O
ATOM 11 C2' G A 446 50.881 135.589 55.562 1.00 33.25 C
ATOM 12 O2' G A 446 50.842 136.512 56.627 1.00 33.59 O
ATOM 13 C1' G A 446 52.315 135.064 55.470 1.00 32.72 C
ATOM 14 N9 G A 446 52.848 134.778 54.144 1.00 31.61 N
ATOM 15 C8 G A 446 53.141 133.539 53.620 1.00 32.22 C
ATOM 16 N7 G A 446 53.722 133.600 52.453 1.00 33.10 N
ATOM 17 C5 G A 446 53.803 134.961 52.181 1.00 31.10 C
ATOM 18 C6 G A 446 54.365 135.638 51.085 1.00 30.07 C
ATOM 19 O6 G A 446 54.987 135.165 50.136 1.00 30.87 O
ATOM 20 N1 G A 446 54.170 137.014 51.175 1.00 30.07 N
ATOM 21 C2 G A 446 53.539 137.657 52.207 1.00 29.98 C
ATOM 22 N2 G A 446 53.388 138.981 52.075 1.00 30.98 N
ATOM 23 N3 G A 446 53.073 137.041 53.279 1.00 30.82 N
ATOM 24 C4 G A 446 53.227 135.699 53.195 1.00 31.69 C
ATOM 25 P A A 447 47.500 134.592 55.904 1.00 30.92 P
ATOM 26 OP1 A A 447 46.469 134.755 56.922 1.00 28.79 O
ATOM 27 OP2 A A 447 47.527 133.373 55.093 1.00 32.81 O
ATOM 28 O5' A A 447 47.496 135.861 54.947 1.00 31.28 O
TER
ATOM 1 O3' A B 451 52.480 142.221 49.880 1.00 40.15 O
ATOM 2 P G B 452 52.930 141.905 48.389 1.00 41.60 P
ATOM 3 OP1 G B 452 53.258 143.226 47.817 1.00 39.44 O
ATOM 4 OP2 G B 452 51.928 141.035 47.720 1.00 40.78 O
ATOM 5 O5' G B 452 54.261 141.065 48.604 1.00 40.06 O
ATOM 6 C5' G B 452 55.476 141.720 48.935 1.00 41.42 C
ATOM 7 C4' G B 452 55.476 142.093 50.387 1.00 42.75 C
ATOM 8 O4' G B 452 55.244 140.918 51.219 1.00 42.04 O
ATOM 9 C3' G B 452 56.808 142.661 50.839 1.00 41.99 C
ATOM 10 O3' G B 452 56.524 143.552 51.897 1.00 43.34 O
ATOM 11 C2' G B 452 57.512 141.430 51.375 1.00 40.82 C
ATOM 12 O2' G B 452 58.522 141.764 52.290 1.00 40.36 O
ATOM 13 C1' G B 452 56.345 140.758 52.081 1.00 40.29 C
ATOM 14 N9 G B 452 56.528 139.354 52.396 1.00 37.67 N
ATOM 15 C8 G B 452 57.093 138.372 51.626 1.00 38.10 C
ATOM 16 N7 G B 452 57.142 137.216 52.230 1.00 37.71 N
ATOM 17 C5 G B 452 56.562 137.458 53.465 1.00 37.30 C
ATOM 18 C6 G B 452 56.317 136.588 54.551 1.00 38.22 C
ATOM 19 O6 G B 452 56.589 135.384 54.650 1.00 37.70 O
ATOM 20 N1 G B 452 55.679 137.250 55.604 1.00 38.33 N
ATOM 21 C2 G B 452 55.316 138.573 55.599 1.00 37.61 C
ATOM 22 N2 G B 452 54.671 139.016 56.677 1.00 38.28 N
ATOM 23 N3 G B 452 55.558 139.395 54.600 1.00 36.59 N
ATOM 24 C4 G B 452 56.174 138.773 53.573 1.00 36.86 C
ATOM 25 P U B 453 57.651 144.545 52.414 1.00 44.84 P
ATOM 26 OP1 U B 453 58.498 144.903 51.246 1.00 43.40 O
ATOM 27 OP2 U B 453 58.275 143.925 53.601 1.00 44.10 O
ATOM 28 O5' U B 453 56.780 145.777 52.912 1.00 42.15 O
TER
ATOM 2 P G A 446 50.544 130.068 55.195 1.00 35.59 P
ATOM 3 OP1 G A 446 51.748 129.217 55.196 1.00 33.44 O
ATOM 4 OP2 G A 446 49.391 129.721 56.077 1.00 35.27 O
ATOM 5 O5' G A 446 50.978 131.568 55.490 1.00 34.40 O
ATOM 6 C5' G A 446 50.928 132.086 56.825 1.00 33.46 C
ATOM 7 C4' G A 446 51.097 133.577 56.806 1.00 33.72 C
ATOM 8 O4' G A 446 52.401 133.890 56.251 1.00 34.71 O
ATOM 9 C3' G A 446 50.109 134.331 55.929 1.00 32.97 C
ATOM 10 O3' G A 446 48.921 134.651 56.648 1.00 32.43 O
ATOM 11 C2' G A 446 50.881 135.589 55.562 1.00 33.25 C
ATOM 12 O2' G A 446 50.842 136.512 56.627 1.00 33.59 O
ATOM 13 C1' G A 446 52.315 135.064 55.470 1.00 32.72 C
ATOM 14 N9 G A 446 52.848 134.778 54.144 1.00 31.61 N
ATOM 15 C8 G A 446 53.141 133.539 53.620 1.00 32.22 C
ATOM 16 N7 G A 446 53.722 133.600 52.453 1.00 33.10 N
ATOM 17 C5 G A 446 53.803 134.961 52.181 1.00 31.10 C
ATOM 18 C6 G A 446 54.365 135.638 51.085 1.00 30.07 C
ATOM 19 O6 G A 446 54.987 135.165 50.136 1.00 30.87 O
ATOM 20 N1 G A 446 54.170 137.014 51.175 1.00 30.07 N
ATOM 21 C2 G A 446 53.539 137.657 52.207 1.00 29.98 C
ATOM 22 N2 G A 446 53.388 138.981 52.075 1.00 30.98 N
ATOM 23 N3 G A 446 53.073 137.041 53.279 1.00 30.82 N
ATOM 24 C4 G A 446 53.227 135.699 53.195 1.00 31.69 C
ATOM 25 P A A 447 47.500 134.592 55.904 1.00 30.92 P
ATOM 26 OP1 A A 447 46.469 134.755 56.922 1.00 28.79 O
ATOM 27 OP2 A A 447 47.527 133.373 55.093 1.00 32.81 O
ATOM 28 O5' A A 447 47.496 135.861 54.947 1.00 31.28 O
TER
ATOM 1 O3' A B 451 52.480 142.221 49.880 1.00 40.15 O
ATOM 2 P G B 452 52.930 141.905 48.389 1.00 41.60 P
ATOM 3 OP1 G B 452 53.258 143.226 47.817 1.00 39.44 O
ATOM 4 OP2 G B 452 51.928 141.035 47.720 1.00 40.78 O
ATOM 5 O5' G B 452 54.261 141.065 48.604 1.00 40.06 O
ATOM 6 C5' G B 452 55.476 141.720 48.935 1.00 41.42 C
ATOM 7 C4' G B 452 55.476 142.093 50.387 1.00 42.75 C
ATOM 8 O4' G B 452 55.244 140.918 51.219 1.00 42.04 O
ATOM 9 C3' G B 452 56.808 142.661 50.839 1.00 41.99 C
ATOM 10 O3' G B 452 56.524 143.552 51.897 1.00 43.34 O
ATOM 11 C2' G B 452 57.512 141.430 51.375 1.00 40.82 C
ATOM 12 O2' G B 452 58.522 141.764 52.290 1.00 40.36 O
ATOM 13 C1' G B 452 56.345 140.758 52.081 1.00 40.29 C
ATOM 14 N9 G B 452 56.528 139.354 52.396 1.00 37.67 N
ATOM 15 C8 G B 452 57.093 138.372 51.626 1.00 38.10 C
ATOM 16 N7 G B 452 57.142 137.216 52.230 1.00 37.71 N
ATOM 17 C5 G B 452 56.562 137.458 53.465 1.00 37.30 C
ATOM 18 C6 G B 452 56.317 136.588 54.551 1.00 38.22 C
ATOM 19 O6 G B 452 56.589 135.384 54.650 1.00 37.70 O
ATOM 20 N1 G B 452 55.679 137.250 55.604 1.00 38.33 N
ATOM 21 C2 G B 452 55.316 138.573 55.599 1.00 37.61 C
ATOM 22 N2 G B 452 54.671 139.016 56.677 1.00 38.28 N
ATOM 23 N3 G B 452 55.558 139.395 54.600 1.00 36.59 N
ATOM 24 C4 G B 452 56.174 138.773 53.573 1.00 36.86 C
ATOM 25 P U B 453 57.651 144.545 52.414 1.00 44.84 P
ATOM 26 OP1 U B 453 58.498 144.903 51.246 1.00 43.40 O
ATOM 27 OP2 U B 453 58.275 143.925 53.601 1.00 44.10 O
ATOM 28 O5' U B 453 56.780 145.777 52.912 1.00 42.15 O
TER
Atoms:
OP1: (51.748,129.217,55.196)
OP2: (49.391,129.721,56.077)
C3': (50.109,134.331,55.929)
C1': (52.315,135.064,55.470)
C5': (50.928,132.086,56.825)
O6: (54.987,135.165,50.136)
O4': (52.401,133.890,56.251)
C8: (53.141,133.539,53.620)
C2: (53.539,137.657,52.207)
C6: (54.365,135.638,51.085)
C5: (53.803,134.961,52.181)
C4: (53.227,135.699,53.195)
P: (50.544,130.068,55.195)
C4': (51.097,133.577,56.806)
C2': (50.881,135.589,55.562)
O2': (50.842,136.512,56.627)
N1: (54.170,137.014,51.175)
N2: (53.388,138.981,52.075)
N3: (53.073,137.041,53.279)
N7: (53.722,133.600,52.453)
N9: (52.848,134.778,54.144)
O5': (50.978,131.568,55.490)
O3': (48.921,134.651,56.648)
OP2: (49.391,129.721,56.077)
C3': (50.109,134.331,55.929)
C1': (52.315,135.064,55.470)
C5': (50.928,132.086,56.825)
O6: (54.987,135.165,50.136)
O4': (52.401,133.890,56.251)
C8: (53.141,133.539,53.620)
C2: (53.539,137.657,52.207)
C6: (54.365,135.638,51.085)
C5: (53.803,134.961,52.181)
C4: (53.227,135.699,53.195)
P: (50.544,130.068,55.195)
C4': (51.097,133.577,56.806)
C2': (50.881,135.589,55.562)
O2': (50.842,136.512,56.627)
N1: (54.170,137.014,51.175)
N2: (53.388,138.981,52.075)
N3: (53.073,137.041,53.279)
N7: (53.722,133.600,52.453)
N9: (52.848,134.778,54.144)
O5': (50.978,131.568,55.490)
O3': (48.921,134.651,56.648)
OP1: (53.258,143.226,47.817)
OP2: (51.928,141.035,47.720)
C3': (56.808,142.661,50.839)
C1': (56.345,140.758,52.081)
C5': (55.476,141.720,48.935)
O6: (56.589,135.384,54.650)
O4': (55.244,140.918,51.219)
C8: (57.093,138.372,51.626)
C2: (55.316,138.573,55.599)
C6: (56.317,136.588,54.551)
C5: (56.562,137.458,53.465)
C4: (56.174,138.773,53.573)
P: (52.930,141.905,48.389)
C4': (55.476,142.093,50.387)
C2': (57.512,141.430,51.375)
O2': (58.522,141.764,52.290)
N1: (55.679,137.250,55.604)
N2: (54.671,139.016,56.677)
N3: (55.558,139.395,54.600)
N7: (57.142,137.216,52.230)
N9: (56.528,139.354,52.396)
O5': (54.261,141.065,48.604)
O3': (56.524,143.552,51.897)
OP2: (51.928,141.035,47.720)
C3': (56.808,142.661,50.839)
C1': (56.345,140.758,52.081)
C5': (55.476,141.720,48.935)
O6: (56.589,135.384,54.650)
O4': (55.244,140.918,51.219)
C8: (57.093,138.372,51.626)
C2: (55.316,138.573,55.599)
C6: (56.317,136.588,54.551)
C5: (56.562,137.458,53.465)
C4: (56.174,138.773,53.573)
P: (52.930,141.905,48.389)
C4': (55.476,142.093,50.387)
C2': (57.512,141.430,51.375)
O2': (58.522,141.764,52.290)
N1: (55.679,137.250,55.604)
N2: (54.671,139.016,56.677)
N3: (55.558,139.395,54.600)
N7: (57.142,137.216,52.230)
N9: (56.528,139.354,52.396)
O5': (54.261,141.065,48.604)
O3': (56.524,143.552,51.897)
Image (generated by PyMOL):