Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ7:0234:0252
Extra
PDB:
ATOM 1 O3' C A 233 92.235 112.117 -9.675 1.00 62.50 O
ATOM 2 P G A 234 93.729 112.703 -9.767 1.00 63.75 P
ATOM 3 OP1 G A 234 93.994 113.074 -11.186 1.00 65.42 O
ATOM 4 OP2 G A 234 94.644 111.754 -9.074 1.00 60.15 O
ATOM 5 O5' G A 234 93.622 114.046 -8.925 1.00 61.43 O
ATOM 6 C5' G A 234 92.481 114.907 -9.082 1.00 62.41 C
ATOM 7 C4' G A 234 92.556 116.055 -8.108 1.00 63.51 C
ATOM 8 O4' G A 234 92.349 115.553 -6.755 1.00 64.16 O
ATOM 9 C3' G A 234 93.896 116.783 -8.096 1.00 63.03 C
ATOM 10 O3' G A 234 93.703 118.174 -7.912 1.00 62.20 O
ATOM 11 C2' G A 234 94.613 116.154 -6.910 1.00 62.60 C
ATOM 12 O2' G A 234 95.604 116.981 -6.334 1.00 60.84 O
ATOM 13 C1' G A 234 93.452 115.902 -5.949 1.00 62.97 C
ATOM 14 N9 G A 234 93.727 114.808 -5.023 1.00 62.88 N
ATOM 15 C8 G A 234 94.316 113.602 -5.316 1.00 62.86 C
ATOM 16 N7 G A 234 94.549 112.877 -4.258 1.00 64.19 N
ATOM 17 C5 G A 234 94.059 113.638 -3.206 1.00 63.72 C
ATOM 18 C6 G A 234 94.063 113.386 -1.808 1.00 63.09 C
ATOM 19 O6 G A 234 94.545 112.421 -1.197 1.00 61.49 O
ATOM 20 N1 G A 234 93.441 114.411 -1.105 1.00 63.13 N
ATOM 21 C2 G A 234 92.902 115.540 -1.664 1.00 62.26 C
ATOM 22 N2 G A 234 92.327 116.403 -0.813 1.00 60.97 N
ATOM 23 N3 G A 234 92.921 115.802 -2.959 1.00 63.26 N
ATOM 24 C4 G A 234 93.511 114.814 -3.666 1.00 63.29 C
ATOM 25 P A A 235 94.240 119.191 -9.029 1.00 61.01 P
ATOM 26 OP1 A A 235 93.831 118.651 -10.359 1.00 63.00 O
ATOM 27 OP2 A A 235 95.675 119.444 -8.755 1.00 59.71 O
ATOM 28 O5' A A 235 93.418 120.524 -8.757 1.00 59.67 O
TER
ATOM 1 O3' U B 251 96.398 118.975 6.801 1.00 47.17 O
ATOM 2 P G B 252 95.150 118.183 6.179 1.00 46.17 P
ATOM 3 OP1 G B 252 93.937 118.487 6.963 1.00 46.31 O
ATOM 4 OP2 G B 252 95.545 116.776 5.947 1.00 44.46 O
ATOM 5 O5' G B 252 94.971 118.867 4.763 1.00 48.70 O
ATOM 6 C5' G B 252 94.509 120.215 4.656 1.00 49.08 C
ATOM 7 C4' G B 252 93.475 120.287 3.578 1.00 49.67 C
ATOM 8 O4' G B 252 94.115 119.932 2.322 1.00 50.01 O
ATOM 9 C3' G B 252 92.347 119.286 3.781 1.00 49.57 C
ATOM 10 O3' G B 252 91.120 119.797 3.316 1.00 48.05 O
ATOM 11 C2' G B 252 92.812 118.065 2.995 1.00 49.80 C
ATOM 12 O2' G B 252 91.753 117.273 2.495 1.00 50.46 O
ATOM 13 C1' G B 252 93.628 118.684 1.860 1.00 49.17 C
ATOM 14 N9 G B 252 94.778 117.843 1.532 1.00 47.88 N
ATOM 15 C8 G B 252 95.572 117.160 2.422 1.00 46.74 C
ATOM 16 N7 G B 252 96.488 116.434 1.845 1.00 45.24 N
ATOM 17 C5 G B 252 96.304 116.658 0.489 1.00 46.80 C
ATOM 18 C6 G B 252 97.001 116.128 -0.632 1.00 47.23 C
ATOM 19 O6 G B 252 97.953 115.318 -0.646 1.00 46.12 O
ATOM 20 N1 G B 252 96.494 116.628 -1.829 1.00 46.98 N
ATOM 21 C2 G B 252 95.461 117.527 -1.937 1.00 48.24 C
ATOM 22 N2 G B 252 95.133 117.903 -3.185 1.00 47.06 N
ATOM 23 N3 G B 252 94.799 118.024 -0.899 1.00 48.07 N
ATOM 24 C4 G B 252 95.267 117.545 0.275 1.00 47.74 C
ATOM 25 P U B 253 89.802 119.580 4.200 1.00 46.30 P
ATOM 26 OP1 U B 253 90.074 120.084 5.573 1.00 47.40 O
ATOM 27 OP2 U B 253 89.367 118.174 4.012 1.00 45.88 O
ATOM 28 O5' U B 253 88.730 120.536 3.521 1.00 45.80 O
TER
ATOM 2 P G A 234 93.729 112.703 -9.767 1.00 63.75 P
ATOM 3 OP1 G A 234 93.994 113.074 -11.186 1.00 65.42 O
ATOM 4 OP2 G A 234 94.644 111.754 -9.074 1.00 60.15 O
ATOM 5 O5' G A 234 93.622 114.046 -8.925 1.00 61.43 O
ATOM 6 C5' G A 234 92.481 114.907 -9.082 1.00 62.41 C
ATOM 7 C4' G A 234 92.556 116.055 -8.108 1.00 63.51 C
ATOM 8 O4' G A 234 92.349 115.553 -6.755 1.00 64.16 O
ATOM 9 C3' G A 234 93.896 116.783 -8.096 1.00 63.03 C
ATOM 10 O3' G A 234 93.703 118.174 -7.912 1.00 62.20 O
ATOM 11 C2' G A 234 94.613 116.154 -6.910 1.00 62.60 C
ATOM 12 O2' G A 234 95.604 116.981 -6.334 1.00 60.84 O
ATOM 13 C1' G A 234 93.452 115.902 -5.949 1.00 62.97 C
ATOM 14 N9 G A 234 93.727 114.808 -5.023 1.00 62.88 N
ATOM 15 C8 G A 234 94.316 113.602 -5.316 1.00 62.86 C
ATOM 16 N7 G A 234 94.549 112.877 -4.258 1.00 64.19 N
ATOM 17 C5 G A 234 94.059 113.638 -3.206 1.00 63.72 C
ATOM 18 C6 G A 234 94.063 113.386 -1.808 1.00 63.09 C
ATOM 19 O6 G A 234 94.545 112.421 -1.197 1.00 61.49 O
ATOM 20 N1 G A 234 93.441 114.411 -1.105 1.00 63.13 N
ATOM 21 C2 G A 234 92.902 115.540 -1.664 1.00 62.26 C
ATOM 22 N2 G A 234 92.327 116.403 -0.813 1.00 60.97 N
ATOM 23 N3 G A 234 92.921 115.802 -2.959 1.00 63.26 N
ATOM 24 C4 G A 234 93.511 114.814 -3.666 1.00 63.29 C
ATOM 25 P A A 235 94.240 119.191 -9.029 1.00 61.01 P
ATOM 26 OP1 A A 235 93.831 118.651 -10.359 1.00 63.00 O
ATOM 27 OP2 A A 235 95.675 119.444 -8.755 1.00 59.71 O
ATOM 28 O5' A A 235 93.418 120.524 -8.757 1.00 59.67 O
TER
ATOM 1 O3' U B 251 96.398 118.975 6.801 1.00 47.17 O
ATOM 2 P G B 252 95.150 118.183 6.179 1.00 46.17 P
ATOM 3 OP1 G B 252 93.937 118.487 6.963 1.00 46.31 O
ATOM 4 OP2 G B 252 95.545 116.776 5.947 1.00 44.46 O
ATOM 5 O5' G B 252 94.971 118.867 4.763 1.00 48.70 O
ATOM 6 C5' G B 252 94.509 120.215 4.656 1.00 49.08 C
ATOM 7 C4' G B 252 93.475 120.287 3.578 1.00 49.67 C
ATOM 8 O4' G B 252 94.115 119.932 2.322 1.00 50.01 O
ATOM 9 C3' G B 252 92.347 119.286 3.781 1.00 49.57 C
ATOM 10 O3' G B 252 91.120 119.797 3.316 1.00 48.05 O
ATOM 11 C2' G B 252 92.812 118.065 2.995 1.00 49.80 C
ATOM 12 O2' G B 252 91.753 117.273 2.495 1.00 50.46 O
ATOM 13 C1' G B 252 93.628 118.684 1.860 1.00 49.17 C
ATOM 14 N9 G B 252 94.778 117.843 1.532 1.00 47.88 N
ATOM 15 C8 G B 252 95.572 117.160 2.422 1.00 46.74 C
ATOM 16 N7 G B 252 96.488 116.434 1.845 1.00 45.24 N
ATOM 17 C5 G B 252 96.304 116.658 0.489 1.00 46.80 C
ATOM 18 C6 G B 252 97.001 116.128 -0.632 1.00 47.23 C
ATOM 19 O6 G B 252 97.953 115.318 -0.646 1.00 46.12 O
ATOM 20 N1 G B 252 96.494 116.628 -1.829 1.00 46.98 N
ATOM 21 C2 G B 252 95.461 117.527 -1.937 1.00 48.24 C
ATOM 22 N2 G B 252 95.133 117.903 -3.185 1.00 47.06 N
ATOM 23 N3 G B 252 94.799 118.024 -0.899 1.00 48.07 N
ATOM 24 C4 G B 252 95.267 117.545 0.275 1.00 47.74 C
ATOM 25 P U B 253 89.802 119.580 4.200 1.00 46.30 P
ATOM 26 OP1 U B 253 90.074 120.084 5.573 1.00 47.40 O
ATOM 27 OP2 U B 253 89.367 118.174 4.012 1.00 45.88 O
ATOM 28 O5' U B 253 88.730 120.536 3.521 1.00 45.80 O
TER
Atoms:
OP1: (93.994,113.074,-11.186)
OP2: (94.644,111.754,-9.074)
C3': (93.896,116.783,-8.096)
C1': (93.452,115.902,-5.949)
C5': (92.481,114.907,-9.082)
O6: (94.545,112.421,-1.197)
O4': (92.349,115.553,-6.755)
C8: (94.316,113.602,-5.316)
C2: (92.902,115.540,-1.664)
C6: (94.063,113.386,-1.808)
C5: (94.059,113.638,-3.206)
C4: (93.511,114.814,-3.666)
P: (93.729,112.703,-9.767)
C4': (92.556,116.055,-8.108)
C2': (94.613,116.154,-6.910)
O2': (95.604,116.981,-6.334)
N1: (93.441,114.411,-1.105)
N2: (92.327,116.403,-0.813)
N3: (92.921,115.802,-2.959)
N7: (94.549,112.877,-4.258)
N9: (93.727,114.808,-5.023)
O5': (93.622,114.046,-8.925)
O3': (93.703,118.174,-7.912)
OP2: (94.644,111.754,-9.074)
C3': (93.896,116.783,-8.096)
C1': (93.452,115.902,-5.949)
C5': (92.481,114.907,-9.082)
O6: (94.545,112.421,-1.197)
O4': (92.349,115.553,-6.755)
C8: (94.316,113.602,-5.316)
C2: (92.902,115.540,-1.664)
C6: (94.063,113.386,-1.808)
C5: (94.059,113.638,-3.206)
C4: (93.511,114.814,-3.666)
P: (93.729,112.703,-9.767)
C4': (92.556,116.055,-8.108)
C2': (94.613,116.154,-6.910)
O2': (95.604,116.981,-6.334)
N1: (93.441,114.411,-1.105)
N2: (92.327,116.403,-0.813)
N3: (92.921,115.802,-2.959)
N7: (94.549,112.877,-4.258)
N9: (93.727,114.808,-5.023)
O5': (93.622,114.046,-8.925)
O3': (93.703,118.174,-7.912)
OP1: (93.937,118.487,6.963)
OP2: (95.545,116.776,5.947)
C3': (92.347,119.286,3.781)
C1': (93.628,118.684,1.860)
C5': (94.509,120.215,4.656)
O6: (97.953,115.318,-0.646)
O4': (94.115,119.932,2.322)
C8: (95.572,117.160,2.422)
C2: (95.461,117.527,-1.937)
C6: (97.001,116.128,-0.632)
C5: (96.304,116.658,0.489)
C4: (95.267,117.545,0.275)
P: (95.150,118.183,6.179)
C4': (93.475,120.287,3.578)
C2': (92.812,118.065,2.995)
O2': (91.753,117.273,2.495)
N1: (96.494,116.628,-1.829)
N2: (95.133,117.903,-3.185)
N3: (94.799,118.024,-0.899)
N7: (96.488,116.434,1.845)
N9: (94.778,117.843,1.532)
O5': (94.971,118.867,4.763)
O3': (91.120,119.797,3.316)
OP2: (95.545,116.776,5.947)
C3': (92.347,119.286,3.781)
C1': (93.628,118.684,1.860)
C5': (94.509,120.215,4.656)
O6: (97.953,115.318,-0.646)
O4': (94.115,119.932,2.322)
C8: (95.572,117.160,2.422)
C2: (95.461,117.527,-1.937)
C6: (97.001,116.128,-0.632)
C5: (96.304,116.658,0.489)
C4: (95.267,117.545,0.275)
P: (95.150,118.183,6.179)
C4': (93.475,120.287,3.578)
C2': (92.812,118.065,2.995)
O2': (91.753,117.273,2.495)
N1: (96.494,116.628,-1.829)
N2: (95.133,117.903,-3.185)
N3: (94.799,118.024,-0.899)
N7: (96.488,116.434,1.845)
N9: (94.778,117.843,1.532)
O5': (94.971,118.867,4.763)
O3': (91.120,119.797,3.316)
Image (generated by PyMOL):