ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A908:A2125

Extra

PDB:
ATOM 1 O3' C A 907 68.328 96.722 75.874 1.00 34.10 O
ATOM 2 P G A 908 66.810 96.528 75.386 1.00 31.89 P
ATOM 3 OP1 G A 908 66.836 95.769 74.154 1.00 33.25 O
ATOM 4 OP2 G A 908 66.125 97.845 75.425 1.00 31.40 O
ATOM 5 O5' G A 908 66.243 95.605 76.536 1.00 33.34 O
ATOM 6 C5' G A 908 64.885 95.185 76.591 1.00 36.19 C
ATOM 7 C4' G A 908 64.591 94.668 77.985 1.00 37.80 C
ATOM 8 O4' G A 908 65.480 93.566 78.320 1.00 39.93 O
ATOM 9 C3' G A 908 64.920 95.631 79.118 1.00 38.50 C
ATOM 10 O3' G A 908 63.875 96.603 79.245 1.00 39.85 O
ATOM 11 C2' G A 908 64.963 94.699 80.336 1.00 38.59 C
ATOM 12 O2' G A 908 63.664 94.470 80.832 1.00 38.10 O
ATOM 13 C1' G A 908 65.412 93.365 79.721 1.00 39.48 C
ATOM 14 N9 G A 908 66.614 92.688 80.230 1.00 40.00 N
ATOM 15 C8 G A 908 66.679 91.391 80.704 1.00 40.94 C
ATOM 16 N7 G A 908 67.880 91.030 81.065 1.00 41.57 N
ATOM 17 C5 G A 908 68.662 92.154 80.819 1.00 43.04 C
ATOM 18 C6 G A 908 70.069 92.364 80.969 1.00 44.19 C
ATOM 19 O6 G A 908 70.947 91.561 81.352 1.00 44.88 O
ATOM 20 N1 G A 908 70.422 93.655 80.599 1.00 42.28 N
ATOM 21 C2 G A 908 69.560 94.609 80.134 1.00 41.70 C
ATOM 22 N2 G A 908 70.111 95.786 79.829 1.00 43.29 N
ATOM 23 N3 G A 908 68.273 94.430 79.974 1.00 40.62 N
ATOM 24 C4 G A 908 67.891 93.193 80.327 1.00 41.10 C
ATOM 25 P A A 909 64.178 98.077 79.831 1.00 39.85 P
ATOM 26 OP1 A A 909 63.180 98.961 79.202 1.00 38.12 O
ATOM 27 OP2 A A 909 65.626 98.440 79.795 1.00 41.32 O
ATOM 28 O5' A A 909 63.780 97.984 81.358 1.00 42.87 O
TER

ATOM 1 O3' U B2124 79.571 99.655 79.967 1.00 42.28 O
ATOM 2 P G B2125 78.794 99.973 81.324 1.00 44.57 P
ATOM 3 OP1 G B2125 78.511 101.431 81.409 1.00 43.76 O
ATOM 4 OP2 G B2125 79.638 99.325 82.361 1.00 43.77 O
ATOM 5 O5' G B2125 77.412 99.192 81.140 1.00 42.93 O
ATOM 6 C5' G B2125 76.541 99.510 80.029 1.00 43.05 C
ATOM 7 C4' G B2125 75.459 98.466 79.858 1.00 42.33 C
ATOM 8 O4' G B2125 76.051 97.209 79.476 1.00 42.25 O
ATOM 9 C3' G B2125 74.629 98.119 81.076 1.00 41.47 C
ATOM 10 O3' G B2125 73.616 99.061 81.294 1.00 39.70 O
ATOM 11 C2' G B2125 74.082 96.746 80.719 1.00 42.13 C
ATOM 12 O2' G B2125 72.985 96.679 79.835 1.00 41.87 O
ATOM 13 C1' G B2125 75.288 96.140 80.017 1.00 43.21 C
ATOM 14 N9 G B2125 76.104 95.464 81.011 1.00 45.27 N
ATOM 15 C8 G B2125 77.303 95.895 81.507 1.00 46.09 C
ATOM 16 N7 G B2125 77.802 95.093 82.405 1.00 46.81 N
ATOM 17 C5 G B2125 76.874 94.071 82.514 1.00 46.21 C
ATOM 18 C6 G B2125 76.879 92.927 83.334 1.00 46.66 C
ATOM 19 O6 G B2125 77.721 92.586 84.162 1.00 47.44 O
ATOM 20 N1 G B2125 75.759 92.136 83.122 1.00 46.34 N
ATOM 21 C2 G B2125 74.757 92.416 82.238 1.00 45.88 C
ATOM 22 N2 G B2125 73.772 91.524 82.165 1.00 44.78 N
ATOM 23 N3 G B2125 74.729 93.497 81.474 1.00 45.91 N
ATOM 24 C4 G B2125 75.820 94.275 81.660 1.00 45.69 C
ATOM 25 P A B2126 73.141 99.400 82.795 1.00 42.15 P
ATOM 26 OP1 A B2126 72.223 100.543 82.538 1.00 41.66 O
ATOM 27 OP2 A B2126 74.225 99.544 83.802 1.00 40.88 O
ATOM 28 O5' A B2126 72.338 98.111 83.287 1.00 41.68 O
TER

Atoms:
OP1: (66.836,95.769,74.154)
OP2: (66.125,97.845,75.425)
C3': (64.920,95.631,79.118)
C1': (65.412,93.365,79.721)
C5': (64.885,95.185,76.591)
O6: (70.947,91.561,81.352)
O4': (65.480,93.566,78.320)
C8: (66.679,91.391,80.704)
C2: (69.560,94.609,80.134)
C6: (70.069,92.364,80.969)
C5: (68.662,92.154,80.819)
C4: (67.891,93.193,80.327)
P: (66.810,96.528,75.386)
C4': (64.591,94.668,77.985)
C2': (64.963,94.699,80.336)
O2': (63.664,94.470,80.832)
N1: (70.422,93.655,80.599)
N2: (70.111,95.786,79.829)
N3: (68.273,94.430,79.974)
N7: (67.880,91.030,81.065)
N9: (66.614,92.688,80.230)
O5': (66.243,95.605,76.536)
O3': (63.875,96.603,79.245)
OP1: (78.511,101.431,81.409)
OP2: (79.638,99.325,82.361)
C3': (74.629,98.119,81.076)
C1': (75.288,96.140,80.017)
C5': (76.541,99.510,80.029)
O6: (77.721,92.586,84.162)
O4': (76.051,97.209,79.476)
C8: (77.303,95.895,81.507)
C2: (74.757,92.416,82.238)
C6: (76.879,92.927,83.334)
C5: (76.874,94.071,82.514)
C4: (75.820,94.275,81.660)
P: (78.794,99.973,81.324)
C4': (75.459,98.466,79.858)
C2': (74.082,96.746,80.719)
O2': (72.985,96.679,79.835)
N1: (75.759,92.136,83.122)
N2: (73.772,91.524,82.165)
N3: (74.729,93.497,81.474)
N7: (77.802,95.093,82.405)
N9: (76.104,95.464,81.011)
O5': (77.412,99.192,81.140)
O3': (73.616,99.061,81.294)
Image (generated by PyMOL):
PyMOL image
show in jmol