Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0234:0252
Extra
PDB:
ATOM 1 O3' C A 233 92.464 112.252 -9.600 1.00 66.27 O
ATOM 2 P G A 234 93.964 112.822 -9.640 1.00 68.64 P
ATOM 3 OP1 G A 234 94.308 113.160 -11.055 1.00 69.45 O
ATOM 4 OP2 G A 234 94.832 111.882 -8.878 1.00 65.08 O
ATOM 5 O5' G A 234 93.828 114.177 -8.821 1.00 65.53 O
ATOM 6 C5' G A 234 92.656 114.997 -8.979 1.00 66.36 C
ATOM 7 C4' G A 234 92.688 116.138 -8.001 1.00 67.73 C
ATOM 8 O4' G A 234 92.480 115.628 -6.650 1.00 67.53 O
ATOM 9 C3' G A 234 94.012 116.894 -7.978 1.00 67.39 C
ATOM 10 O3' G A 234 93.787 118.281 -7.802 1.00 67.05 O
ATOM 11 C2' G A 234 94.729 116.282 -6.782 1.00 66.82 C
ATOM 12 O2' G A 234 95.701 117.130 -6.203 1.00 65.22 O
ATOM 13 C1' G A 234 93.562 116.015 -5.832 1.00 66.60 C
ATOM 14 N9 G A 234 93.845 114.943 -4.882 1.00 65.84 N
ATOM 15 C8 G A 234 94.436 113.732 -5.149 1.00 65.57 C
ATOM 16 N7 G A 234 94.665 113.027 -4.077 1.00 65.88 N
ATOM 17 C5 G A 234 94.174 113.808 -3.039 1.00 65.46 C
ATOM 18 C6 G A 234 94.168 113.577 -1.641 1.00 64.98 C
ATOM 19 O6 G A 234 94.629 112.615 -1.016 1.00 64.10 O
ATOM 20 N1 G A 234 93.556 114.621 -0.955 1.00 65.42 N
ATOM 21 C2 G A 234 93.026 115.747 -1.533 1.00 64.72 C
ATOM 22 N2 G A 234 92.461 116.632 -0.696 1.00 63.00 N
ATOM 23 N3 G A 234 93.044 115.984 -2.835 1.00 65.19 N
ATOM 24 C4 G A 234 93.632 114.978 -3.523 1.00 65.62 C
ATOM 25 P A A 235 94.329 119.306 -8.910 1.00 65.98 P
ATOM 26 OP1 A A 235 93.928 118.781 -10.245 1.00 66.98 O
ATOM 27 OP2 A A 235 95.765 119.566 -8.621 1.00 63.52 O
ATOM 28 O5' A A 235 93.505 120.633 -8.632 1.00 64.68 O
TER
ATOM 1 O3' U B 251 96.582 119.121 6.961 1.00 51.93 O
ATOM 2 P G B 252 95.342 118.297 6.358 1.00 51.33 P
ATOM 3 OP1 G B 252 94.144 118.574 7.185 1.00 52.32 O
ATOM 4 OP2 G B 252 95.756 116.901 6.106 1.00 49.84 O
ATOM 5 O5' G B 252 95.109 118.983 4.953 1.00 51.03 O
ATOM 6 C5' G B 252 94.647 120.327 4.876 1.00 52.33 C
ATOM 7 C4' G B 252 93.633 120.428 3.784 1.00 52.26 C
ATOM 8 O4' G B 252 94.299 120.104 2.534 1.00 51.81 O
ATOM 9 C3' G B 252 92.495 119.431 3.937 1.00 52.74 C
ATOM 10 O3' G B 252 91.276 119.976 3.484 1.00 53.66 O
ATOM 11 C2' G B 252 92.962 118.229 3.119 1.00 52.17 C
ATOM 12 O2' G B 252 91.917 117.454 2.563 1.00 50.48 O
ATOM 13 C1' G B 252 93.812 118.876 2.025 1.00 50.78 C
ATOM 14 N9 G B 252 94.961 118.034 1.696 1.00 48.13 N
ATOM 15 C8 G B 252 95.759 117.347 2.580 1.00 46.51 C
ATOM 16 N7 G B 252 96.670 116.622 1.994 1.00 46.08 N
ATOM 17 C5 G B 252 96.476 116.855 0.639 1.00 47.85 C
ATOM 18 C6 G B 252 97.166 116.335 -0.494 1.00 47.43 C
ATOM 19 O6 G B 252 98.118 115.535 -0.526 1.00 46.63 O
ATOM 20 N1 G B 252 96.647 116.843 -1.680 1.00 47.76 N
ATOM 21 C2 G B 252 95.614 117.741 -1.772 1.00 48.94 C
ATOM 22 N2 G B 252 95.271 118.125 -3.014 1.00 48.83 N
ATOM 23 N3 G B 252 94.964 118.231 -0.727 1.00 48.47 N
ATOM 24 C4 G B 252 95.440 117.743 0.438 1.00 47.82 C
ATOM 25 P U B 253 89.947 119.713 4.338 1.00 52.16 P
ATOM 26 OP1 U B 253 90.208 120.153 5.729 1.00 53.60 O
ATOM 27 OP2 U B 253 89.531 118.318 4.080 1.00 53.79 O
ATOM 28 O5' U B 253 88.869 120.683 3.684 1.00 52.72 O
TER
ATOM 2 P G A 234 93.964 112.822 -9.640 1.00 68.64 P
ATOM 3 OP1 G A 234 94.308 113.160 -11.055 1.00 69.45 O
ATOM 4 OP2 G A 234 94.832 111.882 -8.878 1.00 65.08 O
ATOM 5 O5' G A 234 93.828 114.177 -8.821 1.00 65.53 O
ATOM 6 C5' G A 234 92.656 114.997 -8.979 1.00 66.36 C
ATOM 7 C4' G A 234 92.688 116.138 -8.001 1.00 67.73 C
ATOM 8 O4' G A 234 92.480 115.628 -6.650 1.00 67.53 O
ATOM 9 C3' G A 234 94.012 116.894 -7.978 1.00 67.39 C
ATOM 10 O3' G A 234 93.787 118.281 -7.802 1.00 67.05 O
ATOM 11 C2' G A 234 94.729 116.282 -6.782 1.00 66.82 C
ATOM 12 O2' G A 234 95.701 117.130 -6.203 1.00 65.22 O
ATOM 13 C1' G A 234 93.562 116.015 -5.832 1.00 66.60 C
ATOM 14 N9 G A 234 93.845 114.943 -4.882 1.00 65.84 N
ATOM 15 C8 G A 234 94.436 113.732 -5.149 1.00 65.57 C
ATOM 16 N7 G A 234 94.665 113.027 -4.077 1.00 65.88 N
ATOM 17 C5 G A 234 94.174 113.808 -3.039 1.00 65.46 C
ATOM 18 C6 G A 234 94.168 113.577 -1.641 1.00 64.98 C
ATOM 19 O6 G A 234 94.629 112.615 -1.016 1.00 64.10 O
ATOM 20 N1 G A 234 93.556 114.621 -0.955 1.00 65.42 N
ATOM 21 C2 G A 234 93.026 115.747 -1.533 1.00 64.72 C
ATOM 22 N2 G A 234 92.461 116.632 -0.696 1.00 63.00 N
ATOM 23 N3 G A 234 93.044 115.984 -2.835 1.00 65.19 N
ATOM 24 C4 G A 234 93.632 114.978 -3.523 1.00 65.62 C
ATOM 25 P A A 235 94.329 119.306 -8.910 1.00 65.98 P
ATOM 26 OP1 A A 235 93.928 118.781 -10.245 1.00 66.98 O
ATOM 27 OP2 A A 235 95.765 119.566 -8.621 1.00 63.52 O
ATOM 28 O5' A A 235 93.505 120.633 -8.632 1.00 64.68 O
TER
ATOM 1 O3' U B 251 96.582 119.121 6.961 1.00 51.93 O
ATOM 2 P G B 252 95.342 118.297 6.358 1.00 51.33 P
ATOM 3 OP1 G B 252 94.144 118.574 7.185 1.00 52.32 O
ATOM 4 OP2 G B 252 95.756 116.901 6.106 1.00 49.84 O
ATOM 5 O5' G B 252 95.109 118.983 4.953 1.00 51.03 O
ATOM 6 C5' G B 252 94.647 120.327 4.876 1.00 52.33 C
ATOM 7 C4' G B 252 93.633 120.428 3.784 1.00 52.26 C
ATOM 8 O4' G B 252 94.299 120.104 2.534 1.00 51.81 O
ATOM 9 C3' G B 252 92.495 119.431 3.937 1.00 52.74 C
ATOM 10 O3' G B 252 91.276 119.976 3.484 1.00 53.66 O
ATOM 11 C2' G B 252 92.962 118.229 3.119 1.00 52.17 C
ATOM 12 O2' G B 252 91.917 117.454 2.563 1.00 50.48 O
ATOM 13 C1' G B 252 93.812 118.876 2.025 1.00 50.78 C
ATOM 14 N9 G B 252 94.961 118.034 1.696 1.00 48.13 N
ATOM 15 C8 G B 252 95.759 117.347 2.580 1.00 46.51 C
ATOM 16 N7 G B 252 96.670 116.622 1.994 1.00 46.08 N
ATOM 17 C5 G B 252 96.476 116.855 0.639 1.00 47.85 C
ATOM 18 C6 G B 252 97.166 116.335 -0.494 1.00 47.43 C
ATOM 19 O6 G B 252 98.118 115.535 -0.526 1.00 46.63 O
ATOM 20 N1 G B 252 96.647 116.843 -1.680 1.00 47.76 N
ATOM 21 C2 G B 252 95.614 117.741 -1.772 1.00 48.94 C
ATOM 22 N2 G B 252 95.271 118.125 -3.014 1.00 48.83 N
ATOM 23 N3 G B 252 94.964 118.231 -0.727 1.00 48.47 N
ATOM 24 C4 G B 252 95.440 117.743 0.438 1.00 47.82 C
ATOM 25 P U B 253 89.947 119.713 4.338 1.00 52.16 P
ATOM 26 OP1 U B 253 90.208 120.153 5.729 1.00 53.60 O
ATOM 27 OP2 U B 253 89.531 118.318 4.080 1.00 53.79 O
ATOM 28 O5' U B 253 88.869 120.683 3.684 1.00 52.72 O
TER
Atoms:
OP1: (94.308,113.160,-11.055)
OP2: (94.832,111.882,-8.878)
C3': (94.012,116.894,-7.978)
C1': (93.562,116.015,-5.832)
C5': (92.656,114.997,-8.979)
O6: (94.629,112.615,-1.016)
O4': (92.480,115.628,-6.650)
C8: (94.436,113.732,-5.149)
C2: (93.026,115.747,-1.533)
C6: (94.168,113.577,-1.641)
C5: (94.174,113.808,-3.039)
C4: (93.632,114.978,-3.523)
P: (93.964,112.822,-9.640)
C4': (92.688,116.138,-8.001)
C2': (94.729,116.282,-6.782)
O2': (95.701,117.130,-6.203)
N1: (93.556,114.621,-0.955)
N2: (92.461,116.632,-0.696)
N3: (93.044,115.984,-2.835)
N7: (94.665,113.027,-4.077)
N9: (93.845,114.943,-4.882)
O5': (93.828,114.177,-8.821)
O3': (93.787,118.281,-7.802)
OP2: (94.832,111.882,-8.878)
C3': (94.012,116.894,-7.978)
C1': (93.562,116.015,-5.832)
C5': (92.656,114.997,-8.979)
O6: (94.629,112.615,-1.016)
O4': (92.480,115.628,-6.650)
C8: (94.436,113.732,-5.149)
C2: (93.026,115.747,-1.533)
C6: (94.168,113.577,-1.641)
C5: (94.174,113.808,-3.039)
C4: (93.632,114.978,-3.523)
P: (93.964,112.822,-9.640)
C4': (92.688,116.138,-8.001)
C2': (94.729,116.282,-6.782)
O2': (95.701,117.130,-6.203)
N1: (93.556,114.621,-0.955)
N2: (92.461,116.632,-0.696)
N3: (93.044,115.984,-2.835)
N7: (94.665,113.027,-4.077)
N9: (93.845,114.943,-4.882)
O5': (93.828,114.177,-8.821)
O3': (93.787,118.281,-7.802)
OP1: (94.144,118.574,7.185)
OP2: (95.756,116.901,6.106)
C3': (92.495,119.431,3.937)
C1': (93.812,118.876,2.025)
C5': (94.647,120.327,4.876)
O6: (98.118,115.535,-0.526)
O4': (94.299,120.104,2.534)
C8: (95.759,117.347,2.580)
C2: (95.614,117.741,-1.772)
C6: (97.166,116.335,-0.494)
C5: (96.476,116.855,0.639)
C4: (95.440,117.743,0.438)
P: (95.342,118.297,6.358)
C4': (93.633,120.428,3.784)
C2': (92.962,118.229,3.119)
O2': (91.917,117.454,2.563)
N1: (96.647,116.843,-1.680)
N2: (95.271,118.125,-3.014)
N3: (94.964,118.231,-0.727)
N7: (96.670,116.622,1.994)
N9: (94.961,118.034,1.696)
O5': (95.109,118.983,4.953)
O3': (91.276,119.976,3.484)
OP2: (95.756,116.901,6.106)
C3': (92.495,119.431,3.937)
C1': (93.812,118.876,2.025)
C5': (94.647,120.327,4.876)
O6: (98.118,115.535,-0.526)
O4': (94.299,120.104,2.534)
C8: (95.759,117.347,2.580)
C2: (95.614,117.741,-1.772)
C6: (97.166,116.335,-0.494)
C5: (96.476,116.855,0.639)
C4: (95.440,117.743,0.438)
P: (95.342,118.297,6.358)
C4': (93.633,120.428,3.784)
C2': (92.962,118.229,3.119)
O2': (91.917,117.454,2.563)
N1: (96.647,116.843,-1.680)
N2: (95.271,118.125,-3.014)
N3: (94.964,118.231,-0.727)
N7: (96.670,116.622,1.994)
N9: (94.961,118.034,1.696)
O5': (95.109,118.983,4.953)
O3': (91.276,119.976,3.484)
Image (generated by PyMOL):