Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0234:0252
Extra
PDB:
ATOM 1 O3' C A 233 92.137 111.236 -9.873 1.00 62.07 O
ATOM 2 P G A 234 93.611 111.872 -9.941 1.00 63.40 P
ATOM 3 OP1 G A 234 93.881 112.261 -11.360 1.00 65.78 O
ATOM 4 OP2 G A 234 94.548 110.954 -9.244 1.00 59.99 O
ATOM 5 O5' G A 234 93.454 113.202 -9.084 1.00 61.93 O
ATOM 6 C5' G A 234 92.314 114.061 -9.285 1.00 62.01 C
ATOM 7 C4' G A 234 92.368 115.232 -8.340 1.00 61.98 C
ATOM 8 O4' G A 234 92.156 114.752 -6.982 1.00 62.29 O
ATOM 9 C3' G A 234 93.693 115.985 -8.331 1.00 61.80 C
ATOM 10 O3' G A 234 93.479 117.381 -8.215 1.00 62.79 O
ATOM 11 C2' G A 234 94.407 115.413 -7.114 1.00 60.84 C
ATOM 12 O2' G A 234 95.342 116.293 -6.526 1.00 59.79 O
ATOM 13 C1' G A 234 93.242 115.137 -6.168 1.00 61.00 C
ATOM 14 N9 G A 234 93.545 114.045 -5.248 1.00 60.08 N
ATOM 15 C8 G A 234 94.187 112.869 -5.549 1.00 60.48 C
ATOM 16 N7 G A 234 94.407 112.124 -4.503 1.00 61.36 N
ATOM 17 C5 G A 234 93.858 112.841 -3.449 1.00 60.47 C
ATOM 18 C6 G A 234 93.818 112.547 -2.062 1.00 59.65 C
ATOM 19 O6 G A 234 94.296 111.572 -1.468 1.00 59.20 O
ATOM 20 N1 G A 234 93.151 113.538 -1.350 1.00 58.64 N
ATOM 21 C2 G A 234 92.605 114.673 -1.898 1.00 58.52 C
ATOM 22 N2 G A 234 91.989 115.505 -1.045 1.00 57.96 N
ATOM 23 N3 G A 234 92.657 114.969 -3.187 1.00 58.07 N
ATOM 24 C4 G A 234 93.294 114.016 -3.898 1.00 59.21 C
ATOM 25 P A A 235 93.986 118.345 -9.396 1.00 62.73 P
ATOM 26 OP1 A A 235 93.506 117.756 -10.672 1.00 63.54 O
ATOM 27 OP2 A A 235 95.443 118.576 -9.198 1.00 60.77 O
ATOM 28 O5' A A 235 93.191 119.701 -9.150 1.00 61.12 O
TER
ATOM 1 O3' U B 251 96.320 118.046 6.544 1.00 44.74 O
ATOM 2 P G B 252 94.976 117.414 5.934 1.00 44.16 P
ATOM 3 OP1 G B 252 93.825 117.804 6.780 1.00 45.46 O
ATOM 4 OP2 G B 252 95.225 115.984 5.656 1.00 44.51 O
ATOM 5 O5' G B 252 94.839 118.147 4.535 1.00 45.74 O
ATOM 6 C5' G B 252 94.236 119.431 4.426 1.00 45.86 C
ATOM 7 C4' G B 252 93.221 119.399 3.320 1.00 48.33 C
ATOM 8 O4' G B 252 93.908 119.003 2.098 1.00 49.80 O
ATOM 9 C3' G B 252 92.116 118.374 3.537 1.00 48.50 C
ATOM 10 O3' G B 252 90.888 118.834 3.008 1.00 47.94 O
ATOM 11 C2' G B 252 92.625 117.140 2.802 1.00 48.15 C
ATOM 12 O2' G B 252 91.564 116.342 2.319 1.00 47.02 O
ATOM 13 C1' G B 252 93.429 117.749 1.653 1.00 49.01 C
ATOM 14 N9 G B 252 94.586 116.927 1.301 1.00 51.15 N
ATOM 15 C8 G B 252 95.390 116.218 2.167 1.00 50.75 C
ATOM 16 N7 G B 252 96.313 115.525 1.561 1.00 50.17 N
ATOM 17 C5 G B 252 96.121 115.796 0.212 1.00 52.43 C
ATOM 18 C6 G B 252 96.816 115.310 -0.934 1.00 54.08 C
ATOM 19 O6 G B 252 97.760 114.502 -0.982 1.00 53.95 O
ATOM 20 N1 G B 252 96.306 115.855 -2.110 1.00 53.71 N
ATOM 21 C2 G B 252 95.263 116.748 -2.179 1.00 54.65 C
ATOM 22 N2 G B 252 94.932 117.176 -3.409 1.00 54.94 N
ATOM 23 N3 G B 252 94.595 117.195 -1.122 1.00 53.39 N
ATOM 24 C4 G B 252 95.074 116.679 0.033 1.00 52.39 C
ATOM 25 P U B 253 89.559 118.706 3.896 1.00 49.59 P
ATOM 26 OP1 U B 253 89.890 119.266 5.230 1.00 47.42 O
ATOM 27 OP2 U B 253 89.044 117.317 3.793 1.00 48.84 O
ATOM 28 O5' U B 253 88.519 119.672 3.169 1.00 48.66 O
TER
ATOM 2 P G A 234 93.611 111.872 -9.941 1.00 63.40 P
ATOM 3 OP1 G A 234 93.881 112.261 -11.360 1.00 65.78 O
ATOM 4 OP2 G A 234 94.548 110.954 -9.244 1.00 59.99 O
ATOM 5 O5' G A 234 93.454 113.202 -9.084 1.00 61.93 O
ATOM 6 C5' G A 234 92.314 114.061 -9.285 1.00 62.01 C
ATOM 7 C4' G A 234 92.368 115.232 -8.340 1.00 61.98 C
ATOM 8 O4' G A 234 92.156 114.752 -6.982 1.00 62.29 O
ATOM 9 C3' G A 234 93.693 115.985 -8.331 1.00 61.80 C
ATOM 10 O3' G A 234 93.479 117.381 -8.215 1.00 62.79 O
ATOM 11 C2' G A 234 94.407 115.413 -7.114 1.00 60.84 C
ATOM 12 O2' G A 234 95.342 116.293 -6.526 1.00 59.79 O
ATOM 13 C1' G A 234 93.242 115.137 -6.168 1.00 61.00 C
ATOM 14 N9 G A 234 93.545 114.045 -5.248 1.00 60.08 N
ATOM 15 C8 G A 234 94.187 112.869 -5.549 1.00 60.48 C
ATOM 16 N7 G A 234 94.407 112.124 -4.503 1.00 61.36 N
ATOM 17 C5 G A 234 93.858 112.841 -3.449 1.00 60.47 C
ATOM 18 C6 G A 234 93.818 112.547 -2.062 1.00 59.65 C
ATOM 19 O6 G A 234 94.296 111.572 -1.468 1.00 59.20 O
ATOM 20 N1 G A 234 93.151 113.538 -1.350 1.00 58.64 N
ATOM 21 C2 G A 234 92.605 114.673 -1.898 1.00 58.52 C
ATOM 22 N2 G A 234 91.989 115.505 -1.045 1.00 57.96 N
ATOM 23 N3 G A 234 92.657 114.969 -3.187 1.00 58.07 N
ATOM 24 C4 G A 234 93.294 114.016 -3.898 1.00 59.21 C
ATOM 25 P A A 235 93.986 118.345 -9.396 1.00 62.73 P
ATOM 26 OP1 A A 235 93.506 117.756 -10.672 1.00 63.54 O
ATOM 27 OP2 A A 235 95.443 118.576 -9.198 1.00 60.77 O
ATOM 28 O5' A A 235 93.191 119.701 -9.150 1.00 61.12 O
TER
ATOM 1 O3' U B 251 96.320 118.046 6.544 1.00 44.74 O
ATOM 2 P G B 252 94.976 117.414 5.934 1.00 44.16 P
ATOM 3 OP1 G B 252 93.825 117.804 6.780 1.00 45.46 O
ATOM 4 OP2 G B 252 95.225 115.984 5.656 1.00 44.51 O
ATOM 5 O5' G B 252 94.839 118.147 4.535 1.00 45.74 O
ATOM 6 C5' G B 252 94.236 119.431 4.426 1.00 45.86 C
ATOM 7 C4' G B 252 93.221 119.399 3.320 1.00 48.33 C
ATOM 8 O4' G B 252 93.908 119.003 2.098 1.00 49.80 O
ATOM 9 C3' G B 252 92.116 118.374 3.537 1.00 48.50 C
ATOM 10 O3' G B 252 90.888 118.834 3.008 1.00 47.94 O
ATOM 11 C2' G B 252 92.625 117.140 2.802 1.00 48.15 C
ATOM 12 O2' G B 252 91.564 116.342 2.319 1.00 47.02 O
ATOM 13 C1' G B 252 93.429 117.749 1.653 1.00 49.01 C
ATOM 14 N9 G B 252 94.586 116.927 1.301 1.00 51.15 N
ATOM 15 C8 G B 252 95.390 116.218 2.167 1.00 50.75 C
ATOM 16 N7 G B 252 96.313 115.525 1.561 1.00 50.17 N
ATOM 17 C5 G B 252 96.121 115.796 0.212 1.00 52.43 C
ATOM 18 C6 G B 252 96.816 115.310 -0.934 1.00 54.08 C
ATOM 19 O6 G B 252 97.760 114.502 -0.982 1.00 53.95 O
ATOM 20 N1 G B 252 96.306 115.855 -2.110 1.00 53.71 N
ATOM 21 C2 G B 252 95.263 116.748 -2.179 1.00 54.65 C
ATOM 22 N2 G B 252 94.932 117.176 -3.409 1.00 54.94 N
ATOM 23 N3 G B 252 94.595 117.195 -1.122 1.00 53.39 N
ATOM 24 C4 G B 252 95.074 116.679 0.033 1.00 52.39 C
ATOM 25 P U B 253 89.559 118.706 3.896 1.00 49.59 P
ATOM 26 OP1 U B 253 89.890 119.266 5.230 1.00 47.42 O
ATOM 27 OP2 U B 253 89.044 117.317 3.793 1.00 48.84 O
ATOM 28 O5' U B 253 88.519 119.672 3.169 1.00 48.66 O
TER
Atoms:
OP1: (93.881,112.261,-11.360)
OP2: (94.548,110.954,-9.244)
C3': (93.693,115.985,-8.331)
C1': (93.242,115.137,-6.168)
C5': (92.314,114.061,-9.285)
O6: (94.296,111.572,-1.468)
O4': (92.156,114.752,-6.982)
C8: (94.187,112.869,-5.549)
C2: (92.605,114.673,-1.898)
C6: (93.818,112.547,-2.062)
C5: (93.858,112.841,-3.449)
C4: (93.294,114.016,-3.898)
P: (93.611,111.872,-9.941)
C4': (92.368,115.232,-8.340)
C2': (94.407,115.413,-7.114)
O2': (95.342,116.293,-6.526)
N1: (93.151,113.538,-1.350)
N2: (91.989,115.505,-1.045)
N3: (92.657,114.969,-3.187)
N7: (94.407,112.124,-4.503)
N9: (93.545,114.045,-5.248)
O5': (93.454,113.202,-9.084)
O3': (93.479,117.381,-8.215)
OP2: (94.548,110.954,-9.244)
C3': (93.693,115.985,-8.331)
C1': (93.242,115.137,-6.168)
C5': (92.314,114.061,-9.285)
O6: (94.296,111.572,-1.468)
O4': (92.156,114.752,-6.982)
C8: (94.187,112.869,-5.549)
C2: (92.605,114.673,-1.898)
C6: (93.818,112.547,-2.062)
C5: (93.858,112.841,-3.449)
C4: (93.294,114.016,-3.898)
P: (93.611,111.872,-9.941)
C4': (92.368,115.232,-8.340)
C2': (94.407,115.413,-7.114)
O2': (95.342,116.293,-6.526)
N1: (93.151,113.538,-1.350)
N2: (91.989,115.505,-1.045)
N3: (92.657,114.969,-3.187)
N7: (94.407,112.124,-4.503)
N9: (93.545,114.045,-5.248)
O5': (93.454,113.202,-9.084)
O3': (93.479,117.381,-8.215)
OP1: (93.825,117.804,6.780)
OP2: (95.225,115.984,5.656)
C3': (92.116,118.374,3.537)
C1': (93.429,117.749,1.653)
C5': (94.236,119.431,4.426)
O6: (97.760,114.502,-0.982)
O4': (93.908,119.003,2.098)
C8: (95.390,116.218,2.167)
C2: (95.263,116.748,-2.179)
C6: (96.816,115.310,-0.934)
C5: (96.121,115.796,0.212)
C4: (95.074,116.679,0.033)
P: (94.976,117.414,5.934)
C4': (93.221,119.399,3.320)
C2': (92.625,117.140,2.802)
O2': (91.564,116.342,2.319)
N1: (96.306,115.855,-2.110)
N2: (94.932,117.176,-3.409)
N3: (94.595,117.195,-1.122)
N7: (96.313,115.525,1.561)
N9: (94.586,116.927,1.301)
O5': (94.839,118.147,4.535)
O3': (90.888,118.834,3.008)
OP2: (95.225,115.984,5.656)
C3': (92.116,118.374,3.537)
C1': (93.429,117.749,1.653)
C5': (94.236,119.431,4.426)
O6: (97.760,114.502,-0.982)
O4': (93.908,119.003,2.098)
C8: (95.390,116.218,2.167)
C2: (95.263,116.748,-2.179)
C6: (96.816,115.310,-0.934)
C5: (96.121,115.796,0.212)
C4: (95.074,116.679,0.033)
P: (94.976,117.414,5.934)
C4': (93.221,119.399,3.320)
C2': (92.625,117.140,2.802)
O2': (91.564,116.342,2.319)
N1: (96.306,115.855,-2.110)
N2: (94.932,117.176,-3.409)
N3: (94.595,117.195,-1.122)
N7: (96.313,115.525,1.561)
N9: (94.586,116.927,1.301)
O5': (94.839,118.147,4.535)
O3': (90.888,118.834,3.008)
Image (generated by PyMOL):