Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0234:0252
Extra
PDB:
ATOM 1 O3' C A 233 92.232 111.273 -9.953 1.00 60.32 O
ATOM 2 P G A 234 93.715 111.885 -9.949 1.00 62.01 P
ATOM 3 OP1 G A 234 94.051 112.304 -11.342 1.00 63.56 O
ATOM 4 OP2 G A 234 94.606 110.920 -9.238 1.00 59.88 O
ATOM 5 O5' G A 234 93.543 113.192 -9.056 1.00 59.87 O
ATOM 6 C5' G A 234 92.392 114.045 -9.230 1.00 59.12 C
ATOM 7 C4' G A 234 92.473 115.230 -8.304 1.00 58.73 C
ATOM 8 O4' G A 234 92.237 114.794 -6.937 1.00 58.89 O
ATOM 9 C3' G A 234 93.816 115.946 -8.298 1.00 58.75 C
ATOM 10 O3' G A 234 93.614 117.339 -8.177 1.00 59.63 O
ATOM 11 C2' G A 234 94.513 115.364 -7.074 1.00 57.55 C
ATOM 12 O2' G A 234 95.475 116.224 -6.498 1.00 56.62 O
ATOM 13 C1' G A 234 93.339 115.145 -6.127 1.00 57.59 C
ATOM 14 N9 G A 234 93.582 114.055 -5.189 1.00 56.88 N
ATOM 15 C8 G A 234 94.135 112.827 -5.467 1.00 56.87 C
ATOM 16 N7 G A 234 94.278 112.079 -4.409 1.00 57.68 N
ATOM 17 C5 G A 234 93.779 112.855 -3.371 1.00 57.33 C
ATOM 18 C6 G A 234 93.691 112.583 -1.982 1.00 57.70 C
ATOM 19 O6 G A 234 94.061 111.573 -1.368 1.00 58.01 O
ATOM 20 N1 G A 234 93.112 113.643 -1.292 1.00 58.02 N
ATOM 21 C2 G A 234 92.684 114.818 -1.862 1.00 57.68 C
ATOM 22 N2 G A 234 92.153 115.725 -1.026 1.00 58.33 N
ATOM 23 N3 G A 234 92.772 115.087 -3.152 1.00 56.96 N
ATOM 24 C4 G A 234 93.327 114.069 -3.841 1.00 56.72 C
ATOM 25 P A A 235 94.090 118.297 -9.370 1.00 59.96 P
ATOM 26 OP1 A A 235 93.596 117.698 -10.640 1.00 60.33 O
ATOM 27 OP2 A A 235 95.551 118.520 -9.184 1.00 58.52 O
ATOM 28 O5' A A 235 93.290 119.650 -9.115 1.00 58.32 O
TER
ATOM 1 O3' U B 251 96.355 118.118 6.476 1.00 41.91 O
ATOM 2 P G B 252 95.112 117.316 5.842 1.00 42.12 P
ATOM 3 OP1 G B 252 93.866 117.615 6.581 1.00 43.19 O
ATOM 4 OP2 G B 252 95.529 115.908 5.654 1.00 41.59 O
ATOM 5 O5' G B 252 94.963 117.972 4.404 1.00 43.31 O
ATOM 6 C5' G B 252 94.568 119.341 4.259 1.00 44.74 C
ATOM 7 C4' G B 252 93.483 119.438 3.225 1.00 46.34 C
ATOM 8 O4' G B 252 94.031 119.058 1.933 1.00 47.55 O
ATOM 9 C3' G B 252 92.314 118.497 3.477 1.00 47.40 C
ATOM 10 O3' G B 252 91.083 119.047 3.040 1.00 47.37 O
ATOM 11 C2' G B 252 92.708 117.238 2.707 1.00 47.46 C
ATOM 12 O2' G B 252 91.595 116.473 2.285 1.00 47.52 O
ATOM 13 C1' G B 252 93.507 117.803 1.528 1.00 47.82 C
ATOM 14 N9 G B 252 94.636 116.943 1.168 1.00 48.71 N
ATOM 15 C8 G B 252 95.416 116.200 2.029 1.00 48.09 C
ATOM 16 N7 G B 252 96.329 115.495 1.419 1.00 47.26 N
ATOM 17 C5 G B 252 96.154 115.788 0.072 1.00 47.77 C
ATOM 18 C6 G B 252 96.848 115.301 -1.071 1.00 48.15 C
ATOM 19 O6 G B 252 97.773 114.470 -1.120 1.00 47.96 O
ATOM 20 N1 G B 252 96.362 115.873 -2.246 1.00 48.24 N
ATOM 21 C2 G B 252 95.331 116.784 -2.317 1.00 48.95 C
ATOM 22 N2 G B 252 95.013 117.223 -3.546 1.00 48.11 N
ATOM 23 N3 G B 252 94.663 117.233 -1.259 1.00 49.12 N
ATOM 24 C4 G B 252 95.125 116.695 -0.103 1.00 48.79 C
ATOM 25 P U B 253 89.748 118.735 3.881 1.00 49.19 P
ATOM 26 OP1 U B 253 89.978 119.222 5.272 1.00 48.79 O
ATOM 27 OP2 U B 253 89.399 117.307 3.658 1.00 48.06 O
ATOM 28 O5' U B 253 88.630 119.646 3.193 1.00 48.47 O
TER
ATOM 2 P G A 234 93.715 111.885 -9.949 1.00 62.01 P
ATOM 3 OP1 G A 234 94.051 112.304 -11.342 1.00 63.56 O
ATOM 4 OP2 G A 234 94.606 110.920 -9.238 1.00 59.88 O
ATOM 5 O5' G A 234 93.543 113.192 -9.056 1.00 59.87 O
ATOM 6 C5' G A 234 92.392 114.045 -9.230 1.00 59.12 C
ATOM 7 C4' G A 234 92.473 115.230 -8.304 1.00 58.73 C
ATOM 8 O4' G A 234 92.237 114.794 -6.937 1.00 58.89 O
ATOM 9 C3' G A 234 93.816 115.946 -8.298 1.00 58.75 C
ATOM 10 O3' G A 234 93.614 117.339 -8.177 1.00 59.63 O
ATOM 11 C2' G A 234 94.513 115.364 -7.074 1.00 57.55 C
ATOM 12 O2' G A 234 95.475 116.224 -6.498 1.00 56.62 O
ATOM 13 C1' G A 234 93.339 115.145 -6.127 1.00 57.59 C
ATOM 14 N9 G A 234 93.582 114.055 -5.189 1.00 56.88 N
ATOM 15 C8 G A 234 94.135 112.827 -5.467 1.00 56.87 C
ATOM 16 N7 G A 234 94.278 112.079 -4.409 1.00 57.68 N
ATOM 17 C5 G A 234 93.779 112.855 -3.371 1.00 57.33 C
ATOM 18 C6 G A 234 93.691 112.583 -1.982 1.00 57.70 C
ATOM 19 O6 G A 234 94.061 111.573 -1.368 1.00 58.01 O
ATOM 20 N1 G A 234 93.112 113.643 -1.292 1.00 58.02 N
ATOM 21 C2 G A 234 92.684 114.818 -1.862 1.00 57.68 C
ATOM 22 N2 G A 234 92.153 115.725 -1.026 1.00 58.33 N
ATOM 23 N3 G A 234 92.772 115.087 -3.152 1.00 56.96 N
ATOM 24 C4 G A 234 93.327 114.069 -3.841 1.00 56.72 C
ATOM 25 P A A 235 94.090 118.297 -9.370 1.00 59.96 P
ATOM 26 OP1 A A 235 93.596 117.698 -10.640 1.00 60.33 O
ATOM 27 OP2 A A 235 95.551 118.520 -9.184 1.00 58.52 O
ATOM 28 O5' A A 235 93.290 119.650 -9.115 1.00 58.32 O
TER
ATOM 1 O3' U B 251 96.355 118.118 6.476 1.00 41.91 O
ATOM 2 P G B 252 95.112 117.316 5.842 1.00 42.12 P
ATOM 3 OP1 G B 252 93.866 117.615 6.581 1.00 43.19 O
ATOM 4 OP2 G B 252 95.529 115.908 5.654 1.00 41.59 O
ATOM 5 O5' G B 252 94.963 117.972 4.404 1.00 43.31 O
ATOM 6 C5' G B 252 94.568 119.341 4.259 1.00 44.74 C
ATOM 7 C4' G B 252 93.483 119.438 3.225 1.00 46.34 C
ATOM 8 O4' G B 252 94.031 119.058 1.933 1.00 47.55 O
ATOM 9 C3' G B 252 92.314 118.497 3.477 1.00 47.40 C
ATOM 10 O3' G B 252 91.083 119.047 3.040 1.00 47.37 O
ATOM 11 C2' G B 252 92.708 117.238 2.707 1.00 47.46 C
ATOM 12 O2' G B 252 91.595 116.473 2.285 1.00 47.52 O
ATOM 13 C1' G B 252 93.507 117.803 1.528 1.00 47.82 C
ATOM 14 N9 G B 252 94.636 116.943 1.168 1.00 48.71 N
ATOM 15 C8 G B 252 95.416 116.200 2.029 1.00 48.09 C
ATOM 16 N7 G B 252 96.329 115.495 1.419 1.00 47.26 N
ATOM 17 C5 G B 252 96.154 115.788 0.072 1.00 47.77 C
ATOM 18 C6 G B 252 96.848 115.301 -1.071 1.00 48.15 C
ATOM 19 O6 G B 252 97.773 114.470 -1.120 1.00 47.96 O
ATOM 20 N1 G B 252 96.362 115.873 -2.246 1.00 48.24 N
ATOM 21 C2 G B 252 95.331 116.784 -2.317 1.00 48.95 C
ATOM 22 N2 G B 252 95.013 117.223 -3.546 1.00 48.11 N
ATOM 23 N3 G B 252 94.663 117.233 -1.259 1.00 49.12 N
ATOM 24 C4 G B 252 95.125 116.695 -0.103 1.00 48.79 C
ATOM 25 P U B 253 89.748 118.735 3.881 1.00 49.19 P
ATOM 26 OP1 U B 253 89.978 119.222 5.272 1.00 48.79 O
ATOM 27 OP2 U B 253 89.399 117.307 3.658 1.00 48.06 O
ATOM 28 O5' U B 253 88.630 119.646 3.193 1.00 48.47 O
TER
Atoms:
OP1: (94.051,112.304,-11.342)
OP2: (94.606,110.920,-9.238)
C3': (93.816,115.946,-8.298)
C1': (93.339,115.145,-6.127)
C5': (92.392,114.045,-9.230)
O6: (94.061,111.573,-1.368)
O4': (92.237,114.794,-6.937)
C8: (94.135,112.827,-5.467)
C2: (92.684,114.818,-1.862)
C6: (93.691,112.583,-1.982)
C5: (93.779,112.855,-3.371)
C4: (93.327,114.069,-3.841)
P: (93.715,111.885,-9.949)
C4': (92.473,115.230,-8.304)
C2': (94.513,115.364,-7.074)
O2': (95.475,116.224,-6.498)
N1: (93.112,113.643,-1.292)
N2: (92.153,115.725,-1.026)
N3: (92.772,115.087,-3.152)
N7: (94.278,112.079,-4.409)
N9: (93.582,114.055,-5.189)
O5': (93.543,113.192,-9.056)
O3': (93.614,117.339,-8.177)
OP2: (94.606,110.920,-9.238)
C3': (93.816,115.946,-8.298)
C1': (93.339,115.145,-6.127)
C5': (92.392,114.045,-9.230)
O6: (94.061,111.573,-1.368)
O4': (92.237,114.794,-6.937)
C8: (94.135,112.827,-5.467)
C2: (92.684,114.818,-1.862)
C6: (93.691,112.583,-1.982)
C5: (93.779,112.855,-3.371)
C4: (93.327,114.069,-3.841)
P: (93.715,111.885,-9.949)
C4': (92.473,115.230,-8.304)
C2': (94.513,115.364,-7.074)
O2': (95.475,116.224,-6.498)
N1: (93.112,113.643,-1.292)
N2: (92.153,115.725,-1.026)
N3: (92.772,115.087,-3.152)
N7: (94.278,112.079,-4.409)
N9: (93.582,114.055,-5.189)
O5': (93.543,113.192,-9.056)
O3': (93.614,117.339,-8.177)
OP1: (93.866,117.615,6.581)
OP2: (95.529,115.908,5.654)
C3': (92.314,118.497,3.477)
C1': (93.507,117.803,1.528)
C5': (94.568,119.341,4.259)
O6: (97.773,114.470,-1.120)
O4': (94.031,119.058,1.933)
C8: (95.416,116.200,2.029)
C2: (95.331,116.784,-2.317)
C6: (96.848,115.301,-1.071)
C5: (96.154,115.788,0.072)
C4: (95.125,116.695,-0.103)
P: (95.112,117.316,5.842)
C4': (93.483,119.438,3.225)
C2': (92.708,117.238,2.707)
O2': (91.595,116.473,2.285)
N1: (96.362,115.873,-2.246)
N2: (95.013,117.223,-3.546)
N3: (94.663,117.233,-1.259)
N7: (96.329,115.495,1.419)
N9: (94.636,116.943,1.168)
O5': (94.963,117.972,4.404)
O3': (91.083,119.047,3.040)
OP2: (95.529,115.908,5.654)
C3': (92.314,118.497,3.477)
C1': (93.507,117.803,1.528)
C5': (94.568,119.341,4.259)
O6: (97.773,114.470,-1.120)
O4': (94.031,119.058,1.933)
C8: (95.416,116.200,2.029)
C2: (95.331,116.784,-2.317)
C6: (96.848,115.301,-1.071)
C5: (96.154,115.788,0.072)
C4: (95.125,116.695,-0.103)
P: (95.112,117.316,5.842)
C4': (93.483,119.438,3.225)
C2': (92.708,117.238,2.707)
O2': (91.595,116.473,2.285)
N1: (96.362,115.873,-2.246)
N2: (95.013,117.223,-3.546)
N3: (94.663,117.233,-1.259)
N7: (96.329,115.495,1.419)
N9: (94.636,116.943,1.168)
O5': (94.963,117.972,4.404)
O3': (91.083,119.047,3.040)
Image (generated by PyMOL):