Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0234:0252
Extra
PDB:
ATOM 1 O3' C A 233 92.136 111.156 -9.901 1.00 55.43 O
ATOM 2 P G A 234 93.617 111.768 -9.981 1.00 56.38 P
ATOM 3 OP1 G A 234 93.901 112.114 -11.409 1.00 58.36 O
ATOM 4 OP2 G A 234 94.533 110.845 -9.251 1.00 53.37 O
ATOM 5 O5' G A 234 93.471 113.124 -9.159 1.00 55.32 O
ATOM 6 C5' G A 234 92.328 113.978 -9.364 1.00 55.00 C
ATOM 7 C4' G A 234 92.383 115.158 -8.428 1.00 55.91 C
ATOM 8 O4' G A 234 92.120 114.712 -7.067 1.00 56.64 O
ATOM 9 C3' G A 234 93.723 115.880 -8.393 1.00 55.92 C
ATOM 10 O3' G A 234 93.516 117.271 -8.263 1.00 57.28 O
ATOM 11 C2' G A 234 94.395 115.295 -7.157 1.00 55.66 C
ATOM 12 O2' G A 234 95.345 116.149 -6.550 1.00 55.36 O
ATOM 13 C1' G A 234 93.202 115.067 -6.233 1.00 55.49 C
ATOM 14 N9 G A 234 93.451 113.973 -5.299 1.00 54.94 N
ATOM 15 C8 G A 234 94.028 112.759 -5.586 1.00 55.65 C
ATOM 16 N7 G A 234 94.200 112.011 -4.532 1.00 57.07 N
ATOM 17 C5 G A 234 93.689 112.770 -3.487 1.00 56.00 C
ATOM 18 C6 G A 234 93.618 112.488 -2.098 1.00 55.76 C
ATOM 19 O6 G A 234 94.020 111.484 -1.494 1.00 55.07 O
ATOM 20 N1 G A 234 93.017 113.527 -1.397 1.00 55.28 N
ATOM 21 C2 G A 234 92.551 114.691 -1.956 1.00 55.96 C
ATOM 22 N2 G A 234 92.001 115.575 -1.108 1.00 56.21 N
ATOM 23 N3 G A 234 92.620 114.970 -3.248 1.00 55.38 N
ATOM 24 C4 G A 234 93.200 113.973 -3.948 1.00 55.08 C
ATOM 25 P A A 235 93.995 118.242 -9.444 1.00 57.11 P
ATOM 26 OP1 A A 235 93.495 117.656 -10.719 1.00 58.67 O
ATOM 27 OP2 A A 235 95.452 118.472 -9.266 1.00 56.50 O
ATOM 28 O5' A A 235 93.207 119.598 -9.165 1.00 55.87 O
TER
ATOM 1 O3' U B 251 96.223 118.064 6.494 1.00 41.36 O
ATOM 2 P G B 252 94.941 117.290 5.910 1.00 41.12 P
ATOM 3 OP1 G B 252 93.751 117.641 6.720 1.00 43.77 O
ATOM 4 OP2 G B 252 95.294 115.867 5.707 1.00 41.55 O
ATOM 5 O5' G B 252 94.746 117.938 4.477 1.00 42.61 O
ATOM 6 C5' G B 252 94.231 119.258 4.335 1.00 42.86 C
ATOM 7 C4' G B 252 93.187 119.259 3.258 1.00 45.12 C
ATOM 8 O4' G B 252 93.831 118.885 2.011 1.00 45.96 O
ATOM 9 C3' G B 252 92.074 118.246 3.485 1.00 45.33 C
ATOM 10 O3' G B 252 90.841 118.726 2.988 1.00 46.01 O
ATOM 11 C2' G B 252 92.561 117.010 2.736 1.00 45.49 C
ATOM 12 O2' G B 252 91.483 116.224 2.254 1.00 44.89 O
ATOM 13 C1' G B 252 93.376 117.614 1.588 1.00 45.96 C
ATOM 14 N9 G B 252 94.550 116.806 1.251 1.00 46.11 N
ATOM 15 C8 G B 252 95.357 116.111 2.125 1.00 45.64 C
ATOM 16 N7 G B 252 96.291 115.421 1.526 1.00 44.24 N
ATOM 17 C5 G B 252 96.103 115.682 0.175 1.00 45.64 C
ATOM 18 C6 G B 252 96.801 115.188 -0.965 1.00 46.14 C
ATOM 19 O6 G B 252 97.737 114.370 -1.006 1.00 46.84 O
ATOM 20 N1 G B 252 96.300 115.729 -2.146 1.00 45.49 N
ATOM 21 C2 G B 252 95.252 116.616 -2.228 1.00 47.30 C
ATOM 22 N2 G B 252 94.924 117.036 -3.464 1.00 46.61 N
ATOM 23 N3 G B 252 94.575 117.064 -1.176 1.00 47.57 N
ATOM 24 C4 G B 252 95.051 116.558 -0.014 1.00 46.43 C
ATOM 25 P U B 253 89.528 118.608 3.904 1.00 47.71 P
ATOM 26 OP1 U B 253 89.886 119.171 5.237 1.00 46.49 O
ATOM 27 OP2 U B 253 89.013 117.216 3.814 1.00 46.56 O
ATOM 28 O5' U B 253 88.476 119.573 3.191 1.00 46.76 O
TER
ATOM 2 P G A 234 93.617 111.768 -9.981 1.00 56.38 P
ATOM 3 OP1 G A 234 93.901 112.114 -11.409 1.00 58.36 O
ATOM 4 OP2 G A 234 94.533 110.845 -9.251 1.00 53.37 O
ATOM 5 O5' G A 234 93.471 113.124 -9.159 1.00 55.32 O
ATOM 6 C5' G A 234 92.328 113.978 -9.364 1.00 55.00 C
ATOM 7 C4' G A 234 92.383 115.158 -8.428 1.00 55.91 C
ATOM 8 O4' G A 234 92.120 114.712 -7.067 1.00 56.64 O
ATOM 9 C3' G A 234 93.723 115.880 -8.393 1.00 55.92 C
ATOM 10 O3' G A 234 93.516 117.271 -8.263 1.00 57.28 O
ATOM 11 C2' G A 234 94.395 115.295 -7.157 1.00 55.66 C
ATOM 12 O2' G A 234 95.345 116.149 -6.550 1.00 55.36 O
ATOM 13 C1' G A 234 93.202 115.067 -6.233 1.00 55.49 C
ATOM 14 N9 G A 234 93.451 113.973 -5.299 1.00 54.94 N
ATOM 15 C8 G A 234 94.028 112.759 -5.586 1.00 55.65 C
ATOM 16 N7 G A 234 94.200 112.011 -4.532 1.00 57.07 N
ATOM 17 C5 G A 234 93.689 112.770 -3.487 1.00 56.00 C
ATOM 18 C6 G A 234 93.618 112.488 -2.098 1.00 55.76 C
ATOM 19 O6 G A 234 94.020 111.484 -1.494 1.00 55.07 O
ATOM 20 N1 G A 234 93.017 113.527 -1.397 1.00 55.28 N
ATOM 21 C2 G A 234 92.551 114.691 -1.956 1.00 55.96 C
ATOM 22 N2 G A 234 92.001 115.575 -1.108 1.00 56.21 N
ATOM 23 N3 G A 234 92.620 114.970 -3.248 1.00 55.38 N
ATOM 24 C4 G A 234 93.200 113.973 -3.948 1.00 55.08 C
ATOM 25 P A A 235 93.995 118.242 -9.444 1.00 57.11 P
ATOM 26 OP1 A A 235 93.495 117.656 -10.719 1.00 58.67 O
ATOM 27 OP2 A A 235 95.452 118.472 -9.266 1.00 56.50 O
ATOM 28 O5' A A 235 93.207 119.598 -9.165 1.00 55.87 O
TER
ATOM 1 O3' U B 251 96.223 118.064 6.494 1.00 41.36 O
ATOM 2 P G B 252 94.941 117.290 5.910 1.00 41.12 P
ATOM 3 OP1 G B 252 93.751 117.641 6.720 1.00 43.77 O
ATOM 4 OP2 G B 252 95.294 115.867 5.707 1.00 41.55 O
ATOM 5 O5' G B 252 94.746 117.938 4.477 1.00 42.61 O
ATOM 6 C5' G B 252 94.231 119.258 4.335 1.00 42.86 C
ATOM 7 C4' G B 252 93.187 119.259 3.258 1.00 45.12 C
ATOM 8 O4' G B 252 93.831 118.885 2.011 1.00 45.96 O
ATOM 9 C3' G B 252 92.074 118.246 3.485 1.00 45.33 C
ATOM 10 O3' G B 252 90.841 118.726 2.988 1.00 46.01 O
ATOM 11 C2' G B 252 92.561 117.010 2.736 1.00 45.49 C
ATOM 12 O2' G B 252 91.483 116.224 2.254 1.00 44.89 O
ATOM 13 C1' G B 252 93.376 117.614 1.588 1.00 45.96 C
ATOM 14 N9 G B 252 94.550 116.806 1.251 1.00 46.11 N
ATOM 15 C8 G B 252 95.357 116.111 2.125 1.00 45.64 C
ATOM 16 N7 G B 252 96.291 115.421 1.526 1.00 44.24 N
ATOM 17 C5 G B 252 96.103 115.682 0.175 1.00 45.64 C
ATOM 18 C6 G B 252 96.801 115.188 -0.965 1.00 46.14 C
ATOM 19 O6 G B 252 97.737 114.370 -1.006 1.00 46.84 O
ATOM 20 N1 G B 252 96.300 115.729 -2.146 1.00 45.49 N
ATOM 21 C2 G B 252 95.252 116.616 -2.228 1.00 47.30 C
ATOM 22 N2 G B 252 94.924 117.036 -3.464 1.00 46.61 N
ATOM 23 N3 G B 252 94.575 117.064 -1.176 1.00 47.57 N
ATOM 24 C4 G B 252 95.051 116.558 -0.014 1.00 46.43 C
ATOM 25 P U B 253 89.528 118.608 3.904 1.00 47.71 P
ATOM 26 OP1 U B 253 89.886 119.171 5.237 1.00 46.49 O
ATOM 27 OP2 U B 253 89.013 117.216 3.814 1.00 46.56 O
ATOM 28 O5' U B 253 88.476 119.573 3.191 1.00 46.76 O
TER
Atoms:
OP1: (93.901,112.114,-11.409)
OP2: (94.533,110.845,-9.251)
C3': (93.723,115.880,-8.393)
C1': (93.202,115.067,-6.233)
C5': (92.328,113.978,-9.364)
O6: (94.020,111.484,-1.494)
O4': (92.120,114.712,-7.067)
C8: (94.028,112.759,-5.586)
C2: (92.551,114.691,-1.956)
C6: (93.618,112.488,-2.098)
C5: (93.689,112.770,-3.487)
C4: (93.200,113.973,-3.948)
P: (93.617,111.768,-9.981)
C4': (92.383,115.158,-8.428)
C2': (94.395,115.295,-7.157)
O2': (95.345,116.149,-6.550)
N1: (93.017,113.527,-1.397)
N2: (92.001,115.575,-1.108)
N3: (92.620,114.970,-3.248)
N7: (94.200,112.011,-4.532)
N9: (93.451,113.973,-5.299)
O5': (93.471,113.124,-9.159)
O3': (93.516,117.271,-8.263)
OP2: (94.533,110.845,-9.251)
C3': (93.723,115.880,-8.393)
C1': (93.202,115.067,-6.233)
C5': (92.328,113.978,-9.364)
O6: (94.020,111.484,-1.494)
O4': (92.120,114.712,-7.067)
C8: (94.028,112.759,-5.586)
C2: (92.551,114.691,-1.956)
C6: (93.618,112.488,-2.098)
C5: (93.689,112.770,-3.487)
C4: (93.200,113.973,-3.948)
P: (93.617,111.768,-9.981)
C4': (92.383,115.158,-8.428)
C2': (94.395,115.295,-7.157)
O2': (95.345,116.149,-6.550)
N1: (93.017,113.527,-1.397)
N2: (92.001,115.575,-1.108)
N3: (92.620,114.970,-3.248)
N7: (94.200,112.011,-4.532)
N9: (93.451,113.973,-5.299)
O5': (93.471,113.124,-9.159)
O3': (93.516,117.271,-8.263)
OP1: (93.751,117.641,6.720)
OP2: (95.294,115.867,5.707)
C3': (92.074,118.246,3.485)
C1': (93.376,117.614,1.588)
C5': (94.231,119.258,4.335)
O6: (97.737,114.370,-1.006)
O4': (93.831,118.885,2.011)
C8: (95.357,116.111,2.125)
C2: (95.252,116.616,-2.228)
C6: (96.801,115.188,-0.965)
C5: (96.103,115.682,0.175)
C4: (95.051,116.558,-0.014)
P: (94.941,117.290,5.910)
C4': (93.187,119.259,3.258)
C2': (92.561,117.010,2.736)
O2': (91.483,116.224,2.254)
N1: (96.300,115.729,-2.146)
N2: (94.924,117.036,-3.464)
N3: (94.575,117.064,-1.176)
N7: (96.291,115.421,1.526)
N9: (94.550,116.806,1.251)
O5': (94.746,117.938,4.477)
O3': (90.841,118.726,2.988)
OP2: (95.294,115.867,5.707)
C3': (92.074,118.246,3.485)
C1': (93.376,117.614,1.588)
C5': (94.231,119.258,4.335)
O6: (97.737,114.370,-1.006)
O4': (93.831,118.885,2.011)
C8: (95.357,116.111,2.125)
C2: (95.252,116.616,-2.228)
C6: (96.801,115.188,-0.965)
C5: (96.103,115.682,0.175)
C4: (95.051,116.558,-0.014)
P: (94.941,117.290,5.910)
C4': (93.187,119.259,3.258)
C2': (92.561,117.010,2.736)
O2': (91.483,116.224,2.254)
N1: (96.300,115.729,-2.146)
N2: (94.924,117.036,-3.464)
N3: (94.575,117.064,-1.176)
N7: (96.291,115.421,1.526)
N9: (94.550,116.806,1.251)
O5': (94.746,117.938,4.477)
O3': (90.841,118.726,2.988)
Image (generated by PyMOL):