ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:02649:02513

Extra

PDB:
ATOM 1 O3' G A2648 39.142 147.416 127.253 1.00 38.16 O
ATOM 2 P G A2649 37.789 148.261 127.384 1.00 39.50 P
ATOM 3 OP1 G A2649 37.577 148.904 126.062 1.00 40.61 O
ATOM 4 OP2 G A2649 37.840 149.099 128.605 1.00 40.47 O
ATOM 5 O5' G A2649 36.679 147.130 127.599 1.00 41.06 O
ATOM 6 C5' G A2649 36.347 146.222 126.525 1.00 38.73 C
ATOM 7 C4' G A2649 35.501 145.081 127.034 1.00 38.06 C
ATOM 8 O4' G A2649 36.245 144.313 128.007 1.00 37.54 O
ATOM 9 C3' G A2649 34.231 145.452 127.777 1.00 39.67 C
ATOM 10 O3' G A2649 33.197 145.759 126.877 1.00 41.98 O
ATOM 11 C2' G A2649 33.942 144.177 128.552 1.00 38.23 C
ATOM 12 O2' G A2649 33.394 143.141 127.769 1.00 37.89 O
ATOM 13 C1' G A2649 35.352 143.785 128.978 1.00 36.86 C
ATOM 14 N9 G A2649 35.661 144.408 130.255 1.00 34.71 N
ATOM 15 C8 G A2649 36.358 145.570 130.461 1.00 34.28 C
ATOM 16 N7 G A2649 36.469 145.877 131.721 1.00 35.84 N
ATOM 17 C5 G A2649 35.805 144.854 132.382 1.00 33.16 C
ATOM 18 C6 G A2649 35.615 144.639 133.750 1.00 33.56 C
ATOM 19 O6 G A2649 36.020 145.326 134.695 1.00 38.43 O
ATOM 20 N1 G A2649 34.882 143.482 133.991 1.00 33.58 N
ATOM 21 C2 G A2649 34.412 142.632 133.021 1.00 33.45 C
ATOM 22 N2 G A2649 33.734 141.538 133.439 1.00 32.18 N
ATOM 23 N3 G A2649 34.595 142.829 131.734 1.00 33.46 N
ATOM 24 C4 G A2649 35.297 143.947 131.490 1.00 32.22 C
ATOM 25 P A A2650 31.937 146.627 127.364 1.00 45.75 P
ATOM 26 OP1 A A2650 32.357 148.041 127.598 1.00 45.21 O
ATOM 27 OP2 A A2650 31.254 145.868 128.454 1.00 43.38 O
ATOM 28 O5' A A2650 31.041 146.593 126.052 1.00 44.67 O
TER

ATOM 1 O3' U B2512 28.746 144.263 139.639 1.00 40.17 O
ATOM 2 P G B2513 29.870 143.166 139.970 1.00 40.97 P
ATOM 3 OP1 G B2513 29.318 142.241 140.996 1.00 40.64 O
ATOM 4 OP2 G B2513 31.146 143.871 140.231 1.00 40.25 O
ATOM 5 O5' G B2513 30.009 142.348 138.617 1.00 40.30 O
ATOM 6 C5' G B2513 28.946 141.498 138.157 1.00 41.81 C
ATOM 7 C4' G B2513 29.404 140.733 136.942 1.00 42.56 C
ATOM 8 O4' G B2513 29.528 141.648 135.811 1.00 42.15 O
ATOM 9 C3' G B2513 30.777 140.095 137.120 1.00 43.03 C
ATOM 10 O3' G B2513 30.844 138.902 136.377 1.00 46.77 O
ATOM 11 C2' G B2513 31.703 141.141 136.518 1.00 41.38 C
ATOM 12 O2' G B2513 32.944 140.638 136.084 1.00 41.66 O
ATOM 13 C1' G B2513 30.862 141.638 135.347 1.00 40.56 C
ATOM 14 N9 G B2513 31.227 142.976 134.893 1.00 37.41 N
ATOM 15 C8 G B2513 31.764 143.997 135.645 1.00 35.90 C
ATOM 16 N7 G B2513 32.071 145.049 134.934 1.00 36.47 N
ATOM 17 C5 G B2513 31.699 144.710 133.639 1.00 35.63 C
ATOM 18 C6 G B2513 31.812 145.441 132.434 1.00 36.38 C
ATOM 19 O6 G B2513 32.286 146.567 132.260 1.00 40.01 O
ATOM 20 N1 G B2513 31.308 144.731 131.350 1.00 35.08 N
ATOM 21 C2 G B2513 30.765 143.475 131.413 1.00 34.89 C
ATOM 22 N2 G B2513 30.325 142.966 130.246 1.00 32.96 N
ATOM 23 N3 G B2513 30.660 142.772 132.533 1.00 36.08 N
ATOM 24 C4 G B2513 31.149 143.447 133.600 1.00 36.37 C
ATOM 25 P A B2514 31.817 137.722 136.856 1.00 49.95 P
ATOM 26 OP1 A B2514 31.438 137.315 138.234 1.00 50.98 O
ATOM 27 OP2 A B2514 33.216 138.126 136.568 1.00 48.52 O
ATOM 28 O5' A B2514 31.403 136.529 135.888 1.00 49.43 O
TER

Atoms:
OP1: (37.577,148.904,126.062)
OP2: (37.840,149.099,128.605)
C3': (34.231,145.452,127.777)
C1': (35.352,143.785,128.978)
C5': (36.347,146.222,126.525)
O6: (36.020,145.326,134.695)
O4': (36.245,144.313,128.007)
C8: (36.358,145.570,130.461)
C2: (34.412,142.632,133.021)
C6: (35.615,144.639,133.750)
C5: (35.805,144.854,132.382)
C4: (35.297,143.947,131.490)
P: (37.789,148.261,127.384)
C4': (35.501,145.081,127.034)
C2': (33.942,144.177,128.552)
O2': (33.394,143.141,127.769)
N1: (34.882,143.482,133.991)
N2: (33.734,141.538,133.439)
N3: (34.595,142.829,131.734)
N7: (36.469,145.877,131.721)
N9: (35.661,144.408,130.255)
O5': (36.679,147.130,127.599)
O3': (33.197,145.759,126.877)
OP1: (29.318,142.241,140.996)
OP2: (31.146,143.871,140.231)
C3': (30.777,140.095,137.120)
C1': (30.862,141.638,135.347)
C5': (28.946,141.498,138.157)
O6: (32.286,146.567,132.260)
O4': (29.528,141.648,135.811)
C8: (31.764,143.997,135.645)
C2: (30.765,143.475,131.413)
C6: (31.812,145.441,132.434)
C5: (31.699,144.710,133.639)
C4: (31.149,143.447,133.600)
P: (29.870,143.166,139.970)
C4': (29.404,140.733,136.942)
C2': (31.703,141.141,136.518)
O2': (32.944,140.638,136.084)
N1: (31.308,144.731,131.350)
N2: (30.325,142.966,130.246)
N3: (30.660,142.772,132.533)
N7: (32.071,145.049,134.934)
N9: (31.227,142.976,134.893)
O5': (30.009,142.348,138.617)
O3': (30.844,138.902,136.377)
Image (generated by PyMOL):
PyMOL image
show in jmol