ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:11640:11692

Extra

PDB:
ATOM 1 O3' U A1639 22.806 53.681 134.748 1.00 72.68 O
ATOM 2 P A A1640 21.943 52.540 135.433 1.00 66.62 P
ATOM 3 OP1 A A1640 20.694 52.414 134.644 1.00 66.30 O
ATOM 4 OP2 A A1640 21.851 52.857 136.867 1.00 67.41 O
ATOM 5 O5' A A1640 22.842 51.253 135.251 1.00 65.95 O
ATOM 6 C5' A A1640 23.210 50.752 133.989 1.00 65.17 C
ATOM 7 C4' A A1640 24.130 49.593 134.188 1.00 64.74 C
ATOM 8 O4' A A1640 25.466 50.089 134.429 1.00 64.97 O
ATOM 9 C3' A A1640 23.818 48.741 135.409 1.00 64.96 C
ATOM 10 O3' A A1640 22.872 47.745 135.143 1.00 64.51 O
ATOM 11 C2' A A1640 25.176 48.192 135.819 1.00 64.87 C
ATOM 12 O2' A A1640 25.536 47.068 135.020 1.00 64.06 O
ATOM 13 C1' A A1640 26.089 49.348 135.453 1.00 65.11 C
ATOM 14 N9 A A1640 26.352 50.260 136.583 1.00 65.97 N
ATOM 15 C8 A A1640 25.830 51.528 136.696 1.00 66.56 C
ATOM 16 N7 A A1640 26.268 52.201 137.736 1.00 67.30 N
ATOM 17 C5 A A1640 27.161 51.328 138.347 1.00 67.19 C
ATOM 18 C6 A A1640 27.950 51.447 139.500 1.00 67.76 C
ATOM 19 N6 A A1640 27.988 52.521 140.285 1.00 68.58 N
ATOM 20 N1 A A1640 28.714 50.391 139.827 1.00 67.46 N
ATOM 21 C2 A A1640 28.695 49.299 139.062 1.00 66.66 C
ATOM 22 N3 A A1640 27.995 49.075 137.964 1.00 66.08 N
ATOM 23 C4 A A1640 27.234 50.131 137.645 1.00 66.38 C
ATOM 24 P A A1641 21.782 47.350 136.237 1.00 72.30 P
ATOM 25 OP1 A A1641 20.667 46.687 135.503 1.00 71.79 O
ATOM 26 OP2 A A1641 21.498 48.576 137.040 1.00 73.15 O
ATOM 27 O5' A A1641 22.541 46.284 137.139 1.00 72.26 O
TER

ATOM 1 O3' G B1691 25.136 56.894 148.049 1.00 77.45 O
ATOM 2 P G B1692 26.229 57.475 147.016 1.00 78.26 P
ATOM 3 OP1 G B1692 27.401 57.891 147.830 1.00 78.84 O
ATOM 4 OP2 G B1692 25.550 58.496 146.170 1.00 78.31 O
ATOM 5 O5' G B1692 26.602 56.209 146.125 1.00 77.22 O
ATOM 6 C5' G B1692 27.170 55.046 146.703 1.00 76.99 C
ATOM 7 C4' G B1692 27.386 53.967 145.670 1.00 75.98 C
ATOM 8 O4' G B1692 26.110 53.461 145.209 1.00 75.57 O
ATOM 9 C3' G B1692 28.084 54.398 144.397 1.00 75.49 C
ATOM 10 O3' G B1692 29.489 54.508 144.539 1.00 75.57 O
ATOM 11 C2' G B1692 27.636 53.336 143.395 1.00 74.55 C
ATOM 12 O2' G B1692 28.367 52.117 143.558 1.00 74.10 O
ATOM 13 C1' G B1692 26.195 53.105 143.845 1.00 74.73 C
ATOM 14 N9 G B1692 25.226 53.919 143.072 1.00 74.72 N
ATOM 15 C8 G B1692 24.825 55.213 143.262 1.00 75.39 C
ATOM 16 N7 G B1692 23.944 55.618 142.390 1.00 75.18 N
ATOM 17 C5 G B1692 23.748 54.532 141.572 1.00 74.32 C
ATOM 18 C6 G B1692 22.918 54.365 140.441 1.00 73.74 C
ATOM 19 O6 G B1692 22.140 55.154 139.883 1.00 73.86 O
ATOM 20 N1 G B1692 23.057 53.091 139.920 1.00 72.94 N
ATOM 21 C2 G B1692 23.862 52.104 140.397 1.00 72.72 C
ATOM 22 N2 G B1692 23.807 50.958 139.725 1.00 71.93 N
ATOM 23 N3 G B1692 24.641 52.240 141.436 1.00 73.24 N
ATOM 24 C4 G B1692 24.528 53.475 141.973 1.00 74.02 C
ATOM 25 P A B1693 30.335 55.415 143.513 1.00 77.08 P
ATOM 26 OP1 A B1693 30.213 54.771 142.172 1.00 76.13 O
ATOM 27 OP2 A B1693 31.699 55.610 144.099 1.00 77.44 O
ATOM 28 O5' A B1693 29.552 56.805 143.532 1.00 77.72 O
TER

Atoms:
OP1: (20.694,52.414,134.644)
OP2: (21.851,52.857,136.867)
C3': (23.818,48.741,135.409)
C1': (26.089,49.348,135.453)
C5': (23.210,50.752,133.989)
O4': (25.466,50.089,134.429)
C8: (25.830,51.528,136.696)
O2': (25.536,47.068,135.020)
C6: (27.950,51.447,139.500)
C5: (27.161,51.328,138.347)
C4: (27.234,50.131,137.645)
P: (21.943,52.540,135.433)
C4': (24.130,49.593,134.188)
C2': (25.176,48.192,135.819)
C2: (28.695,49.299,139.062)
N1: (28.714,50.391,139.827)
N3: (27.995,49.075,137.964)
N6: (27.988,52.521,140.285)
N7: (26.268,52.201,137.736)
N9: (26.352,50.260,136.583)
O5': (22.842,51.253,135.251)
O3': (22.872,47.745,135.143)
OP1: (27.401,57.891,147.830)
OP2: (25.550,58.496,146.170)
C3': (28.084,54.398,144.397)
C1': (26.195,53.105,143.845)
C5': (27.170,55.046,146.703)
O6: (22.140,55.154,139.883)
O4': (26.110,53.461,145.209)
C8: (24.825,55.213,143.262)
C2: (23.862,52.104,140.397)
C6: (22.918,54.365,140.441)
C5: (23.748,54.532,141.572)
C4: (24.528,53.475,141.973)
P: (26.229,57.475,147.016)
C4': (27.386,53.967,145.670)
C2': (27.636,53.336,143.395)
O2': (28.367,52.117,143.558)
N1: (23.057,53.091,139.920)
N2: (23.807,50.958,139.725)
N3: (24.641,52.240,141.436)
N7: (23.944,55.618,142.390)
N9: (25.226,53.919,143.072)
O5': (26.602,56.209,146.125)
O3': (29.489,54.508,144.539)
Image (generated by PyMOL):
PyMOL image
show in jmol