Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:0234:0252
Extra
PDB:
ATOM 1 O3' C A 233 92.624 112.067 -9.518 1.00 72.19 O
ATOM 2 P G A 234 94.125 112.627 -9.599 1.00 73.66 P
ATOM 3 OP1 G A 234 94.413 112.951 -11.027 1.00 75.02 O
ATOM 4 OP2 G A 234 95.006 111.678 -8.868 1.00 70.76 O
ATOM 5 O5' G A 234 94.026 113.984 -8.777 1.00 71.21 O
ATOM 6 C5' G A 234 92.868 114.829 -8.925 1.00 72.60 C
ATOM 7 C4' G A 234 92.923 115.974 -7.948 1.00 73.61 C
ATOM 8 O4' G A 234 92.709 115.475 -6.596 1.00 74.71 O
ATOM 9 C3' G A 234 94.247 116.728 -7.924 1.00 72.75 C
ATOM 10 O3' G A 234 94.015 118.111 -7.731 1.00 71.84 O
ATOM 11 C2' G A 234 94.963 116.114 -6.729 1.00 72.65 C
ATOM 12 O2' G A 234 95.931 116.964 -6.150 1.00 71.06 O
ATOM 13 C1' G A 234 93.796 115.847 -5.779 1.00 73.31 C
ATOM 14 N9 G A 234 94.072 114.762 -4.842 1.00 73.38 N
ATOM 15 C8 G A 234 94.638 113.543 -5.128 1.00 72.93 C
ATOM 16 N7 G A 234 94.858 112.820 -4.065 1.00 74.55 N
ATOM 17 C5 G A 234 94.390 113.599 -3.014 1.00 74.35 C
ATOM 18 C6 G A 234 94.388 113.354 -1.615 1.00 74.06 C
ATOM 19 O6 G A 234 94.837 112.376 -1.003 1.00 73.04 O
ATOM 20 N1 G A 234 93.798 114.401 -0.914 1.00 74.02 N
ATOM 21 C2 G A 234 93.284 115.541 -1.480 1.00 73.19 C
ATOM 22 N2 G A 234 92.732 116.425 -0.635 1.00 72.98 N
ATOM 23 N3 G A 234 93.304 115.794 -2.778 1.00 73.22 N
ATOM 24 C4 G A 234 93.869 114.786 -3.481 1.00 73.66 C
ATOM 25 P A A 235 94.509 119.151 -8.849 1.00 68.99 P
ATOM 26 OP1 A A 235 94.058 118.616 -10.163 1.00 69.70 O
ATOM 27 OP2 A A 235 95.954 119.412 -8.616 1.00 66.68 O
ATOM 28 O5' A A 235 93.688 120.474 -8.530 1.00 66.65 O
TER
ATOM 1 O3' U B 251 96.792 118.915 6.938 1.00 56.61 O
ATOM 2 P G B 252 95.519 118.170 6.303 1.00 54.90 P
ATOM 3 OP1 G B 252 94.310 118.477 7.102 1.00 56.00 O
ATOM 4 OP2 G B 252 95.876 116.763 6.022 1.00 55.37 O
ATOM 5 O5' G B 252 95.349 118.896 4.910 1.00 57.04 O
ATOM 6 C5' G B 252 94.854 120.231 4.843 1.00 57.28 C
ATOM 7 C4' G B 252 93.832 120.311 3.756 1.00 57.40 C
ATOM 8 O4' G B 252 94.494 119.965 2.507 1.00 57.65 O
ATOM 9 C3' G B 252 92.694 119.315 3.933 1.00 57.70 C
ATOM 10 O3' G B 252 91.469 119.855 3.474 1.00 57.95 O
ATOM 11 C2' G B 252 93.156 118.103 3.125 1.00 57.82 C
ATOM 12 O2' G B 252 92.104 117.328 2.585 1.00 56.46 O
ATOM 13 C1' G B 252 93.993 118.736 2.011 1.00 57.80 C
ATOM 14 N9 G B 252 95.130 117.881 1.672 1.00 57.78 N
ATOM 15 C8 G B 252 95.908 117.166 2.553 1.00 57.92 C
ATOM 16 N7 G B 252 96.807 116.428 1.965 1.00 58.14 N
ATOM 17 C5 G B 252 96.628 116.679 0.611 1.00 59.30 C
ATOM 18 C6 G B 252 97.311 116.148 -0.522 1.00 59.95 C
ATOM 19 O6 G B 252 98.235 115.309 -0.553 1.00 59.14 O
ATOM 20 N1 G B 252 96.822 116.688 -1.709 1.00 59.72 N
ATOM 21 C2 G B 252 95.813 117.616 -1.800 1.00 60.09 C
ATOM 22 N2 G B 252 95.500 118.031 -3.040 1.00 58.74 N
ATOM 23 N3 G B 252 95.161 118.107 -0.754 1.00 60.15 N
ATOM 24 C4 G B 252 95.615 117.596 0.412 1.00 59.04 C
ATOM 25 P U B 253 90.140 119.628 4.344 1.00 54.29 P
ATOM 26 OP1 U B 253 90.408 120.139 5.711 1.00 56.87 O
ATOM 27 OP2 U B 253 89.725 118.220 4.159 1.00 56.34 O
ATOM 28 O5' U B 253 89.064 120.575 3.650 1.00 56.13 O
TER
ATOM 2 P G A 234 94.125 112.627 -9.599 1.00 73.66 P
ATOM 3 OP1 G A 234 94.413 112.951 -11.027 1.00 75.02 O
ATOM 4 OP2 G A 234 95.006 111.678 -8.868 1.00 70.76 O
ATOM 5 O5' G A 234 94.026 113.984 -8.777 1.00 71.21 O
ATOM 6 C5' G A 234 92.868 114.829 -8.925 1.00 72.60 C
ATOM 7 C4' G A 234 92.923 115.974 -7.948 1.00 73.61 C
ATOM 8 O4' G A 234 92.709 115.475 -6.596 1.00 74.71 O
ATOM 9 C3' G A 234 94.247 116.728 -7.924 1.00 72.75 C
ATOM 10 O3' G A 234 94.015 118.111 -7.731 1.00 71.84 O
ATOM 11 C2' G A 234 94.963 116.114 -6.729 1.00 72.65 C
ATOM 12 O2' G A 234 95.931 116.964 -6.150 1.00 71.06 O
ATOM 13 C1' G A 234 93.796 115.847 -5.779 1.00 73.31 C
ATOM 14 N9 G A 234 94.072 114.762 -4.842 1.00 73.38 N
ATOM 15 C8 G A 234 94.638 113.543 -5.128 1.00 72.93 C
ATOM 16 N7 G A 234 94.858 112.820 -4.065 1.00 74.55 N
ATOM 17 C5 G A 234 94.390 113.599 -3.014 1.00 74.35 C
ATOM 18 C6 G A 234 94.388 113.354 -1.615 1.00 74.06 C
ATOM 19 O6 G A 234 94.837 112.376 -1.003 1.00 73.04 O
ATOM 20 N1 G A 234 93.798 114.401 -0.914 1.00 74.02 N
ATOM 21 C2 G A 234 93.284 115.541 -1.480 1.00 73.19 C
ATOM 22 N2 G A 234 92.732 116.425 -0.635 1.00 72.98 N
ATOM 23 N3 G A 234 93.304 115.794 -2.778 1.00 73.22 N
ATOM 24 C4 G A 234 93.869 114.786 -3.481 1.00 73.66 C
ATOM 25 P A A 235 94.509 119.151 -8.849 1.00 68.99 P
ATOM 26 OP1 A A 235 94.058 118.616 -10.163 1.00 69.70 O
ATOM 27 OP2 A A 235 95.954 119.412 -8.616 1.00 66.68 O
ATOM 28 O5' A A 235 93.688 120.474 -8.530 1.00 66.65 O
TER
ATOM 1 O3' U B 251 96.792 118.915 6.938 1.00 56.61 O
ATOM 2 P G B 252 95.519 118.170 6.303 1.00 54.90 P
ATOM 3 OP1 G B 252 94.310 118.477 7.102 1.00 56.00 O
ATOM 4 OP2 G B 252 95.876 116.763 6.022 1.00 55.37 O
ATOM 5 O5' G B 252 95.349 118.896 4.910 1.00 57.04 O
ATOM 6 C5' G B 252 94.854 120.231 4.843 1.00 57.28 C
ATOM 7 C4' G B 252 93.832 120.311 3.756 1.00 57.40 C
ATOM 8 O4' G B 252 94.494 119.965 2.507 1.00 57.65 O
ATOM 9 C3' G B 252 92.694 119.315 3.933 1.00 57.70 C
ATOM 10 O3' G B 252 91.469 119.855 3.474 1.00 57.95 O
ATOM 11 C2' G B 252 93.156 118.103 3.125 1.00 57.82 C
ATOM 12 O2' G B 252 92.104 117.328 2.585 1.00 56.46 O
ATOM 13 C1' G B 252 93.993 118.736 2.011 1.00 57.80 C
ATOM 14 N9 G B 252 95.130 117.881 1.672 1.00 57.78 N
ATOM 15 C8 G B 252 95.908 117.166 2.553 1.00 57.92 C
ATOM 16 N7 G B 252 96.807 116.428 1.965 1.00 58.14 N
ATOM 17 C5 G B 252 96.628 116.679 0.611 1.00 59.30 C
ATOM 18 C6 G B 252 97.311 116.148 -0.522 1.00 59.95 C
ATOM 19 O6 G B 252 98.235 115.309 -0.553 1.00 59.14 O
ATOM 20 N1 G B 252 96.822 116.688 -1.709 1.00 59.72 N
ATOM 21 C2 G B 252 95.813 117.616 -1.800 1.00 60.09 C
ATOM 22 N2 G B 252 95.500 118.031 -3.040 1.00 58.74 N
ATOM 23 N3 G B 252 95.161 118.107 -0.754 1.00 60.15 N
ATOM 24 C4 G B 252 95.615 117.596 0.412 1.00 59.04 C
ATOM 25 P U B 253 90.140 119.628 4.344 1.00 54.29 P
ATOM 26 OP1 U B 253 90.408 120.139 5.711 1.00 56.87 O
ATOM 27 OP2 U B 253 89.725 118.220 4.159 1.00 56.34 O
ATOM 28 O5' U B 253 89.064 120.575 3.650 1.00 56.13 O
TER
Atoms:
OP1: (94.413,112.951,-11.027)
OP2: (95.006,111.678,-8.868)
C3': (94.247,116.728,-7.924)
C1': (93.796,115.847,-5.779)
C5': (92.868,114.829,-8.925)
O6: (94.837,112.376,-1.003)
O4': (92.709,115.475,-6.596)
C8: (94.638,113.543,-5.128)
C2: (93.284,115.541,-1.480)
C6: (94.388,113.354,-1.615)
C5: (94.390,113.599,-3.014)
C4: (93.869,114.786,-3.481)
P: (94.125,112.627,-9.599)
C4': (92.923,115.974,-7.948)
C2': (94.963,116.114,-6.729)
O2': (95.931,116.964,-6.150)
N1: (93.798,114.401,-0.914)
N2: (92.732,116.425,-0.635)
N3: (93.304,115.794,-2.778)
N7: (94.858,112.820,-4.065)
N9: (94.072,114.762,-4.842)
O5': (94.026,113.984,-8.777)
O3': (94.015,118.111,-7.731)
OP2: (95.006,111.678,-8.868)
C3': (94.247,116.728,-7.924)
C1': (93.796,115.847,-5.779)
C5': (92.868,114.829,-8.925)
O6: (94.837,112.376,-1.003)
O4': (92.709,115.475,-6.596)
C8: (94.638,113.543,-5.128)
C2: (93.284,115.541,-1.480)
C6: (94.388,113.354,-1.615)
C5: (94.390,113.599,-3.014)
C4: (93.869,114.786,-3.481)
P: (94.125,112.627,-9.599)
C4': (92.923,115.974,-7.948)
C2': (94.963,116.114,-6.729)
O2': (95.931,116.964,-6.150)
N1: (93.798,114.401,-0.914)
N2: (92.732,116.425,-0.635)
N3: (93.304,115.794,-2.778)
N7: (94.858,112.820,-4.065)
N9: (94.072,114.762,-4.842)
O5': (94.026,113.984,-8.777)
O3': (94.015,118.111,-7.731)
OP1: (94.310,118.477,7.102)
OP2: (95.876,116.763,6.022)
C3': (92.694,119.315,3.933)
C1': (93.993,118.736,2.011)
C5': (94.854,120.231,4.843)
O6: (98.235,115.309,-0.553)
O4': (94.494,119.965,2.507)
C8: (95.908,117.166,2.553)
C2: (95.813,117.616,-1.800)
C6: (97.311,116.148,-0.522)
C5: (96.628,116.679,0.611)
C4: (95.615,117.596,0.412)
P: (95.519,118.170,6.303)
C4': (93.832,120.311,3.756)
C2': (93.156,118.103,3.125)
O2': (92.104,117.328,2.585)
N1: (96.822,116.688,-1.709)
N2: (95.500,118.031,-3.040)
N3: (95.161,118.107,-0.754)
N7: (96.807,116.428,1.965)
N9: (95.130,117.881,1.672)
O5': (95.349,118.896,4.910)
O3': (91.469,119.855,3.474)
OP2: (95.876,116.763,6.022)
C3': (92.694,119.315,3.933)
C1': (93.993,118.736,2.011)
C5': (94.854,120.231,4.843)
O6: (98.235,115.309,-0.553)
O4': (94.494,119.965,2.507)
C8: (95.908,117.166,2.553)
C2: (95.813,117.616,-1.800)
C6: (97.311,116.148,-0.522)
C5: (96.628,116.679,0.611)
C4: (95.615,117.596,0.412)
P: (95.519,118.170,6.303)
C4': (93.832,120.311,3.756)
C2': (93.156,118.103,3.125)
O2': (92.104,117.328,2.585)
N1: (96.822,116.688,-1.709)
N2: (95.500,118.031,-3.040)
N3: (95.161,118.107,-0.754)
N7: (96.807,116.428,1.965)
N9: (95.130,117.881,1.672)
O5': (95.349,118.896,4.910)
O3': (91.469,119.855,3.474)
Image (generated by PyMOL):